Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

spack.io packages

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Top 4.2% on spack.io
r-rjson 0.2.21
JSON for R. Converts R object into JSON objects and vice-versa.
4 versions - Latest release: about 2 years ago - 7 dependent packages - 1 maintainer
Top 4.9% on spack.io
libassuan 2.5.7
Libassuan is a small library implementing the so-called Assuan protocol.
7 versions - Latest release: 2 months ago - 5 dependent packages - 1 maintainer
py-gemini 0.30.2 removed
GEMINI (GEnome MINIng) is a flexible framework for exploring genetic variation in the context of ...
10 versions - Latest release: about 2 years ago - 1 maintainer
py-paramz 0.9.5
The Parameterization Framework.
1 version - Latest release: about 2 years ago - 1 dependent package - 47 stars on GitHub - 1 maintainer
perl-data-dumper-concise 2.023
Less indentation and newlines plus sub deparsing
1 version - Latest release: 2 months ago - 2 dependent packages - 1 maintainer
Top 9.5% on spack.io
r-nmf 0.24.0
Algorithms and Framework for Nonnegative Matrix Factorization (NMF). Provides a framework to perf...
4 versions - Latest release: almost 2 years ago - 2 dependent packages - 1 maintainer
vasp 6.3.2
The Vienna Ab initio Simulation Package (VASP) is a computer program for atomic scale materials ...
6 versions - Latest release: over 1 year ago
ncbi-toolkit 25_2_0
NCBI C++ Toolkit
4 versions - Latest release: over 1 year ago
hpcx-mpi removed
The HPC-X MPI implementation from NVIDIA/Mellanox based on OpenMPI. This package is for external ...
Latest release: over 1 year ago - 1 maintainer
r-mzr 2.28.0
parser for netCDF, mzXML, mzData and mzML and mzIdentML files (mass spectrometry data). mzR provi...
7 versions - Latest release: about 2 years ago - 1 dependent package - 1 maintainer
qtgraph 1.0.0.0
The baseline library used in the CUDA-centric Open|SpeedShop Graphical User Interface (GUI) which...
2 versions - Latest release: about 2 years ago - 1 dependent package - 6 stars on GitHub
sandbox 2.25
sandbox'd LD_PRELOAD hack by Gentoo Linux
2 versions - Latest release: 10 months ago
Top 7.1% on spack.io
r-pbapply 1.7-0
Adding Progress Bar to '*apply' Functions. A lightweight package that adds progress bar to vector...
10 versions - Latest release: 10 months ago - 5 dependent packages - 1 maintainer
perl-moosex-emulate-class-accessor-fast 0.009032
Emulate Class::Accessor::Fast behavior using Moose attributes
1 version - Latest release: 3 months ago - 2 dependent packages - 1 maintainer
py-python3-openid 3.2.0
OpenID support for modern servers and consumers.
1 version - Latest release: over 1 year ago - 1 dependent package - 40 stars on GitHub - 1 maintainer
gtkmm 2.19.7
Gtkmm is the official C++ interface for the popular GUI library GTK+.
8 versions - Latest release: about 2 years ago - 1 dependent package
Top 9.5% on spack.io
py-pydispatcher 2.0.5
Multi-producer-multi-consumer signal dispatching mechanism.
1 version - Latest release: about 2 years ago - 2 dependent packages - 1 maintainer
talass 2018-10-29
TALASS: Topological Analysis of Large-Scale Simulations This package compiles the talass tool cha...
1 version - Latest release: about 2 years ago - 1 maintainer
spectrum-mpi 10.4
IBM MPI implementation from Spectrum MPI.
1 version - Latest release: about 2 years ago - 1 dependent package
biopieces 2016-04-12
The Biopieces are a collection of bioinformatics tools that can be pieced together in a very easy...
1 version - Latest release: about 2 years ago
py-gitdb 4.0.9
The GitDB project implements interfaces to allow read and write access to git repositories.
5 versions - Latest release: about 2 years ago - 1 dependent package - 1 maintainer
rendercheck 1.5
rendercheck is a program to test a Render extension implementation against separate calculations ...
1 version - Latest release: about 2 years ago
keepalived 2.0.19
Keepalived implements a set of checkers to dynamically and adaptively maintain and manage loadba...
9 versions - Latest release: about 2 years ago
connect-proxy 1.105
`connect.c` is a simple relaying command to make network connection via SOCKS and https proxy. Th...
1 version - Latest release: about 2 years ago
Top 0.9% on spack.io
r-biostrings 2.62.0
Efficient manipulation of biological strings. Memory efficient string containers, string matching...
