Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
Top 0.2% on spack.io
Top 0.4% dependent packages on spack.io
Top 0.4% dependent packages on spack.io
spack.io : hdf5
HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and complex data.
Registry
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Source
- JSON
purl: pkg:spack/hdf5
License: Other
Latest release: about 2 years ago
First release: about 2 years ago
Dependent packages: 161
Last synced: 9 days ago
Top 5.8% on spack.io
8 versions - Latest release: about 2 years ago - 4 dependent packages - 1 maintainer
adios 1.13.1
The Adaptable IO System (ADIOS) provides a simple, flexible way for scientists to describe the da...8 versions - Latest release: about 2 years ago - 4 dependent packages - 1 maintainer
Top 1.8% on spack.io
8 versions - Latest release: about 2 years ago - 17 dependent packages - 3 maintainers
adios2 2.8.0
The Adaptable Input Output System version 2, developed in the Exascale Computing Program8 versions - Latest release: about 2 years ago - 17 dependent packages - 3 maintainers
alps 2.3.0 removed
Algorithms for Physics Simulations Tags: Condensed Matter Physics, Computational Physics1 version - Latest release: about 2 years ago
alquimia 1.0.9
Alquimia is an interface that exposes the capabilities of mature geochemistry codes such as Crunc...6 versions - Latest release: about 2 years ago - 1 dependent package - 15 stars on GitHub - 2 maintainers
amp develop
The Advanced Multi-Physics (AMP) package. The Advanced Multi-Physics (AMP) package is an open sou...1 version - Latest release: about 2 years ago
Top 9.5% on spack.io
34 versions - Latest release: about 2 years ago - 2 dependent packages - 3 maintainers
amrex 18.10.1
AMReX is a publicly available software framework designed for building massively parallel block- ...34 versions - Latest release: about 2 years ago - 2 dependent packages - 3 maintainers
aspa master
A fundamental premise in ExMatEx is that scale-bridging performed in heterogeneous MPMD materials...1 version - Latest release: about 2 years ago
Top 9.9% on spack.io
1 version - Latest release: about 2 years ago - 2 dependent packages
blasr 5.3.1 removed
The PacBio long read aligner.1 version - Latest release: about 2 years ago - 2 dependent packages
blasr-libcpp 5.3.1 removed
Blasr_libcpp is a library used by blasr and other executables such as samtoh5, loadPulses for ana...1 version - Latest release: about 2 years ago - 1 dependent package - 1 maintainer
caffe rc2
Caffe is a deep learning framework made with expression, speed, and modularity in mind. It is dev...5 versions - Latest release: about 2 years ago
camellia master
Camellia: user-friendly MPI-parallel adaptive finite element package, with support for DPG and ot...1 version - Latest release: about 2 years ago - 1 maintainer
Top 4.2% on spack.io
12 versions - Latest release: about 2 years ago - 6 dependent packages - 1 maintainer
cgns 4.3.0
The CFD General Notation System (CGNS) provides a general, portable, and extensible standard for ...12 versions - Latest release: about 2 years ago - 6 dependent packages - 1 maintainer
channelflow master
Channelflow is a software system for numerical analysis of the incompressible fluid flow in chann...1 version - Latest release: about 2 years ago - 48 stars on GitHub
chombo develop
The Chombo package provides a set of tools for implementing finite difference and finite-volume m...2 versions - Latest release: about 2 years ago - 1 dependent package
citcoms 3.3.1
CitcomS is a finite element code designed to solve compressible thermochemical convection problem...3 versions - Latest release: about 2 years ago - 1 maintainer
cleverleaf develop
CleverLeaf is a hydrodynamics mini-app that extends CloverLeaf with Adaptive Mesh Refinement usin...1 version - Latest release: about 2 years ago
compose 2.17
CompOSE: CompStar Online Supernovae Equations of State The online service CompOSE provides data t...1 version - Latest release: about 2 years ago - 1 maintainer
