Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
Top 0.2% on spack.io
Top 0.4% dependent packages on spack.io
Top 0.4% dependent packages on spack.io
spack.io : hdf5
HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and complex data.
Registry
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Source
- JSON
purl: pkg:spack/hdf5
License: Other
Latest release: about 2 years ago
First release: about 2 years ago
Dependent packages: 161
Last synced: 9 days ago
abinit 9.10.5
ABINIT is a package whose main program allows one to find the total energy, charge density and el...12 versions - Latest release: 2 months ago - 1 maintainer
Top 5.8% on spack.io
8 versions - Latest release: about 2 years ago - 4 dependent packages - 1 maintainer
adios 1.13.1
The Adaptable IO System (ADIOS) provides a simple, flexible way for scientists to describe the da...8 versions - Latest release: about 2 years ago - 4 dependent packages - 1 maintainer
Top 1.8% on spack.io
8 versions - Latest release: about 2 years ago - 17 dependent packages - 3 maintainers
adios2 2.8.0
The Adaptable Input Output System version 2, developed in the Exascale Computing Program8 versions - Latest release: about 2 years ago - 17 dependent packages - 3 maintainers
alembic 1.8.6
Alembic is an open computer graphics interchange framework. Alembic distills complex, animated sc...3 versions - Latest release: about 1 month ago
alps 2.3.0 removed
Algorithms for Physics Simulations Tags: Condensed Matter Physics, Computational Physics1 version - Latest release: about 2 years ago
alquimia 1.0.9
Alquimia is an interface that exposes the capabilities of mature geochemistry codes such as Crunc...6 versions - Latest release: about 2 years ago - 1 dependent package - 15 stars on GitHub - 2 maintainers
amp develop
The Advanced Multi-Physics (AMP) package. The Advanced Multi-Physics (AMP) package is an open sou...1 version - Latest release: about 2 years ago
Top 9.5% on spack.io
34 versions - Latest release: about 2 years ago - 2 dependent packages - 3 maintainers
amrex 18.10.1
AMReX is a publicly available software framework designed for building massively parallel block- ...34 versions - Latest release: about 2 years ago - 2 dependent packages - 3 maintainers
Top 5.8% on spack.io
9 versions - Latest release: 6 days ago - 6 dependent packages
armadillo 12.8.2
Armadillo is a high quality linear algebra library (matrix maths) for the C++ language, aiming to...9 versions - Latest release: 6 days ago - 6 dependent packages
aspa master
A fundamental premise in ExMatEx is that scale-bridging performed in heterogeneous MPMD materials...1 version - Latest release: about 2 years ago
berkeleygw 3.1.0
BerkeleyGW is a many-body perturbation theory code for excited states, using the GW method and th...5 versions - Latest release: 4 months ago - 1 maintainer
Top 9.9% on spack.io
1 version - Latest release: about 2 years ago - 2 dependent packages
blasr 5.3.1 removed
The PacBio long read aligner.1 version - Latest release: about 2 years ago - 2 dependent packages
blasr-libcpp 5.3.1 removed
Blasr_libcpp is a library used by blasr and other executables such as samtoh5, loadPulses for ana...1 version - Latest release: about 2 years ago - 1 dependent package - 1 maintainer
caffe rc2
Caffe is a deep learning framework made with expression, speed, and modularity in mind. It is dev...5 versions - Latest release: about 2 years ago
camellia master
Camellia: user-friendly MPI-parallel adaptive finite element package, with support for DPG and ot...1 version - Latest release: about 2 years ago - 1 maintainer
casacore 3.5.0
A suite of c++ libraries for radio astronomy data processing.9 versions - Latest release: 11 months ago - 3 dependent packages - 99 stars on GitHub - 1 maintainer
cdo 2.4.0
CDO is a collection of command line Operators to manipulate and analyse Climate and NWP model Data.26 versions - Latest release: about 1 month ago - 1 dependent package - 2 maintainers