7 versions - Latest release: about 2 years ago - 35 dependent packages - 1 maintainer
Top 1.3% on spack.io
r-httr 1.4.5
Tools for Working with URLs and HTTP. Useful tools for working with HTTP organised by HTTP verbs ...
9 versions - Latest release: about 1 year ago - 30 dependent packages - 1 maintainer
mlocate 0.24
mlocate is a locate/updatedb implementation. The 'm' stands for "merging": updatedb reuses the ex...
3 versions - Latest release: about 2 years ago
portage 3.0.0
Portage is a framework that computational physics applications can use to build a highly customiz...
2 versions - Latest release: about 2 years ago - 1 maintainer
r-pkgcache 2.1.0
Cache 'CRAN'-Like Metadata and R Packages. Metadata and package cache for CRAN-like repositories....
5 versions - Latest release: 10 months ago - 1 dependent package - 1 maintainer
Top 8.6% on spack.io
py-torch-scatter 2.1.2
PyTorch Extension Library of Optimized Scatter Operations.
2 versions - Latest release: 10 days ago - 2 dependent packages - 1,460 stars on GitHub - 1 maintainer
ovito 3.6.0
OVITO is a scientific visualization and analysis software for atomistic and particle simulation d...
1 version - Latest release: about 2 years ago
r-countrycode 1.4.0
Convert Country Names and Country Codes. Countrycode standardizes country names, converts them in...
3 versions - Latest release: almost 2 years ago - 1 dependent package - 1 maintainer
Top 9.5% on spack.io
r-shortread 1.52.0
FASTQ input and manipulation. This package implements sampling, iteration, and input of FASTQ fil...
7 versions - Latest release: about 2 years ago - 2 dependent packages - 1 maintainer
kubernetes 1.27.2
Kubernetes is an open source system for managing containerized applications across multiple hosts...
6 versions - Latest release: 10 months ago - 1 maintainer
octave-instrctl 0.3.1
Instrument-Control is a package for interfacing the outside world of hardware via Serial, i2c or ...
1 version - Latest release: about 2 years ago - 1 dependent package
syscalc 1.1.7
A tool to derive theoretical systematic uncertainties
1 version - Latest release: about 2 years ago - 1 dependent package
r-cner 1.30.0
CNE Detection and Visualization. Large-scale identification and advanced visualization of sets of...
7 versions - Latest release: about 2 years ago - 1 dependent package - 1 maintainer
Top 4.2% on spack.io
coinutils 2.11.10
CoinUtils is an open-source collection of classes and helper functions that are generally useful ...
4 versions - Latest release: about 1 month ago - 6 dependent packages - 36 stars on GitHub
tophat 2.1.2
Spliced read mapper for RNA-Seq.
2 versions - Latest release: about 2 years ago
py-python-sotools 0.1.0
python-sotools is a collection of tools to work with ELF shared objects
1 version - Latest release: over 1 year ago - 1 maintainer
py-intbitset 3.0.1
The intbitset library provides a set implementation to store sorted unsigned integers either 32-b...
1 version - Latest release: almost 2 years ago - 1 dependent package - 20 stars on GitHub - 1 maintainer
perl-digest-md5-file 0.08
Digest::MD5::File - Perl extension for getting MD5 sums for files and urls.
1 version - Latest release: over 1 year ago - 1 dependent package
gffread 0.12.7
gffread: GFF/GTF utility providing format conversions, region filtering, FASTA sequence extractio...
1 version - Latest release: 8 months ago
py-aioitertools 0.11.0
Implementation of itertools, builtins, and more for AsyncIO and mixed- type iterables.
2 versions - Latest release: about 1 year ago - 1 dependent package - 1 maintainer
py-jupyter-packaging 0.12.0
Jupyter Packaging Utilities.
5 versions - Latest release: almost 2 years ago - 4 dependent packages - 60 stars on GitHub - 1 maintainer
Top 7.1% on spack.io
r-seqinr 4.2-30
Biological Sequences Retrieval and Analysis. Exploratory data analysis and data visualization for...
6 versions - Latest release: 10 months ago - 3 dependent packages - 1 maintainer
r-googlevis 0.7.1
R Interface to Google Charts. R interface to Google Charts API, allowing users to create interact...
7 versions - Latest release: 10 months ago - 1 maintainer
py-pynvim 0.4.3
Neovim python client
1 version - Latest release: about 2 years ago - 1 dependent package - 1 maintainer
cpp-argparse 2.9
Argument Parser for Modern C++
2 versions - Latest release: 10 months ago - 1,644 stars on GitHub - 1 maintainer
libndp 1.3
Libndp - Library for Neighbor Discovery Protocol
5 versions - Latest release: about 2 years ago
py-macholib 1.16
Python package for Mach-O header analysis and editing
2 versions - Latest release: 10 months ago - 1 dependent package - 1 maintainer
irep 1.0.0
IREP is a tool that enables mixed-language simulation codes to use a common, Lua-based format for...
