Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "cwl" keyword
sevenbridges-cwl-draft2-upgrader 0.4.0
Seven Bridges CWL sbg:draft2 to v1.0 upgrader.7 versions - Latest release: over 3 years ago - 1 dependent repositories - 21 downloads last month - 6 stars on GitHub - 1 maintainer
ggr-cwl-ipynb-gen 0.5.0
IPython notebook generator for GGR CWL processing pipelines of genomic data1 version - Latest release: over 2 years ago - 1 dependent repositories - 7 downloads last month - 0 stars on GitHub - 1 maintainer
ipython2cwlmosorio 0.0.5
Convert IPython Jupyter Notebooks to CWL tool1 version - Latest release: about 3 years ago - 1 dependent repositories - 52 downloads last month - 2 stars on GitHub - 1 maintainer
scriptcwl 0.8.1
Tool to generate CWL workflows13 versions - Latest release: almost 5 years ago - 1 dependent package - 2 dependent repositories - 54 downloads last month - 40 stars on GitHub - 2 maintainers
Top 5.5% on pypi.org
690 versions - Latest release: about 2 months ago - 11 dependent repositories - 6.93 thousand downloads last month - 365 stars on GitHub - 1 maintainer
arvados-python-client 2.7.2
Arvados client library690 versions - Latest release: about 2 months ago - 11 dependent repositories - 6.93 thousand downloads last month - 365 stars on GitHub - 1 maintainer
Top 9.9% on pypi.org
362 versions - Latest release: about 2 months ago - 5 dependent repositories - 1.56 thousand downloads last month - 365 stars on GitHub - 1 maintainer
arvados-cwl-runner 2.7.2
Arvados Common Workflow Language runner362 versions - Latest release: about 2 months ago - 5 dependent repositories - 1.56 thousand downloads last month - 365 stars on GitHub - 1 maintainer
benten 2021.1.5
CWL language server developed by Seven Bridges15 versions - Latest release: over 3 years ago - 1 dependent repositories - 122 downloads last month - 66 stars on GitHub - 3 maintainers
cwlprov 0.1.1 💰
cwlprov API for Python1 version - Latest release: over 5 years ago - 1 dependent package - 2 dependent repositories - 28 downloads last month - 2 stars on GitHub - 1 maintainer
Top 1.8% on pypi.org
428 versions - Latest release: about 2 months ago - 20 dependent packages - 203 dependent repositories - 91.3 thousand downloads last month - 321 stars on GitHub - 4 maintainers
cwltool 3.1.20240404144621 💰
Common workflow language reference implementation428 versions - Latest release: about 2 months ago - 20 dependent packages - 203 dependent repositories - 91.3 thousand downloads last month - 321 stars on GitHub - 4 maintainers
Top 5.3% on pypi.org
45 versions - Latest release: about 1 month ago - 2 dependent packages - 69 dependent repositories - 21.7 thousand downloads last month - 17 stars on GitHub - 3 maintainers
cwltest 2.5.20240425111257 💰
Common Workflow Language testing framework45 versions - Latest release: about 1 month ago - 2 dependent packages - 69 dependent repositories - 21.7 thousand downloads last month - 17 stars on GitHub - 3 maintainers
mycwl 0.0.1
CWL based MySQL Database1 version - Latest release: over 1 year ago - 11 downloads last month - 1 maintainer
Top 9.2% on pypi.org
44 versions - Latest release: 9 months ago - 2 dependent packages - 4 dependent repositories - 248 downloads last month - 39 stars on GitHub - 3 maintainers
janis-pipelines 0.13.1
Contains classes and helpers to build a workflow, and provide options to convert to CWL / WDL44 versions - Latest release: 9 months ago - 2 dependent packages - 4 dependent repositories - 248 downloads last month - 39 stars on GitHub - 3 maintainers
ipython2cwl 0.0.4
Convert IPython Jupyter Notebooks to CWL tool4 versions - Latest release: almost 4 years ago - 1 dependent repositories - 40 downloads last month - 2 stars on GitHub - 1 maintainer
nlppln 0.3.3
