Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

Top 0.2% on spack.io
Top 0.4% dependent packages on spack.io

spack.io : hdf5

HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and complex data.

Registry - Source - JSON
purl: pkg:spack/hdf5
License: Other
Latest release: about 2 years ago
First release: about 2 years ago
Dependent packages: 161
Last synced: 4 days ago

lulesh 2.0.3
LULESH is a highly simplified application, hard-coded to only style typical in scientific C or C+...
1 version - Latest release: about 2 years ago
libsplash 1.7.0
libSplash aims at developing a HDF5-based I/O library for HPC simulations. It is created as an ea...
8 versions - Latest release: about 2 years ago - 15 stars on GitHub - 1 maintainer
librom develop
libROM: library for computing large-scale reduced order models
1 version - Latest release: about 2 years ago - 130 stars on GitHub
libmesh 1.4.1
The libMesh library provides a framework for the numerical simulation of partial differential equ...
7 versions - Latest release: about 2 years ago - 1 dependent package
libhio 1.4.1.0
libHIO is a flexible, high-performance parallel IO package developed at LANL. libHIO supports IO ...
8 versions - Latest release: about 2 years ago - 22 stars on GitHub - 1 maintainer
legion cr
Legion is a data-centric parallel programming system for writing portable high performance progra...
4 versions - Latest release: about 2 years ago - 1 dependent package - 3 maintainers
Top 9.5% on spack.io
lammps 20170901
LAMMPS stands for Large-scale Atomic/Molecular Massively Parallel Simulator.
46 versions - Latest release: about 2 years ago - 2 dependent packages - 1 maintainer
kealib 1.4.12
An HDF5 Based Raster File Format. KEALib provides an implementation of the GDAL data model. The f...
7 versions - Latest release: about 2 years ago - 1 dependent package - 3 maintainers
kallisto 0.48.0
kallisto is a program for quantifying abundances of transcripts from RNA-Seq data.
4 versions - Latest release: about 2 years ago - 1 dependent package
julea master
JULEA is a flexible storage framework that allows offering arbitrary I/O interfaces to applicatio...
1 version - Latest release: about 2 years ago - 1 maintainer
ior 3.3.0
The IOR software is used for benchmarking parallel file systems using POSIX, MPI-IO, or HDF5 inte...
6 versions - Latest release: about 2 years ago - 286 stars on GitHub
imp 2.8.0
IMP, the Integrative Modeling Platform.
1 version - Latest release: about 2 years ago
hdf5-vol-log 1.1.0
Log-based VOL - an HDF5 VOL Plugin that stores HDF5 datasets in a log- based storage layout.
2 versions - Latest release: about 2 years ago - 2 stars on GitHub - 2 maintainers
hdf5-vol-external-passthrough 1.0
Package for HDF5 external pass-through VOL.
2 versions - Latest release: about 2 years ago - 1 maintainer
hdf5-vol-async v1.0
This package enables asynchronous IO in HDF5. Usage: Set the HDF5_VOL_CONNECTOR environment varia...
1 version - Latest release: about 2 years ago - 3 maintainers
hdf5-vfd-gds 1.0.1
This package enables GPU Direct Storage Virtual File Driver in HDF5.
3 versions - Latest release: about 2 years ago - 6 stars on GitHub - 2 maintainers
hdf5-blosc master
Blosc filter for HDF5
1 version - Latest release: about 2 years ago - 38 stars on GitHub
hdf-eos5 5.1.16
HDF-EOS (Hierarchical Data Format - Earth Observing System) is a self- describing file format bas...
2 versions - Latest release: about 2 years ago - 1 maintainer
hal 2.1
HAL is a structure to efficiently store and index multiple genome alignments and ancestral recons...
1 version - Latest release: about 2 years ago - 115 stars on GitHub - 1 maintainer
h5z-zfp 1.0.1
A highly flexible floating point and integer compression plugin for the HDF5 library using ZFP co...
4 versions - Latest release: about 2 years ago - 1 dependent package - 3 maintainers
h5part 1.6.6
Portable High Performance Parallel Data Interface to HDF5
1 version - Latest release: about 2 years ago - 1 dependent package
h5hut 2.0.0rc3
H5hut (HDF5 Utility Toolkit). High-Performance I/O Library for Particle- based Simulations.
1 version - Latest release: about 2 years ago
h5cpp 1.10.4-6
Easy to use HDF5 C++ templates for Serial and Parallel HDF5
3 versions - Latest release: about 2 years ago - 1 maintainer
h5bench 1.0
A benchmark suite for measuring HDF5 performance.
4 versions - Latest release: about 2 years ago - 23 stars on GitHub - 2 maintainers
grackle 2.0.1
Grackle is a chemistry and radiative cooling library for astrophysical simulations with interface...
4 versions - Latest release: about 2 years ago
Top 9.5% on spack.io
gmsh 4.8.4
Gmsh is a free 3D finite element grid generator with a built-in CAD engine and post-processor. It...
15 versions - Latest release: about 2 years ago - 3 dependent packages - 1 maintainer
gdl 0.9.9
A free and open-source IDL/PV-WAVE compiler. GNU Data Language (GDL) is a free/libre/open source ...
2 versions - Latest release: about 2 years ago - 235 stars on GitHub
ftk 0.0.5
FTK is a library that simplifies, scales, and delivers feature tracking algorithms for scientific...
4 versions - Latest release: about 2 years ago - 18 stars on GitHub - 1 maintainer
flexi 21.03.0
Open Source High-Order Unstructured Discontinuous Galerkin Fluid Dynamics Solver
2 versions - Latest release: about 2 years ago
fleur 3.1
FLEUR (Full-potential Linearised augmented plane wave in EURope) is a code family for calculating...
5 versions - Latest release: about 2 years ago
flecsph master
FleCSPH is a multi-physics compact application that exercises FleCSI parallel data structures for...