1 version - Latest release: about 2 years ago - 2 maintainers
openpa 1.0.4
An open source, highly-portable library that provides atomic primitives (and related constructs) ...
5 versions - Latest release: about 2 years ago - 1 dependent package - 9 stars on GitHub
py-tatsu 4.4.0
TatSu (the successor to Grako) is a tool that takes grammars in a variation of EBNF as input, and...
1 version - Latest release: about 2 years ago - 1 dependent package - 348 stars on GitHub - 1 maintainer
librdkafka 2.2.0
librdkafka is a C library implementation of the Apache Kafka protocol.
8 versions - Latest release: 9 months ago - 6,583 stars on GitHub
openfdtd 2.7.3
OpenFDTD is general purpose FDTD simulator applicable to a wide range of applications. The FDTD m...
5 versions - Latest release: about 2 years ago
rocsparse 6.1.0
rocSPARSE exposes a common interface that provides Basic Linear Algebra Subroutines for sparse co...
32 versions - Latest release: 1 day ago - 4 dependent packages - 95 stars on GitHub - 3 maintainers
flap master
Fortran command Line Arguments Parser
1 version - Latest release: about 2 years ago - 132 stars on GitHub - 1 maintainer
r-udunits2 0.13.2
Udunits-2 Bindings for R. Provides simple bindings to Unidata's udunits library.
3 versions - Latest release: about 2 years ago - 1 dependent package - 1 maintainer
py-flaky 3.7.0
Flaky is a plugin for nose or pytest that automatically reruns flaky tests.
1 version - Latest release: about 1 year ago - 330 stars on GitHub - 1 maintainer
clara 1.1.5
A simple to use, composable, command line parser for C++ 11 and beyond.
6 versions - Latest release: about 2 years ago - 1 dependent package - 647 stars on GitHub - 1 maintainer
spiral-software
SPIRAL is a program generation system for linear transforms and other mathematical functions that...
Latest release: 3 days ago - 1 maintainer
Top 7.9% on spack.io
py-azure-mgmt-datamigration 4.0.0
Microsoft Azure Data Migration Client Library for Python.
2 versions - Latest release: about 2 years ago - 1 dependent package - 3,549 stars on GitHub - 1 maintainer
r-chron 2.3-60
Chronological objects which can handle dates and times. Provides chronological objects which can ...
7 versions - Latest release: 10 months ago - 1 dependent package - 1 maintainer
bcl2fastq2 2.19.1.403
The bcl2fastq2 Conversion Software converts base call (BCL) files from a sequencing run into FAST...
2 versions - Latest release: about 2 years ago - 1 dependent package
Top 9.9% on spack.io
libfastcommon 1.0.43
Libfastcommon is a c common functions library extracted from my open source project FastDFS. thi...
5 versions - Latest release: about 2 years ago - 1 dependent package - 861 stars on GitHub
Top 9.5% on spack.io
py-pytorch-lightning 2.0.0
PyTorch Lightning is the lightweight PyTorch wrapper for ML researchers.
32 versions - Latest release: 10 months ago - 4 dependent packages - 24,008 stars on GitHub - 1 maintainer
py-pydeface 2.0.2
A script to remove facial structure from MRI images.
1 version - Latest release: about 1 year ago - 1 dependent package - 1 maintainer
Top 5.8% on spack.io
mash 2.3
Fast genome and metagenome distance estimation using MinHash.
1 version - Latest release: about 2 years ago - 4 dependent packages - 1 maintainer
py-pycifrw 4.4.1
Python library for interacting with Crystallographic Information Framework (CIF) files.
1 version - Latest release: about 2 years ago - 1 maintainer
Top 5.8% on spack.io
libssh 0.8.9
libssh: the SSH library
3 versions - Latest release: 10 months ago - 4 dependent packages
r-conquer 1.3.3
Convolution-Type Smoothed Quantile Regression. Fast and accurate convolution-type smoothed quanti...
5 versions - Latest release: about 1 year ago - 1 dependent package - 1 maintainer
py-tensorflow-metadata 1.10.0
Library and standards for schema and statistics. TensorFlow Metadata provides standard representa...
2 versions - Latest release: over 1 year ago - 1 dependent package - 1 maintainer
migraphx 6.1.0
AMD's graph optimization engine.
32 versions - Latest release: 1 day ago - 1 dependent package - 148 stars on GitHub - 2 maintainers
Top 5.8% on spack.io
py-click-plugins 1.1.1
An extension module for py-click to register external CLI commands via setuptools entry-points.