NLP pipeline software using common workflow language5 versions - Latest release: over 5 years ago - 1 dependent repositories - 21 downloads last month - 34 stars on GitHub - 2 maintainers
toil-cwl-runner 1.0rc0
Pipeline management software for clusters using CWL.1 version - Latest release: about 3 years ago - 1 dependent repositories - 23 downloads last month - 874 stars on GitHub - 3 maintainers
arvados_fuse 2.7.2
Arvados FUSE driver503 versions - Latest release: about 2 months ago - 2 dependent repositories - 1.28 thousand downloads last month - 365 stars on GitHub - 1 maintainer
arvados-pam 2.0.4
Arvados PAM module32 versions - Latest release: almost 4 years ago - 68 downloads last month - 365 stars on GitHub - 1 maintainer
crunchstat_summary 2.7.2
Arvados crunchstat-summary reads crunch log files and summarizes resource usage20 versions - Latest release: about 2 months ago - 92 downloads last month - 365 stars on GitHub - 1 maintainer
Top 9.4% on pypi.org
19 versions - Latest release: about 2 years ago - 4 dependent repositories - 360 downloads last month - 7 stars on GitHub - 4 maintainers
sbpack 2022.3.16
Command line tool to upload and download CWL to and from SB powered platforms.19 versions - Latest release: about 2 years ago - 4 dependent repositories - 360 downloads last month - 7 stars on GitHub - 4 maintainers
Top 2.6% on pypi.org
451 versions - Latest release: 3 months ago - 4 dependent packages - 37 dependent repositories - 8.67 thousand downloads last month - 857 stars on GitHub - 4 maintainers
toil 6.1.0
Pipeline management software for clusters.451 versions - Latest release: 3 months ago - 4 dependent packages - 37 dependent repositories - 8.67 thousand downloads last month - 857 stars on GitHub - 4 maintainers
wrabbit 0.1.0
Package that helps convert prepare Nextflow to be run on SevenBridges supported platforms.3 versions - Latest release: 26 days ago - 1 maintainer
Top 4.3% on pypi.org
33 versions - Latest release: about 2 months ago - 10 dependent packages - 38 dependent repositories - 93.5 thousand downloads last month - 31 stars on GitHub - 2 maintainers
cwl-utils 0.33 💰
Python utilities for CWL33 versions - Latest release: about 2 months ago - 10 dependent packages - 38 dependent repositories - 93.5 thousand downloads last month - 31 stars on GitHub - 2 maintainers
Top 8.4% on pypi.org
6 versions - Latest release: over 2 years ago - 3 dependent packages - 10 dependent repositories - 2.38 thousand downloads last month - 9 stars on GitHub - 2 maintainers
cwlformat 2022.2.18
A prettifier for CWL code6 versions - Latest release: over 2 years ago - 3 dependent packages - 10 dependent repositories - 2.38 thousand downloads last month - 9 stars on GitHub - 2 maintainers
sevenbridges-cwl 1.1.4
SBG Python library to create CWL tools and workflows5 versions - Latest release: about 3 years ago - 1 dependent repositories - 27 downloads last month - 19 stars on GitHub - 1 maintainer
Top 9.3% on pypi.org
35 versions - Latest release: over 2 years ago - 3 dependent repositories - 179 downloads last month - 181 stars on GitHub - 1 maintainer
cwl-airflow 1.2.11
Python package to extend Airflow functionality with CWL v1.1 support35 versions - Latest release: over 2 years ago - 3 dependent repositories - 179 downloads last month - 181 stars on GitHub - 1 maintainer
illusional.cwlgen 0.0.5 💰
Fork of python-cwlgen | Generation of CWL programmatically. Avaible types: CommandLineTool, Workf...5 versions - Latest release: over 5 years ago - 1 dependent package - 30 downloads last month - 321 stars on GitHub - 1 maintainer
Top 7.8% on pypi.org
25 versions - Latest release: 6 months ago - 2 dependent packages - 24 dependent repositories - 89.1 thousand downloads last month - 5 stars on GitHub - 2 maintainers
cwl-upgrader 1.2.11 💰