1 version - Latest release: about 2 years ago - 1 maintainer
Top 7.1% on spack.io
flecsi 2.1.0
FleCSI is a compile-time configurable framework designed to support multi-physics application dev...
5 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
ferret 7.6.0
Ferret is an interactive computer visualization and analysis environment designed to meet the nee...
6 versions - Latest release: about 2 years ago - 1 maintainer
fenics-dolfinx 0.3.0 💰
Next generation FEniCS problem solving environment
4 versions - Latest release: about 2 years ago - 1 dependent package - 436 stars on GitHub - 4 maintainers
fenics 2016.2.0
FEniCS is organized as a collection of interoperable components that together form the FEniCS Pro...
4 versions - Latest release: about 2 years ago - 3 maintainers
faodel 1.2108.1
Flexible, Asynchronous, Object Data-Exchange Libraries
7 versions - Latest release: about 2 years ago - 2 dependent packages - 3 stars on GitHub - 2 maintainers
etsf-io 1.0.4
ETSF_IO is a library implementing the Nanoquanta/ETSF file format specifications. ETSF_IO enables...
1 version - Latest release: about 2 years ago - 0 stars on GitHub
enzo 2.6.1
The Enzo adaptive mesh-refinement simulation code.
3 versions - Latest release: about 2 years ago
ecp-data-vis-sdk 1.0
ECP Data & Vis SDK
1 version - Latest release: about 2 years ago - 0 stars on GitHub - 2 maintainers
Top 7.1% on spack.io
dealii 9.3.3
C++ software library providing well-documented tools to build finite element codes for a broad va...
18 versions - Latest release: about 2 years ago - 3 dependent packages - 2 maintainers
darshan-runtime 3.3.1
Darshan (runtime) is a scalable HPC I/O characterization tool designed to capture an accurate pic...
12 versions - Latest release: about 2 years ago - 1 dependent package - 2 maintainers
damaris 1.6.0
Damaris is a middleware for I/O and in situ analytics targeting large- scale, MPI-based HPC simul...
6 versions - Latest release: about 2 years ago - 1 maintainer
dalton 2018.2
Molecular electronic-structure program with extensive functionality for calculations of molecular...
3 versions - Latest release: about 2 years ago - 1 maintainer
Top 4.2% on spack.io
conduit 0.8.2
Conduit is an open source project from Lawrence Livermore National Laboratory that provides an in...
16 versions - Latest release: about 2 years ago - 6 dependent packages - 1 maintainer
compose 2.17
CompOSE: CompStar Online Supernovae Equations of State The online service CompOSE provides data t...
1 version - Latest release: about 2 years ago - 1 maintainer
cleverleaf develop
CleverLeaf is a hydrodynamics mini-app that extends CloverLeaf with Adaptive Mesh Refinement usin...
1 version - Latest release: about 2 years ago
citcoms 3.3.1
CitcomS is a finite element code designed to solve compressible thermochemical convection problem...
3 versions - Latest release: about 2 years ago - 1 maintainer
chombo develop
The Chombo package provides a set of tools for implementing finite difference and finite-volume m...
2 versions - Latest release: about 2 years ago - 1 dependent package
channelflow master
Channelflow is a software system for numerical analysis of the incompressible fluid flow in chann...
1 version - Latest release: about 2 years ago - 48 stars on GitHub
Top 4.2% on spack.io
cgns 4.3.0
The CFD General Notation System (CGNS) provides a general, portable, and extensible standard for ...
12 versions - Latest release: about 2 years ago - 6 dependent packages - 1 maintainer
camellia master
Camellia: user-friendly MPI-parallel adaptive finite element package, with support for DPG and ot...
1 version - Latest release: about 2 years ago - 1 maintainer
caffe rc2
Caffe is a deep learning framework made with expression, speed, and modularity in mind. It is dev...
5 versions - Latest release: about 2 years ago
blasr-libcpp 5.3.1 removed
Blasr_libcpp is a library used by blasr and other executables such as samtoh5, loadPulses for ana...
1 version - Latest release: about 2 years ago - 1 dependent package - 1 maintainer
Top 9.9% on spack.io
blasr 5.3.1 removed
The PacBio long read aligner.
1 version - Latest release: about 2 years ago - 2 dependent packages
aspa master
A fundamental premise in ExMatEx is that scale-bridging performed in heterogeneous MPMD materials...
1 version - Latest release: about 2 years ago
Top 9.5% on spack.io
amrex 18.10.1
AMReX is a publicly available software framework designed for building massively parallel block- ...
34 versions - Latest release: about 2 years ago - 2 dependent packages - 3 maintainers
amp develop
The Advanced Multi-Physics (AMP) package. The Advanced Multi-Physics (AMP) package is an open sou...
1 version - Latest release: about 2 years ago
alquimia 1.0.9
Alquimia is an interface that exposes the capabilities of mature geochemistry codes such as Crunc...
6 versions - Latest release: about 2 years ago - 1 dependent package - 15 stars on GitHub - 2 maintainers
alps 2.3.0 removed
Algorithms for Physics Simulations Tags: Condensed Matter Physics, Computational Physics
1 version - Latest release: about 2 years ago
Top 1.8% on spack.io
adios2 2.8.0
The Adaptable Input Output System version 2, developed in the Exascale Computing Program
8 versions - Latest release: about 2 years ago - 17 dependent packages - 3 maintainers
Top 5.8% on spack.io
adios 1.13.1
The Adaptable IO System (ADIOS) provides a simple, flexible way for scientists to describe the da...
8 versions - Latest release: about 2 years ago - 4 dependent packages - 1 maintainer