Top 4.2% on spack.io
12 versions - Latest release: about 2 years ago - 6 dependent packages - 1 maintainer
cgns 4.3.0
The CFD General Notation System (CGNS) provides a general, portable, and extensible standard for ...12 versions - Latest release: about 2 years ago - 6 dependent packages - 1 maintainer
channelflow master
Channelflow is a software system for numerical analysis of the incompressible fluid flow in chann...1 version - Latest release: about 2 years ago - 48 stars on GitHub
chombo develop
The Chombo package provides a set of tools for implementing finite difference and finite-volume m...2 versions - Latest release: about 2 years ago - 1 dependent package
citcoms 3.3.1
CitcomS is a finite element code designed to solve compressible thermochemical convection problem...3 versions - Latest release: about 2 years ago - 1 maintainer
cleverleaf develop
CleverLeaf is a hydrodynamics mini-app that extends CloverLeaf with Adaptive Mesh Refinement usin...1 version - Latest release: about 2 years ago
cmor 3.7.2
Climate Model Output Rewriter is used to produce CF-compliant netCDF files. The structure of the ...8 versions - Latest release: about 1 year ago
compose 2.17
CompOSE: CompStar Online Supernovae Equations of State The online service CompOSE provides data t...1 version - Latest release: about 2 years ago - 1 maintainer
Top 4.2% on spack.io
16 versions - Latest release: about 2 years ago - 6 dependent packages - 1 maintainer
conduit 0.8.2
Conduit is an open source project from Lawrence Livermore National Laboratory that provides an in...16 versions - Latest release: about 2 years ago - 6 dependent packages - 1 maintainer
dalton 2018.2
Molecular electronic-structure program with extensive functionality for calculations of molecular...3 versions - Latest release: about 2 years ago - 1 maintainer
damaris 1.6.0
Damaris is a middleware for I/O and in situ analytics targeting large- scale, MPI-based HPC simul...6 versions - Latest release: about 2 years ago - 1 maintainer
damask-grid 3.0.0-beta
Grid solver for DAMASK6 versions - Latest release: 3 months ago - 1 dependent package - 1 maintainer
damask-mesh 3.0.0-beta
Mesh solver for DAMASK6 versions - Latest release: 3 months ago - 1 dependent package - 1 maintainer
darshan-runtime 3.3.1
Darshan (runtime) is a scalable HPC I/O characterization tool designed to capture an accurate pic...12 versions - Latest release: about 2 years ago - 1 dependent package - 2 maintainers
Top 7.1% on spack.io
18 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
dealii 9.3.3
C++ software library providing well-documented tools to build finite element codes for a broad va...18 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
ecp-data-vis-sdk 1.0
ECP Data & Vis SDK1 version - Latest release: about 2 years ago - 0 stars on GitHub - 2 maintainers
enzo 2.6.1
The Enzo adaptive mesh-refinement simulation code.3 versions - Latest release: about 2 years ago
etsf-io 1.0.4
ETSF_IO is a library implementing the Nanoquanta/ETSF file format specifications. ETSF_IO enables...1 version - Latest release: about 2 years ago - 0 stars on GitHub
faodel 1.2108.1
Flexible, Asynchronous, Object Data-Exchange Libraries7 versions - Latest release: about 2 years ago - 2 dependent packages - 3 stars on GitHub - 2 maintainers
fenics 2016.2.0
FEniCS is organized as a collection of interoperable components that together form the FEniCS Pro...4 versions - Latest release: about 2 years ago - 3 maintainers
fenics-dolfinx 0.3.0 💰
Next generation FEniCS problem solving environment4 versions - Latest release: about 2 years ago - 1 dependent package - 436 stars on GitHub - 4 maintainers
ferret 7.6.0
Ferret is an interactive computer visualization and analysis environment designed to meet the nee...6 versions - Latest release: about 2 years ago - 1 maintainer
Top 7.1% on spack.io
6 versions - Latest release: 10 months ago - 3 dependent packages
flann 1.9.2