Upgrade a CWL tool or workflow document from one version to another25 versions - Latest release: 6 months ago - 2 dependent packages - 24 dependent repositories - 89.1 thousand downloads last month - 5 stars on GitHub - 2 maintainers
Top 7.6% on pypi.org
281 versions - Latest release: 5 months ago - 1 dependent package - 4 dependent repositories - 3.11 thousand downloads last month - 68 stars on GitHub - 6 maintainers
tibanna 5.2.0
Tibanna runs portable pipelines (in CWL/WDL) on the AWS Cloud.281 versions - Latest release: 5 months ago - 1 dependent package - 4 dependent repositories - 3.11 thousand downloads last month - 68 stars on GitHub - 6 maintainers
biowardrobe-cwl-workflows 1.0.20181213214400
Wrapped BioWardrobe's CWL files5 versions - Latest release: over 5 years ago - 1 dependent repositories - 37 downloads last month - 14 stars on GitHub - 1 maintainer
reana 0.6.1
REANA - Reusable Analyses4 versions - Latest release: almost 4 years ago - 1 dependent repositories - 29 downloads last month - 121 stars on GitHub - 1 maintainer
benchmark-4dn 0.5.23
Benchmark functions that returns total space, mem, cpu given input size and parameters for the CW...22 versions - Latest release: about 1 year ago - 2 dependent packages - 5 dependent repositories - 460 downloads last month - 0 stars on GitHub - 2 maintainers
cwlkernel 0.0.4
CWL Jupyter Notebook Kernel2 versions - Latest release: almost 4 years ago - 1 dependent repositories - 40 downloads last month - 4 stars on GitHub - 1 maintainer
Top 4.1% on pypi.org
1 version - Latest release: almost 8 years ago - 2 dependent packages - 36 dependent repositories - 1.23 thousand downloads last month - 1,441 stars on GitHub - 2 maintainers
cwlref-runner 1.0 💰
Common workflow language reference implementation1 version - Latest release: almost 8 years ago - 2 dependent packages - 36 dependent repositories - 1.23 thousand downloads last month - 1,441 stars on GitHub - 2 maintainers
wdl2cwl 0.2.2
Convertion from WDL workflow descriptions to CWL3 versions - Latest release: over 7 years ago - 1 dependent repositories - 9 downloads last month - 28 stars on GitHub - 1 maintainer
tooldog 0.3.5
Tool description generator (from https//bio.tools to XML and CWL)8 versions - Latest release: over 6 years ago - 1 dependent repositories - 37 downloads last month - 2 maintainers
toil-msk 3.21.1
Pipeline management software for clusters.2 versions - Latest release: almost 4 years ago - 1 dependent repositories - 31 downloads last month - 871 stars on GitHub - 1 maintainer
rabix 0.8.0 💰
Reproducible Analyses for Bioinformatics18 versions - Latest release: over 8 years ago - 3 dependent repositories - 61 downloads last month - 1,441 stars on GitHub - 1 maintainer
Top 7.5% on pypi.org
62 versions - Latest release: 9 months ago - 5 dependent packages - 9 dependent repositories - 145 downloads last month - 3 stars on GitHub - 3 maintainers
janis-pipelines.core 0.13.1
Workflow language + translation utilities to convert workflows from one language to another62 versions - Latest release: 9 months ago - 5 dependent packages - 9 dependent repositories - 145 downloads last month - 3 stars on GitHub - 3 maintainers
Top 8.8% on pypi.org
19 versions - Latest release: 12 months ago - 4 dependent packages - 3 dependent repositories - 190 downloads last month - 39 stars on GitHub - 3 maintainers
janis-pipelines.unix 0.12.0
Unix tools and data types for Janis19 versions - Latest release: 12 months ago - 4 dependent packages - 3 dependent repositories - 190 downloads last month - 39 stars on GitHub - 3 maintainers
Top 8.3% on pypi.org
1 version - Latest release: about 4 years ago - 1 dependent package - 25 dependent repositories - 20.4 thousand downloads last month - 4 stars on GitHub - 2 maintainers
galaxy2cwl 0.1.4
