Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "enrichment" keyword
enrichrpy 0.1.0
A tool for gene set enrichment (GSEA) plots and analysis in Python. Built on top of Enrichr API.2 versions - Latest release: almost 2 years ago - 1 dependent package - 34 downloads last month - 0 stars on GitHub - 1 maintainer
pytarget 0.0.3
neTwork bAsed enRichment of Gene sETs3 versions - Latest release: almost 7 years ago - 1 dependent repositories - 10 downloads last month - 1 maintainer
oc-graphenricher 0.2.5
A tool to enrich any OCDM compliant Knowledge Graph, finding new identifiers and deduplicating en...7 versions - Latest release: 8 months ago - 1 dependent repositories - 18 downloads last month - 10 stars on GitHub - 1 maintainer
enrich-omics 0.2.1
Package to perform enrichment analysis in python using EnrichR and OpenTargets APIs21 versions - Latest release: over 2 years ago - 1 dependent repositories - 77 downloads last month - 17 stars on GitHub - 1 maintainer
e3enrich 1.0.0
E3ligase enrichment Python package1 version - Latest release: over 2 years ago - 1 dependent repositories - 8 downloads last month - 1 maintainer
Top 8.6% on pypi.org
12 versions - Latest release: over 3 years ago - 4 dependent packages - 9 dependent repositories - 761 downloads last month - 25 stars on GitHub - 2 maintainers
reactome2py 3.0.0
Python client for Reactome content and analysis service API calls.12 versions - Latest release: over 3 years ago - 4 dependent packages - 9 dependent repositories - 761 downloads last month - 25 stars on GitHub - 2 maintainers
kinenrich 0.1.0
Kinase Activity Profiling Analysis1 version - Latest release: over 2 years ago - 1 dependent repositories - 6 downloads last month - 1 maintainer
peopledatalabs 3.1.0
Official Python client for the People Data Labs API29 versions - Latest release: 27 days ago - 2 dependent repositories - 37.8 thousand downloads last month - 17 stars on GitHub - 1 maintainer
ube3-apa 1.3.1
Ub E3 ligase Activity Profiling Analysis6 versions - Latest release: about 2 years ago - 1 dependent repositories - 31 downloads last month - 1 maintainer
tetoolkit 2.0.3
Tools for estimating differential enrichment of Transposable Elements and other highly repetitive...7 versions - Latest release: almost 6 years ago - 1 dependent repositories - 29 downloads last month - 1,732 stars on GitHub - 1 maintainer
apafea 0.0.9
visualizes genes functional enrichment9 versions - Latest release: about 2 years ago - 21 downloads last month - 1 maintainer
Top 10.0% on pypi.org
41 versions - Latest release: over 4 years ago - 3 dependent packages - 8 dependent repositories - 1.32 thousand downloads last month - 13 stars on GitHub - 1 maintainer
xlmhg 2.5.4
XL-mHG: A Semiparametric Test for Enrichment41 versions - Latest release: over 4 years ago - 3 dependent packages - 8 dependent repositories - 1.32 thousand downloads last month - 13 stars on GitHub - 1 maintainer
cometsc 0.1.13
XL-mHG: A Semiparametric Test for Enrichment in Ranked Lists.8 versions - Latest release: almost 3 years ago - 95 downloads last month - 13 stars on GitHub - 2 maintainers
georich 0.1.1 💰
Enrich your Geospatial Data!3 versions - Latest release: about 6 years ago - 1 dependent repositories - 7 downloads last month - 0 stars on GitHub - 1 maintainer
seqtables 0.11
Package for efficient analysis of next generation sequencing amplicon data using numpy and datafr...2 versions - Latest release: over 4 years ago - 1 dependent repositories - 10 downloads last month - 5 stars on GitHub - 1 maintainer
Top 6.1% on pypi.org
11 versions - Latest release: 4 months ago - 11 dependent packages - 2 dependent repositories - 5.33 thousand downloads last month - 141 stars on GitHub - 1 maintainer
decoupler 1.6.0
Ensemble of methods to infer biological activities from omics data11 versions - Latest release: 4 months ago - 11 dependent packages - 2 dependent repositories - 5.33 thousand downloads last month - 141 stars on GitHub - 1 maintainer
pymemesuite 0.1.0a2
Cython bindings and Python interface to the MEME suite.2 versions - Latest release: about 1 year ago - 1 dependent package - 1 dependent repositories - 205 downloads last month - 10 stars on GitHub - 1 maintainer
spatialauc
Python package for gene set enrichment in spatial transcriptomic data1 version
gaiaassociation 1.2.4
Compare ATAC-seq data to loci.13 versions - Latest release: about 2 months ago - 164 downloads last month - 1 maintainer
xcell 1.1.0.1
