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spack.io : r-exomecopy
Copy number variant detection from exome sequencing read depth. Detection of copy number variants (CNV) from exome sequencing samples, including unpaired samples. The package implements a hidden Markov model which uses positional covariates, such as background read depth and GC- content, to simultaneously normalize and segment the samples into regions of constant copy count.
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Source
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purl: pkg:spack/r-exomecopy
License: Other
Latest release: about 2 years ago
First release: about 2 years ago
Last synced: 22 days ago