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spack.io : r-sctransform
Variance Stabilizing Transformations for Single Cell UMI Data. A normalization method for single-cell UMI count data using a variance stabilizing transformation. The transformation is based on a negative binomial regression model with regularized parameters. As part of the same regression framework, this package also provides functions for batch correction, and data correction. See Hafemeister and Satija 2019 <doi:10.1101/576827> for more details.
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purl: pkg:spack/r-sctransform
License: Other
Latest release: over 1 year ago
First release: about 2 years ago
Dependent packages: 1
Last synced: 29 days ago