Python CLI and module for running the xCell package with Python Pandas inputs and outputs.2 versions - Latest release: over 6 years ago - 1 dependent repositories - 17 downloads last month - 1 stars on GitHub - 1 maintainer
enrichwrap 0.0.64
A small package testing calling out to third party enrichment63 versions - Latest release: over 1 year ago - 1 dependent repositories - 273 downloads last month - 1 maintainer
tetranscripts 2.2.3
Tools for estimating differential enrichment of Transposable Elements and other highly repetitive...11 versions - Latest release: almost 2 years ago - 1 dependent repositories - 81 downloads last month - 199 stars on GitHub - 2 maintainers
telocal 1.1.1
Tool for estimating differential enrichment of Transposable Elements and other highly repetitive ...1 version - Latest release: about 2 months ago - 49 downloads last month - 19 stars on GitHub - 1 maintainer
pyeti-python3 1.1
Revival version of pyeti, the API for Yeti Threat Intel Platform.2 versions - Latest release: about 3 years ago - 1 dependent repositories - 555 downloads last month - 17 stars on GitHub - 1 maintainer
tissue_enrichment_analysis 0.17.6
This package contains all the software used to implement TEA in WormBase and remotely38 versions - Latest release: about 6 years ago - 3 dependent repositories - 475 downloads last month - 6 stars on GitHub - 1 maintainer
gsva 1.0.6
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and o...7 versions - Latest release: almost 6 years ago - 1 dependent repositories - 132 downloads last month - 11 stars on GitHub - 1 maintainer
goldwasher 0.2.9
Light wrapper for the R topGO package that produces interactive GO enrichment html reports6 versions - Latest release: about 6 years ago - 1 dependent repositories - 26 downloads last month - 0 stars on GitHub - 1 maintainer
netinfo 0.0.2
Client to interact with Netinfo services.2 versions - Latest release: over 5 years ago - 1 dependent repositories - 58 downloads last month - 71 stars on GitHub - 1 maintainer
sharepathway 0.5.0
A Python package for KEGG pathway enrichment analysis with multiple gene lists10 versions - Latest release: over 9 years ago - 3 dependent repositories - 53 downloads last month - 35 stars on GitHub - 1 maintainer
python-fullcontact 4.0.0
Client library for FullContact V3 Enrich and Resolve APIs11 versions - Latest release: almost 2 years ago - 1 dependent repositories - 298 downloads last month - 7 stars on GitHub - 1 maintainer
kapa 0.0.1
Kinase Activity Profiling Analysis1 version - Latest release: over 2 years ago - 1 dependent repositories - 15 downloads last month - 1 maintainer
gsea-api 0.3.4 💰
Pandas API for Gene Set Enrichment Analysis in Python (GSEApy, cudaGSEA, GSEA)13 versions - Latest release: about 4 years ago - 1 dependent repositories - 82 downloads last month - 14 stars on GitHub - 1 maintainer
gedspy 2.1.3
GEDSpy34 versions - Latest release: 9 months ago - 1 dependent repositories - 128 downloads last month - 0 stars on GitHub - 1 maintainer
Top 4.2% on pypi.org
13 versions - Latest release: over 1 year ago - 26 dependent repositories - 9.58 thousand downloads last month - 411 stars on GitHub - 1 maintainer
cortexutils 2.2.0
A Python library for including utility classes for Cortex analyzers and responders13 versions - Latest release: over 1 year ago - 26 dependent repositories - 9.58 thousand downloads last month - 411 stars on GitHub - 1 maintainer
peopledatalabs-python 1.0.1 removed
Python client for the People Data Labs API2 versions - Latest release: about 2 years ago
Related Keywords
python
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bioinformatics
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transcriptomics
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fullcontact-api
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resolve
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cuda
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GSEApy
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cudaGSEA
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gene-set-enrichment
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gene-sets
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RNA_seq
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pathways
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interactions
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gene ontology
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peopledatalabs
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