Ecosyste.ms: Packages
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spack.io : orthofinder
OrthoFinder is a fast, accurate and comprehensive analysis tool for comparative genomics. It finds orthologues and orthogroups infers rooted gene trees for all orthogroups and infers a rooted species tree for the species being analysed. OrthoFinder also provides comprehensive statistics for comparative genomic analyses. OrthoFinder is simple to use and all you need to run it is a set of protein sequence files (one per species) in FASTA format.
Registry
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Source
- JSON
purl: pkg:spack/orthofinder
Keywords: gene-duplication, gene-trees, orthogroup, orthologs
License: Other
Latest release: 11 months ago
First release: about 2 years ago
Dependent packages: 1
Stars: 513 on GitHub
Forks: 174 on GitHub
See more repository details: repos.ecosyste.ms
Last synced: 21 days ago