Top 4.2% on spack.io
16 versions - Latest release: about 2 years ago - 6 dependent packages - 1 maintainer
conduit 0.8.2
Conduit is an open source project from Lawrence Livermore National Laboratory that provides an in...16 versions - Latest release: about 2 years ago - 6 dependent packages - 1 maintainer
dalton 2018.2
Molecular electronic-structure program with extensive functionality for calculations of molecular...3 versions - Latest release: about 2 years ago - 1 maintainer
damaris 1.6.0
Damaris is a middleware for I/O and in situ analytics targeting large- scale, MPI-based HPC simul...6 versions - Latest release: about 2 years ago - 1 maintainer
darshan-runtime 3.3.1
Darshan (runtime) is a scalable HPC I/O characterization tool designed to capture an accurate pic...12 versions - Latest release: about 2 years ago - 1 dependent package - 2 maintainers
Top 7.1% on spack.io
18 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
dealii 9.3.3
C++ software library providing well-documented tools to build finite element codes for a broad va...18 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
ecp-data-vis-sdk 1.0
ECP Data & Vis SDK1 version - Latest release: about 2 years ago - 0 stars on GitHub - 2 maintainers
enzo 2.6.1
The Enzo adaptive mesh-refinement simulation code.3 versions - Latest release: about 2 years ago
etsf-io 1.0.4
ETSF_IO is a library implementing the Nanoquanta/ETSF file format specifications. ETSF_IO enables...1 version - Latest release: about 2 years ago - 0 stars on GitHub
faodel 1.2108.1
Flexible, Asynchronous, Object Data-Exchange Libraries7 versions - Latest release: about 2 years ago - 2 dependent packages - 3 stars on GitHub - 2 maintainers
fenics 2016.2.0
FEniCS is organized as a collection of interoperable components that together form the FEniCS Pro...4 versions - Latest release: about 2 years ago - 3 maintainers
fenics-dolfinx 0.3.0 💰
Next generation FEniCS problem solving environment4 versions - Latest release: about 2 years ago - 1 dependent package - 436 stars on GitHub - 4 maintainers
ferret 7.6.0
Ferret is an interactive computer visualization and analysis environment designed to meet the nee...6 versions - Latest release: about 2 years ago - 1 maintainer
Top 7.1% on spack.io
5 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
flecsi 2.1.0
FleCSI is a compile-time configurable framework designed to support multi-physics application dev...5 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
flecsph master
FleCSPH is a multi-physics compact application that exercises FleCSI parallel data structures for...1 version - Latest release: about 2 years ago - 1 maintainer
fleur 3.1
FLEUR (Full-potential Linearised augmented plane wave in EURope) is a code family for calculating...5 versions - Latest release: about 2 years ago
flexi 21.03.0
Open Source High-Order Unstructured Discontinuous Galerkin Fluid Dynamics Solver2 versions - Latest release: about 2 years ago
ftk 0.0.5
FTK is a library that simplifies, scales, and delivers feature tracking algorithms for scientific...4 versions - Latest release: about 2 years ago - 18 stars on GitHub - 1 maintainer
gdl 0.9.9
A free and open-source IDL/PV-WAVE compiler. GNU Data Language (GDL) is a free/libre/open source ...2 versions - Latest release: about 2 years ago - 235 stars on GitHub
Top 9.5% on spack.io
15 versions - Latest release: about 2 years ago - 3 dependent packages
gmsh 4.8.4
Gmsh is a free 3D finite element grid generator with a built-in CAD engine and post-processor. It...15 versions - Latest release: about 2 years ago - 3 dependent packages
grackle 2.0.1
Grackle is a chemistry and radiative cooling library for astrophysical simulations with interface...4 versions - Latest release: about 2 years ago
h5bench 1.0
A benchmark suite for measuring HDF5 performance.4 versions - Latest release: about 2 years ago - 23 stars on GitHub - 2 maintainers