FLANN is a library for performing fast approximate nearest neighbor searches in high dimensional ...6 versions - Latest release: 10 months ago - 3 dependent packages
Top 7.1% on spack.io
5 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
flecsi 2.1.0
FleCSI is a compile-time configurable framework designed to support multi-physics application dev...5 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
flecsph master
FleCSPH is a multi-physics compact application that exercises FleCSI parallel data structures for...1 version - Latest release: about 2 years ago - 1 maintainer
fleur 3.1
FLEUR (Full-potential Linearised augmented plane wave in EURope) is a code family for calculating...5 versions - Latest release: about 2 years ago
flexi 21.03.0
Open Source High-Order Unstructured Discontinuous Galerkin Fluid Dynamics Solver2 versions - Latest release: about 2 years ago
ftk 0.0.5
FTK is a library that simplifies, scales, and delivers feature tracking algorithms for scientific...4 versions - Latest release: about 2 years ago - 18 stars on GitHub - 1 maintainer
Top 1.1% on spack.io
65 versions - Latest release: about 1 month ago - 30 dependent packages - 1 maintainer
gdal 3.8.5
GDAL: Geospatial Data Abstraction Library. GDAL is a translator library for raster and vector geo...65 versions - Latest release: about 1 month ago - 30 dependent packages - 1 maintainer
gdl 0.9.9
A free and open-source IDL/PV-WAVE compiler. GNU Data Language (GDL) is a free/libre/open source ...2 versions - Latest release: about 2 years ago - 235 stars on GitHub
Top 9.5% on spack.io
15 versions - Latest release: about 2 years ago - 3 dependent packages
gmsh 4.8.4
Gmsh is a free 3D finite element grid generator with a built-in CAD engine and post-processor. It...15 versions - Latest release: about 2 years ago - 3 dependent packages
grackle 2.0.1
Grackle is a chemistry and radiative cooling library for astrophysical simulations with interface...4 versions - Latest release: about 2 years ago
grads 2.2.3
The Grid Analysis and Display System (GrADS) is an interactive desktop tool that is used for easy...3 versions - Latest release: 8 months ago - 1 maintainer
h5bench 1.0
A benchmark suite for measuring HDF5 performance.4 versions - Latest release: about 2 years ago - 23 stars on GitHub - 2 maintainers
h5cpp 1.10.4-6
Easy to use HDF5 C++ templates for Serial and Parallel HDF53 versions - Latest release: about 2 years ago - 1 maintainer
h5hut 2.0.0rc3
H5hut (HDF5 Utility Toolkit). High-Performance I/O Library for Particle- based Simulations.1 version - Latest release: about 2 years ago
h5part 1.6.6
Portable High Performance Parallel Data Interface to HDF51 version - Latest release: about 2 years ago - 1 dependent package
h5utils 1.13.2
h5utils is a set of utilities for visualization and conversion of scientific data in the free, po...3 versions - Latest release: about 1 month ago
h5z-zfp 1.0.1
A highly flexible floating point and integer compression plugin for the HDF5 library using ZFP co...4 versions - Latest release: about 2 years ago - 1 dependent package - 3 maintainers
hal 2.1
HAL is a structure to efficiently store and index multiple genome alignments and ancestral recons...1 version - Latest release: about 2 years ago - 115 stars on GitHub - 1 maintainer
hdf-eos5 5.1.16
HDF-EOS (Hierarchical Data Format - Earth Observing System) is a self- describing file format bas...2 versions - Latest release: about 2 years ago - 1 maintainer
hdf5-blosc master
Blosc filter for HDF51 version - Latest release: about 2 years ago - 38 stars on GitHub
hdf5-vfd-gds 1.0.1
This package enables GPU Direct Storage Virtual File Driver in HDF5.3 versions - Latest release: about 2 years ago - 6 stars on GitHub - 2 maintainers
hdf5-vol-async v1.0
This package enables asynchronous IO in HDF5. Usage: Set the HDF5_VOL_CONNECTOR environment varia...1 version - Latest release: about 2 years ago - 3 maintainers
hdf5-vol-external-passthrough 1.0
