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spack.io : py-snakemake-interface-common
Common functions and classes for Snakemake and its plugins.
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purl: pkg:spack/py-snakemake-interface-common
License: Other
Latest release: 3 months ago
First release: 3 months ago
Dependent packages: 22
Stars: 0 on GitHub
Forks: 0 on GitHub
See more repository details: repos.ecosyste.ms
Last synced: 16 days ago
py-snakemake-storage-plugin-zenodo 0.1.2
A Snakemake storage plugin for reading from and writing to zenodo.org.1 version - Latest release: 3 months ago - 1 stars on GitHub - 1 maintainer
py-snakemake-storage-plugin-gcs 0.1.3
A Snakemake storage plugin for Google Cloud Storage.1 version - Latest release: 3 months ago - 0 stars on GitHub - 1 maintainer
py-snakemake-storage-plugin-ftp 0.1.2
A Snakemake plugin for handling input and output via FTP.1 version - Latest release: 3 months ago - 0 stars on GitHub - 1 maintainer
py-snakemake-storage-plugin-s3 0.2.10
A Snakemake storage plugin for S3 API storage (AWS S3, MinIO, etc.).1 version - Latest release: 3 months ago - 0 stars on GitHub - 1 maintainer
py-snakemake-executor-plugin-flux 0.1.0
A Snakemake executor plugin for the Flux scheduler.1 version - Latest release: 3 months ago - 1 stars on GitHub - 1 maintainer
py-snakemake-storage-plugin-azure 0.1.4
A Snakemake storage plugin to read and write from Azure Blob Storage.1 version - Latest release: 3 months ago - 0 stars on GitHub - 1 maintainer
py-snakemake-interface-storage-plugins 3.1.0
This package provides a stable interface for interactions between Snakemake and its storage plugi...1 version - Latest release: 3 months ago - 9 dependent packages - 1 stars on GitHub - 1 maintainer
py-snakemake-storage-plugin-sftp 0.1.2
A Snakemake storage plugin that handles files on an SFTP server.1 version - Latest release: 3 months ago - 0 stars on GitHub - 1 maintainer
py-snakemake-storage-plugin-fs 0.2.0
A Snakemake storage plugin that reads and writes from a locally mounted filesystem using rsync.1 version - Latest release: 3 months ago - 1 stars on GitHub - 1 maintainer
py-snakemake-interface-executor-plugins 8.2.0
This package provides a stable interface for interactions between Snakemake and its executor plug...1 version - Latest release: 3 months ago - 11 dependent packages - 2 stars on GitHub - 1 maintainer
py-snakemake-storage-plugin-http 0.2.3
Snakemake storage plugin for downloading input files from HTTP(s).1 version - Latest release: 3 months ago - 0 stars on GitHub - 1 maintainer
py-snakemake-executor-plugin-slurm 0.3.2
A Snakemake executor plugin for submitting jobs to a SLURM cluster.1 version - Latest release: 3 months ago - 4 stars on GitHub - 1 maintainer
py-snakemake-executor-plugin-tes 0.1.2
A Snakemake executor plugin for submitting jobs via GA4GH TES.1 version - Latest release: 3 months ago - 0 stars on GitHub - 1 maintainer
py-snakemake-interface-report-plugins 1.0.0
The interface for Snakemake report plugins.1 version - Latest release: 3 months ago - 1 dependent package - 0 stars on GitHub - 1 maintainer
py-snakemake-executor-plugin-googlebatch 0.3.0
A Snakemake executor plugin.1 version - Latest release: 3 months ago - 0 stars on GitHub - 1 maintainer
py-snakemake-executor-plugin-kubernetes 0.1.4
A Snakemake executor plugin for submission of jobs to Kubernetes.1 version - Latest release: 3 months ago - 0 stars on GitHub - 1 maintainer
py-snakemake-executor-plugin-cluster-generic 1.0.7
A Snakemake executor plugin for submitting jobs to a cluster.1 version - Latest release: 3 months ago - 0 stars on GitHub - 1 maintainer
py-snakemake-executor-plugin-slurm-jobstep 0.1.10
A Snakemake executor plugin for running srun jobs inside of SLURM jobs (meant for internal use by...1 version - Latest release: 3 months ago - 1 dependent package - 0 stars on GitHub - 1 maintainer
py-snakemake-executor-plugin-azure-batch 0.1.3
A Snakemake executor plugin for submitting jobs to Microsoft Azure Batch.1 version - Latest release: 3 months ago - 1 stars on GitHub - 1 maintainer
py-snakemake-executor-plugin-drmaa 0.1.3
A snakemake executor plugin for submission of jobs via DRMAA.1 version - Latest release: 3 months ago - 1 stars on GitHub - 1 maintainer
py-snakemake-executor-plugin-cluster-sync 0.1.3
A Snakemake executor plugin for cluster jobs that are executed synchronously.1 version - Latest release: 3 months ago - 0 stars on GitHub - 1 maintainer
snakemake 8.5.2
Workflow management system to create reproducible and scalable data analyses.20 versions - Latest release: 3 months ago - 1 dependent package - 1 maintainer