h5cpp 1.10.4-6
Easy to use HDF5 C++ templates for Serial and Parallel HDF53 versions - Latest release: about 2 years ago - 1 maintainer
h5hut 2.0.0rc3
H5hut (HDF5 Utility Toolkit). High-Performance I/O Library for Particle- based Simulations.1 version - Latest release: about 2 years ago
h5part 1.6.6
Portable High Performance Parallel Data Interface to HDF51 version - Latest release: about 2 years ago - 1 dependent package
h5z-zfp 1.0.1
A highly flexible floating point and integer compression plugin for the HDF5 library using ZFP co...4 versions - Latest release: about 2 years ago - 1 dependent package - 3 maintainers
hal 2.1
HAL is a structure to efficiently store and index multiple genome alignments and ancestral recons...1 version - Latest release: about 2 years ago - 115 stars on GitHub - 1 maintainer
hdf-eos5 5.1.16
HDF-EOS (Hierarchical Data Format - Earth Observing System) is a self- describing file format bas...2 versions - Latest release: about 2 years ago - 1 maintainer
hdf5-blosc master
Blosc filter for HDF51 version - Latest release: about 2 years ago - 38 stars on GitHub
hdf5-vfd-gds 1.0.1
This package enables GPU Direct Storage Virtual File Driver in HDF5.3 versions - Latest release: about 2 years ago - 6 stars on GitHub - 2 maintainers
hdf5-vol-async v1.0
This package enables asynchronous IO in HDF5. Usage: Set the HDF5_VOL_CONNECTOR environment varia...1 version - Latest release: about 2 years ago - 3 maintainers
hdf5-vol-external-passthrough 1.0
Package for HDF5 external pass-through VOL.2 versions - Latest release: about 2 years ago - 1 maintainer
hdf5-vol-log 1.1.0
Log-based VOL - an HDF5 VOL Plugin that stores HDF5 datasets in a log- based storage layout.2 versions - Latest release: about 2 years ago - 2 stars on GitHub - 2 maintainers
ior 3.3.0
The IOR software is used for benchmarking parallel file systems using POSIX, MPI-IO, or HDF5 inte...6 versions - Latest release: about 2 years ago - 286 stars on GitHub
julea master
JULEA is a flexible storage framework that allows offering arbitrary I/O interfaces to applicatio...1 version - Latest release: about 2 years ago - 1 maintainer
kallisto 0.48.0
kallisto is a program for quantifying abundances of transcripts from RNA-Seq data.3 versions - Latest release: about 2 years ago - 1 dependent package
kealib 1.4.12
An HDF5 Based Raster File Format. KEALib provides an implementation of the GDAL data model. The f...7 versions - Latest release: about 2 years ago - 1 dependent package - 3 maintainers
Top 9.5% on spack.io
46 versions - Latest release: about 2 years ago - 2 dependent packages - 1 maintainer
lammps 20170901
LAMMPS stands for Large-scale Atomic/Molecular Massively Parallel Simulator.46 versions - Latest release: about 2 years ago - 2 dependent packages - 1 maintainer
legion cr
Legion is a data-centric parallel programming system for writing portable high performance progra...4 versions - Latest release: about 2 years ago - 1 dependent package - 3 maintainers
libhio 1.4.1.0
libHIO is a flexible, high-performance parallel IO package developed at LANL. libHIO supports IO ...8 versions - Latest release: about 2 years ago - 22 stars on GitHub - 1 maintainer
libmesh 1.4.1
The libMesh library provides a framework for the numerical simulation of partial differential equ...7 versions - Latest release: about 2 years ago - 1 dependent package
librom develop
libROM: library for computing large-scale reduced order models1 version - Latest release: about 2 years ago - 130 stars on GitHub
libsplash 1.7.0
libSplash aims at developing a HDF5-based I/O library for HPC simulations. It is created as an ea...8 versions - Latest release: about 2 years ago - 15 stars on GitHub - 1 maintainer
lulesh 2.0.3
LULESH is a highly simplified application, hard-coded to only style typical in scientific C or C+...1 version - Latest release: about 2 years ago
macsio 1.0