Package for HDF5 external pass-through VOL.2 versions - Latest release: about 2 years ago - 1 maintainer
hdf5-vol-log 1.1.0
Log-based VOL - an HDF5 VOL Plugin that stores HDF5 datasets in a log- based storage layout.2 versions - Latest release: about 2 years ago - 2 stars on GitHub - 2 maintainers
hdfview 3.3.0
HDFView is a visual tool written in Java for browsing and editing HDF (HDF5 and HDF4) files.5 versions - Latest release: 12 months ago
highfive 2.6.2
HighFive - Header only C++ HDF5 interface17 versions - Latest release: over 1 year ago - 1 dependent package - 513 stars on GitHub - 1 maintainer
ior 3.3.0
The IOR software is used for benchmarking parallel file systems using POSIX, MPI-IO, or HDF5 inte...6 versions - Latest release: about 2 years ago - 286 stars on GitHub
itensor 3.2.0
ITensor -Intelligent Tensor- is a library for implementing tensor network calculations.16 versions - Latest release: 6 days ago
Top 9.5% on spack.io
6 versions - Latest release: over 1 year ago - 3 dependent packages - 1 maintainer
itk 5.3.0
The Insight Toolkit (ITK) is an open-source, cross-platform toolkit for N-dimensional scientific ...6 versions - Latest release: over 1 year ago - 3 dependent packages - 1 maintainer
julea master
JULEA is a flexible storage framework that allows offering arbitrary I/O interfaces to applicatio...1 version - Latest release: about 2 years ago - 1 maintainer
kallisto 0.48.0
kallisto is a program for quantifying abundances of transcripts from RNA-Seq data.3 versions - Latest release: about 2 years ago - 1 dependent package
kealib 1.4.12
An HDF5 Based Raster File Format. KEALib provides an implementation of the GDAL data model. The f...7 versions - Latest release: about 2 years ago - 1 dependent package - 3 maintainers
Top 9.5% on spack.io
46 versions - Latest release: about 2 years ago - 2 dependent packages - 1 maintainer
lammps 20170901
LAMMPS stands for Large-scale Atomic/Molecular Massively Parallel Simulator.46 versions - Latest release: about 2 years ago - 2 dependent packages - 1 maintainer
legion cr
Legion is a data-centric parallel programming system for writing portable high performance progra...4 versions - Latest release: about 2 years ago - 1 dependent package - 3 maintainers
libhio 1.4.1.0
libHIO is a flexible, high-performance parallel IO package developed at LANL. libHIO supports IO ...8 versions - Latest release: about 2 years ago - 22 stars on GitHub - 1 maintainer
libmesh 1.4.1
The libMesh library provides a framework for the numerical simulation of partial differential equ...7 versions - Latest release: about 2 years ago - 1 dependent package
librom develop
libROM: library for computing large-scale reduced order models1 version - Latest release: about 2 years ago - 130 stars on GitHub
libsplash 1.7.0
libSplash aims at developing a HDF5-based I/O library for HPC simulations. It is created as an ea...8 versions - Latest release: about 2 years ago - 15 stars on GitHub - 1 maintainer
lulesh 2.0.3
LULESH is a highly simplified application, hard-coded to only style typical in scientific C or C+...1 version - Latest release: about 2 years ago
macsio 1.0
A Multi-purpose, Application-Centric, Scalable I/O Proxy Application.3 versions - Latest release: about 2 years ago - 1 dependent package - 31 stars on GitHub
Top 9.5% on spack.io
17 versions - Latest release: about 2 months ago - 2 dependent packages
matio 1.5.26
matio is an C library for reading and writing Matlab MAT files17 versions - Latest release: about 2 months ago - 2 dependent packages
Top 9.5% on spack.io
5 versions - Latest release: about 2 months ago - 2 dependent packages - 1 maintainer
med 5.0.0
The MED file format is a specialization of the HDF5 standard.5 versions - Latest release: about 2 months ago - 2 dependent packages - 1 maintainer
meep 1.21.0
Meep (or MEEP) is a free finite-difference time-domain (FDTD) simulation software package develop...5 versions - Latest release: about 2 years ago - 1 dependent package