2 versions - Latest release: about 2 years ago - 4 dependent packages - 1 maintainer
muscle5 5.1.0
MUSCLE is widely-used software for making multiple alignments of biological sequences.
1 version - Latest release: about 1 year ago - 1 dependent package - 1 maintainer
perl-file-spec 0.90
File::Spec - Perl extension for portably performing operations on file names
1 version - Latest release: 6 months ago - 1 dependent package
py-linecache2 1.0.0
Backports of the linecache module
1 version - Latest release: about 2 years ago - 1 dependent package - 1 stars on GitHub - 1 maintainer
Top 4.2% on spack.io
pixman 0.42.2
The Pixman package contains a library that provides low-level pixel manipulation features such as...
7 versions - Latest release: over 1 year ago - 6 dependent packages
openimagedenoise 2.2.2
Intel Open Image Denoise is an open source library of high-performance, high-quality denoising fi...
10 versions - Latest release: about 1 month ago - 1 dependent package
xhmm 20160104
The XHMM C++ software suite was written to call copy number variation (CNV) from next-generation ...
1 version - Latest release: about 2 years ago
wgrib2 3.1.1
Utility for interacting with GRIB2 files
5 versions - Latest release: over 1 year ago - 1 dependent package - 4 maintainers
Top 9.5% on spack.io
perl-test-fatal 0.017
Incredibly simple helpers for testing code with exceptions
2 versions - Latest release: 10 months ago - 17 dependent packages
perl-test-warnings 0.031
Test for warnings and the lack of them
2 versions - Latest release: 10 months ago - 5 dependent packages
Top 9.5% on spack.io
perl-time-hires 1.9758
High resolution alarm, sleep, gettimeofday, interval timers
2 versions - Latest release: 10 months ago - 3 dependent packages
icarus v10_3
Icarus Verilog is a Verilog simulation and synthesis tool.
1 version - Latest release: about 2 years ago - 1 maintainer
filo main
File flush and fetch, with MPI
1 version - Latest release: about 2 years ago - 0 stars on GitHub
soapdenovo-trans 1.0.5
SOAPdenovo-Trans is a de novo transcriptome assembler basing on the SOAPdenovo framework, adapt t...
2 versions - Latest release: about 2 years ago - 28 stars on GitHub - 1 maintainer
spiral-package-fftx
This is the SPIRAL package for FFTX: FFTX is the exascale follow-on to the FFTW open source discr...
Latest release: 3 days ago - 1 maintainer
hisat2 2.2.1
HISAT2 is a fast and sensitive alignment program for mapping next- generation sequencing reads (w...
3 versions - Latest release: over 1 year ago - 1 dependent package
Top 7.1% on spack.io
r-fastmap 1.1.1
Fast Implementation of a Key-Value Store. Fast implementation of a key- value store. Environments...
3 versions - Latest release: about 1 year ago - 3 dependent packages - 1 maintainer
py-pygithub 2.1.1
Typed interactions with the GitHub API v3
3 versions - Latest release: 6 months ago - 1 dependent package - 1 maintainer
Top 7.1% on spack.io
openfast 2.6.0
Wind turbine simulation package from NREL
10 versions - Latest release: about 2 years ago - 3 dependent packages - 1 maintainer
r-complexheatmap 2.10.0
Make Complex Heatmaps. Complex heatmaps are efficient to visualize associations between different...
7 versions - Latest release: about 2 years ago - 1 dependent package - 1 maintainer
py-cssselect2 0.7.0 💰
cssselect2 is a straightforward implementation of CSS4 Selectors for markup documents (HTML, XML...
1 version - Latest release: 4 months ago - 1 dependent package - 24 stars on GitHub - 1 maintainer
py-wesanderson 0.0.3
color palettes from Wes Anderson films, based on Karthik Ram's R version.
1 version - Latest release: about 1 year ago - 1 maintainer
r-pheatmap 1.0.12
Pretty Heatmaps. Implementation of heatmaps that offers more control over dimensions and appearan...
1 version - Latest release: about 2 years ago - 1 maintainer
py-mmcv 0.5.1
MMCV is a foundational python library for computer vision research and supports many research pro...
1 version - Latest release: about 2 years ago - 1 maintainer
rsem 1.3.3
RSEM is a software package for estimating gene and isoform expression levels from RNA-Seq data.
3 versions - Latest release: 10 months ago - 1 dependent package
py-sphinx-theme-builder 0.2.0b2
A tool for authoring Sphinx themes with a simple (opinionated) workflow.
1 version - Latest release: 8 months ago - 3 dependent packages - 1 maintainer