Convert a Galaxy workflow to abstract Common Workflow Language (CWL)1 version - Latest release: about 4 years ago - 1 dependent package - 25 dependent repositories - 20.4 thousand downloads last month - 4 stars on GitHub - 2 maintainers
cwl-tes 0.3.0
Common workflow language reference implementation backended by a GA4GH Task Execution Service7 versions - Latest release: over 4 years ago - 1 dependent repositories - 32 downloads last month - 18 stars on GitHub - 2 maintainers
cwlgen-kclhi 0.4.0 💰
Generation of CWL programmatically. Available types: Workflow, CommandLineTool and Requirements1 version - Latest release: about 4 years ago - 1 dependent repositories - 29 downloads last month - 1,441 stars on GitHub - 1 maintainer
Top 6.1% on pypi.org
12 versions - Latest release: almost 4 years ago - 6 dependent packages - 3 dependent repositories - 366 downloads last month - 29 stars on GitHub - 2 maintainers
cwlgen 0.4.2
Generation of CWL programmatically. Available types: Workflow, CommandLineTool and Requirements12 versions - Latest release: almost 4 years ago - 6 dependent packages - 3 dependent repositories - 366 downloads last month - 29 stars on GitHub - 2 maintainers
biowardrobe-airflow-analysis 1.0.20181214162558
Replaces BioWardrobe's backend with CWL Airflow4 versions - Latest release: over 5 years ago - 24 downloads last month - 5 stars on GitHub - 1 maintainer
Top 4.5% on pypi.org
17 versions - Latest release: 3 months ago - 10 dependent packages - 40 dependent repositories - 21.9 thousand downloads last month - 42 stars on GitHub - 3 maintainers
rocrate 0.10.0
RO-Crate metadata generator/parser17 versions - Latest release: 3 months ago - 10 dependent packages - 40 dependent repositories - 21.9 thousand downloads last month - 42 stars on GitHub - 3 maintainers
cwl_runner 1.0 💰
Common workflow language reference implementation1 version - Latest release: almost 9 years ago - 1 dependent repositories - 171 downloads last month - 1,441 stars on GitHub - 3 maintainers
cwltool_service 1.0.1 💰
Common workflow language runner service2 versions - Latest release: over 8 years ago - 2 dependent repositories - 17 downloads last month - 1,441 stars on GitHub - 2 maintainers
calrissian 0.16.0
CWL runner for Kubernetes19 versions - Latest release: 6 months ago - 1 dependent repositories - 239 downloads last month - 40 stars on GitHub - 4 maintainers
acclimatise 1.2.0
Acclimatise is a Python library and command-line utility for parsing the help output of a command...41 versions - Latest release: over 3 years ago - 348 downloads last month - 14 stars on GitHub - 1 maintainer
Related Keywords
workflow
25
common-workflow-language
22
python
15
bioinformatics
14
commonwl
11
workflows
10
containers
9
wdl
9
aws
9
sciworkflows
8
docker
7
science
7
pipeline
6
kubernetes
5
workflow-engine
5
ruby
5
go
5
genomics
5
gcp
5
cluster
5
cloud
5
bigdata
5
azure
5
arvados
5
seven
4
bridges
4
common
4
language
4
galaxy
4
pipelines
4
jupyter-notebook
3
workflow-description-language
3
gridengine
3
mesos
3
slurm
3
cwl-workflow
2
nextflow
2
wdl-workflow
2
biowardrobe
2
tibanna
2
biohackcovid20
2
ro-crate
2
common workflow language
2
sevenbridges
2
research-object
1
epigenetics
1
rna-seq
1
reproducible-research
1
reproducible-workflows
1
research-data
1
reusable-science
1
benchmark
1
4dn
1
biotools
1
development
1
xml
1
janis
1
translation
1
sbg
1
galaxy-workflows
1
workflowhub
1
airflow
1
cwltool
1
researchobject
1
ro
1
metadata
1
jsonld
1
biohackeu20
1
cwl-workflows
1
cli
1
parser
1
bagit
1
provenance
1
text-mining
1
nlp
1
cwlprov
1
prov
1
language-server
1
ide
1
velsera
1
editor
1
code-formatter
1
cwl-airflow
1
cwl-descriptor
1
dag
1
cwl-documents
1
aws-lambda
1
aws-step-function
1
conda
1
snakemake
1
snakemake-workflow
1
jupyter-notebook-generator
1
atac-seq
1
bioinformatics-analysis
1
bioinformatics-pipeline
1
genomics-data
1
chip-seq
1
clip-seq
1