A Multi-purpose, Application-Centric, Scalable I/O Proxy Application.3 versions - Latest release: about 2 years ago - 1 dependent package - 31 stars on GitHub
meep 1.21.0
Meep (or MEEP) is a free finite-difference time-domain (FDTD) simulation software package develop...5 versions - Latest release: about 2 years ago - 1 dependent package
memsurfer develop
MemSurfer is a tool to compute and analyze membrane surfaces found in a wide variety of large-sca...3 versions - Latest release: about 2 years ago - 19 stars on GitHub - 1 maintainer
Top 5.8% on spack.io
13 versions - Latest release: about 2 years ago - 4 dependent packages - 2 maintainers
moab 5.3.0
MOAB is a component for representing and evaluating mesh data. MOAB can store structured and unst...13 versions - Latest release: about 2 years ago - 4 dependent packages - 2 maintainers
Top 7.0% on spack.io
12 versions - Latest release: about 2 years ago - 3 dependent packages - 1 maintainer
mofem-cephas 0.8.17 removed
MoFEM is finite element core library12 versions - Latest release: about 2 years ago - 3 dependent packages - 1 maintainer
molcas 8.2
Molcas is an ab initio quantum chemistry software package developed by scientists to be used by s...1 version - Latest release: about 2 years ago
ncl 6.6.2
NCL is an interpreted language designed specifically for scientific data analysis and visualizati...3 versions - Latest release: about 2 years ago - 1 maintainer
Top 0.4% on spack.io
18 versions - Latest release: about 2 years ago - 74 dependent packages - 2 maintainers
netcdf-c 4.8.1
NetCDF (network Common Data Form) is a set of software libraries and machine-independent data for...18 versions - Latest release: about 2 years ago - 74 dependent packages - 2 maintainers
op2-dsl 1.1.0
OP2 is a high-level embedded domain specific language for writing unstructured mesh algorithms wi...2 versions - Latest release: about 2 years ago - 3 maintainers
Top 1.7% on spack.io
20 versions - Latest release: about 2 years ago - 23 dependent packages - 2 maintainers
opencv 4.5.4
OpenCV (Open Source Computer Vision Library) is an open source computer vision and machine learni...20 versions - Latest release: about 2 years ago - 23 dependent packages - 2 maintainers
Top 7.1% on spack.io
10 versions - Latest release: about 2 years ago - 3 dependent packages - 1 maintainer
openfast 2.6.0
Wind turbine simulation package from NREL10 versions - Latest release: about 2 years ago - 3 dependent packages - 1 maintainer
openmc 0.13.0
OpenMC is a community-developed Monte Carlo neutron and photon transport simulation code. It is c...8 versions - Latest release: about 2 years ago - 1 dependent package - 1 maintainer
Top 7.1% on spack.io
13 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
openpmd-api 0.14.4
C++ & Python API for Scientific I/O13 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
pacbio-dextractor 2016-08-09
The Dextractor and Compression Command Library. This is a special fork required by some pacbio ut...1 version - Latest release: about 2 years ago - 1 dependent package - 1 stars on GitHub
Top 3.1% on spack.io
20 versions - Latest release: about 2 years ago - 9 dependent packages - 3 maintainers
paraview 5.10.1
ParaView is an open-source, multi-platform data analysis and visualization application. This pack...20 versions - Latest release: about 2 years ago - 9 dependent packages - 3 maintainers
parflow 3.9.0
ParFlow is an open-source parallel watershed simulator which includes overland flow, complex topo...3 versions - Latest release: about 2 years ago - 1 maintainer
Top 1.1% on spack.io
67 versions - Latest release: about 2 years ago - 31 dependent packages - 3 maintainers
petsc 3.17.0
PETSc is a suite of data structures and routines for the scalable (parallel) solution of scientif...67 versions - Latest release: about 2 years ago - 31 dependent packages - 3 maintainers
Top 9.5% on spack.io