memsurfer develop
MemSurfer is a tool to compute and analyze membrane surfaces found in a wide variety of large-sca...3 versions - Latest release: about 2 years ago - 19 stars on GitHub - 1 maintainer
Top 5.8% on spack.io
13 versions - Latest release: about 2 years ago - 4 dependent packages - 2 maintainers
moab 5.3.0
MOAB is a component for representing and evaluating mesh data. MOAB can store structured and unst...13 versions - Latest release: about 2 years ago - 4 dependent packages - 2 maintainers
Top 7.0% on spack.io
12 versions - Latest release: about 2 years ago - 3 dependent packages - 1 maintainer
mofem-cephas 0.8.17 removed
MoFEM is finite element core library12 versions - Latest release: about 2 years ago - 3 dependent packages - 1 maintainer
molcas 8.2
Molcas is an ab initio quantum chemistry software package developed by scientists to be used by s...1 version - Latest release: about 2 years ago
mothur 1.48.0
This project seeks to develop a single piece of open-source, expandable software to fill the bioi...6 versions - Latest release: over 1 year ago - 242 stars on GitHub - 1 maintainer
ncl 6.6.2
NCL is an interpreted language designed specifically for scientific data analysis and visualizati...3 versions - Latest release: about 2 years ago - 1 maintainer
Top 0.4% on spack.io
18 versions - Latest release: about 2 years ago - 74 dependent packages - 2 maintainers
netcdf-c 4.8.1
NetCDF (network Common Data Form) is a set of software libraries and machine-independent data for...18 versions - Latest release: about 2 years ago - 74 dependent packages - 2 maintainers
Top 1.9% on spack.io
20 versions - Latest release: about 1 month ago - 15 dependent packages - 1 maintainer
octave 9.1.0
GNU Octave is a high-level language, primarily intended for numerical computations. It provides a...20 versions - Latest release: about 1 month ago - 15 dependent packages - 1 maintainer
op2-dsl 1.1.0
OP2 is a high-level embedded domain specific language for writing unstructured mesh algorithms wi...2 versions - Latest release: about 2 years ago - 3 maintainers
Top 1.7% on spack.io
20 versions - Latest release: about 2 years ago - 23 dependent packages - 2 maintainers
opencv 4.5.4
OpenCV (Open Source Computer Vision Library) is an open source computer vision and machine learni...20 versions - Latest release: about 2 years ago - 23 dependent packages - 2 maintainers
Top 7.1% on spack.io
10 versions - Latest release: about 2 years ago - 3 dependent packages - 1 maintainer
openfast 2.6.0
Wind turbine simulation package from NREL10 versions - Latest release: about 2 years ago - 3 dependent packages - 1 maintainer
openmc 0.13.0
OpenMC is a community-developed Monte Carlo neutron and photon transport simulation code. It is c...8 versions - Latest release: about 2 years ago - 1 dependent package - 1 maintainer
openmolcas 23.06
OpenMolcas is a quantum chemistry software package. The key feature of OpenMolcas is the multicon...3 versions - Latest release: 9 months ago - 75 stars on GitLab.com
Top 7.1% on spack.io
13 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
openpmd-api 0.14.4
C++ & Python API for Scientific I/O13 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
pacbio-dextractor 2016-08-09
The Dextractor and Compression Command Library. This is a special fork required by some pacbio ut...1 version - Latest release: about 2 years ago - 1 dependent package - 1 stars on GitHub
Top 3.1% on spack.io
20 versions - Latest release: about 2 years ago - 9 dependent packages - 3 maintainers
paraview 5.10.1
ParaView is an open-source, multi-platform data analysis and visualization application. This pack...20 versions - Latest release: about 2 years ago - 9 dependent packages - 3 maintainers
parflow 3.9.0
ParFlow is an open-source parallel watershed simulator which includes overland flow, complex topo...3 versions - Latest release: about 2 years ago - 1 maintainer