6 versions - Latest release: about 2 years ago - 2 dependent packages - 2 maintainers
pflotran 3.0.2
PFLOTRAN is an open source, state-of-the-art massively parallel subsurface flow and reactive tran...6 versions - Latest release: about 2 years ago - 2 dependent packages - 2 maintainers
py-espresso 4.0.2
ESPResSo is a highly versatile software package for performing and analyzing scientific Molecular...4 versions - Latest release: about 2 years ago - 1 dependent package
py-fenics-dolfinx 0.3.0 💰
Python interface to the next generation FEniCS problem solving environment4 versions - Latest release: about 2 years ago - 436 stars on GitHub - 4 maintainers
Top 0.5% on spack.io
17 versions - Latest release: about 2 years ago - 69 dependent packages - 3 maintainers
py-h5py 3.6.0
The h5py package provides both a high- and low-level interface to the HDF5 library from Python.17 versions - Latest release: about 2 years ago - 69 dependent packages - 3 maintainers
py-pynio 1.5.4
PyNIO ("pie-nee-oh") is a Python module that allows read and/or write access to a variety of scie...1 version - Latest release: about 2 years ago - 1 maintainer
py-sfepy 2017.3
SfePy (https://sfepy.org/) is a software for solving systems of coupled partial differential equa...2 versions - Latest release: about 2 years ago - 1 maintainer
q-e-sirius 6.7-rc1-sirius
SIRIUS enabled fork of QuantumESPRESSO.2 versions - Latest release: about 2 years ago - 6 stars on GitHub - 1 maintainer
qmcpack 3.13.0
QMCPACK, is a modern high-performance open-source Quantum Monte Carlo (QMC) simulation code.17 versions - Latest release: about 2 years ago - 1 maintainer
quantum-espresso 6.4.1
Quantum ESPRESSO is an integrated suite of Open-Source computer codes for electronic-structure ca...15 versions - Latest release: about 2 years ago - 3 maintainers
quinoa develop removed
Quinoa is a set of computational tools that enables research and numerical analysis in fluid dyna...1 version - Latest release: about 2 years ago
raft 1.2.3
RAFT: Reconstruct Algorithms for Tomography. Toolbox under development at Brazilian Synchrotron L...2 versions - Latest release: about 2 years ago
recorder 2.2.1
A multi-level library for understanding I/O activity in HPC applications.7 versions - Latest release: about 2 years ago - 33 stars on GitHub - 1 maintainer
regcm 4.7.0
RegCM, ICTP Regional Climate Model (https://ictp.it).1 version - Latest release: about 2 years ago
reprimand 1.3
RePrimAnd: Recovery of Primitives And EOS framework RePrimAnd is a support library for numerical ...2 versions - Latest release: about 2 years ago - 1 maintainer
rmgdft 4.2.2
RMGDFT is a high performance real-space density functional code designed for large scale electron...3 versions - Latest release: about 2 years ago - 1 maintainer
rockstar yt
The Rockstar Halo Finder2 versions - Latest release: about 2 years ago - 1 dependent package
saga-gis 7.4.0
SAGA is a GIS for Automated Geoscientific Analyses and has been designed for an easy and effecti...19 versions - Latest release: about 2 years ago
salome-med 4.1.0
salome-med is the MED file format that is the SALOME platform standard file for meshes and fields...4 versions - Latest release: about 2 years ago - 2 dependent packages - 1 maintainer
samrai 3.12.0
SAMRAI (Structured Adaptive Mesh Refinement Application Infrastructure) is an object-oriented C++...17 versions - Latest release: about 2 years ago - 1 dependent package
scorpio 2021-12-10
SCORPIO Scalable Parallel I/O module for Environmental Management Applications This library provi...2 versions - Latest release: about 2 years ago - 0 stars on GitLab.com - 2 maintainers
Top 9.5% on spack.io
16 versions - Latest release: about 2 years ago - 2 dependent packages - 1 maintainer
seacas 2019-07-26
The SEACAS Project contains the Exodus and IOSS I/O libraries and a collection of applications wh...16 versions - Latest release: about 2 years ago - 2 dependent packages - 1 maintainer