Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "fluorescence" keyword
pyeem 0.2.1
Python library for the preprocessing, correction, deconvolution and analysis of Excitation Emissi...4 versions - Latest release: almost 3 years ago - 1 dependent repositories - 30 downloads last month - 6 stars on GitHub - 1 maintainer
prbdes 0.1.2
Probe design originails for FISH by Quentin Verron3 versions - Latest release: about 1 month ago - 79 downloads last month - 2 stars on GitHub - 1 maintainer
hts-tools 0.0.3
Parsing and analysing platereader absorbance and fluorescence data.4 versions - Latest release: 6 months ago - 1 dependent repositories - 20 downloads last month - 0 stars on GitHub - 1 maintainer
icsdll 2024.1.6
Interface to the image correlation spectroscopy library ICSx64.dll5 versions - Latest release: 5 months ago - 1 dependent package - 1 dependent repositories - 77 downloads last month - 1 stars on GitHub - 1 maintainer
fretbursts 0.7.1
Burst analysis toolkit for single and multi-spot smFRET data.24 versions - Latest release: over 1 year ago - 2 dependent repositories - 3.55 thousand downloads last month - 11 stars on GitHub - 2 maintainers
codfish 0.0.1
Complementary Oligonucleotide Design for Fluorescence In Situ Hybridization1 version - Latest release: about 6 years ago - 9 downloads last month - 1 maintainer
smo 2.0.2
Implementation of the Silver Mountain Operator (SMO) for the estimation of background distributions.5 versions - Latest release: over 1 year ago - 1 dependent repositories - 101 downloads last month - 12 stars on GitHub - 1 maintainer
pyfrp 1.1.13
PyFRAP: A Python based FRAP analysis tool box9 versions - Latest release: over 6 years ago - 1 dependent repositories - 40 downloads last month - 17 stars on GitHub - 1 maintainer
fish-prode 1.1.0
A FISH probe design web interface.3 versions - Latest release: almost 6 years ago - 1 dependent repositories - 27 downloads last month - 8 stars on GitHub - 1 maintainer
ifpd2q 1.0.4
An iFISH probe design pipeline (II)5 versions - Latest release: 3 months ago - 2 dependent packages - 155 downloads last month - 0 stars on GitHub - 1 maintainer
ifpd 2.1.1
An iFISH probe design pipeline, with web interface included.21 versions - Latest release: over 2 years ago - 1 dependent repositories - 72 downloads last month - 8 stars on GitHub - 1 maintainer
agons-nano 1.1.9.6
Package to use Yigit Lab developed AGONS algorithm for the machine learning powered nanosensor ar...2 versions - Latest release: over 1 year ago - 18 downloads last month - 0 stars on GitHub - 1 maintainer
lifefit 1.0.4
Reconvolution fitting of TCSPC histograms4 versions - Latest release: over 3 years ago - 1 dependent repositories - 42 downloads last month - 5 stars on GitHub - 1 maintainer
Top 9.6% on pypi.org
28 versions - Latest release: over 4 years ago - 3 dependent repositories - 156 downloads last month - 41 stars on GitHub - 2 maintainers
pycorrfit 1.1.7 💰
Scientific tool for fitting correlation curves on a logarithmic plot.28 versions - Latest release: over 4 years ago - 3 dependent repositories - 156 downloads last month - 41 stars on GitHub - 2 maintainers
labellib 2020.10.5
Python bindings for LabelLib10 versions - Latest release: over 3 years ago - 1 dependent repositories - 73 downloads last month - 8 stars on GitHub - 2 maintainers
popmodel 0.4.0
Model molecular excited state populations over time7 versions - Latest release: about 8 years ago - 2 dependent repositories - 48 downloads last month - 0 stars on GitHub - 1 maintainer
fpbase 0.0.1rc0
Stub for future FPbase API1 version - Latest release: 6 months ago - 7 downloads last month - 62 stars on GitHub - 1 maintainer
tttrlib 0.24.3
Read, write & process time-tagged time-resolved (TTTR) data.5 versions - Latest release: 4 months ago - 160 downloads last month - 18 stars on GitHub - 1 maintainer
blitzcurve 0.0.2
Time-resolved fluorescence anisotropy analysis.1 version - Latest release: about 6 years ago - 1 dependent repositories - 20 downloads last month - 0 stars on GitHub - 1 maintainer
ifpd2 1.0.1a1
An iFISH probe design pipeline (II)2 versions - Latest release: over 2 years ago - 1 dependent repositories - 13 downloads last month - 2 stars on GitHub - 1 maintainer
Top 8.8% on pypi.org
20 versions - Latest release: about 3 years ago - 3 dependent repositories - 192 downloads last month - 162 stars on GitHub - 1 maintainer
cytoflow 1.1.1
Python tools for quantitative, reproducible flow cytometry analysis20 versions - Latest release: about 3 years ago - 3 dependent repositories - 192 downloads last month - 162 stars on GitHub - 1 maintainer
corrct 0.9.1
Physically corrected projectors for X-ray induced emission CT.14 versions - Latest release: 3 months ago - 1 dependent repositories - 52 downloads last month - 4 stars on GitHub - 1 maintainer
opticalmapping 0.2.2
A toolbox for analyzing optical mapping and fluorescence imaging data.8 versions - Latest release: about 1 month ago - 2.15 thousand downloads last month - 7 stars on GitHub - 2 maintainers
cytoself 0.0.0
An image feature extractor with self-supervised learning5 versions - Latest release: about 3 years ago - 31 downloads last month - 69 stars on GitHub - 2 maintainers
xmimsim 0.1.3
Toolkit for making and processing X-ray fluoresence simulations via XMI-MSIM6 versions - Latest release: almost 5 years ago - 1 dependent repositories - 38 downloads last month - 1 stars on GitHub - 1 maintainer
nellie 0.1.8
Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cel...9 versions - Latest release: about 1 month ago - 153 downloads last month - 26 stars on GitHub - 1 maintainer
avtraj 0.0.8
A library to calculate FRET observables for MD trajectories by accessible volume (AV) simulations...2 versions - Latest release: over 5 years ago - 1 dependent repositories - 22 downloads last month - 1 stars on GitHub - 1 maintainer
pyfluo 1.0
A python library for Ca imaging data analysis.2 versions - Latest release: 10 months ago - 2 dependent repositories - 2 stars on GitHub - 1 maintainer
locan 0.19.1
Analysis software for single-molecule localization microscopy14 versions - Latest release: 3 months ago - 1 dependent package - 1 dependent repositories - 149 downloads last month - 20 stars on GitHub - 1 maintainer
multiel-spectra 0.0.28
Multi-Element Fluorescence Xray Spectra Generator16 versions - Latest release: 11 months ago - 141 downloads last month - 1 maintainer
optical-flow-registration-bioinfotongli 1.0.0 removed
Optical-flow-based image registration for fluorescence microscopy images1 version - Latest release: about 2 years ago - 1 dependent repositories - 7 downloads last month - 3 stars on GitHub - 1 maintainer
feature-based-registration-bioinfotongli 2.0.1 removed
Feature-spot-based image registration for fluorescence microscopy images2 versions - Latest release: about 2 years ago - 1 dependent repositories - 7 downloads last month - 3 stars on GitHub - 1 maintainer
sparsedeconv-bioinfotongli 0.0.1 removed
A wrapper of sparse deconvolution1 version - Latest release: almost 2 years ago - 1 maintainer
agons 1.1.9 removed
Package to use Yigit Lab developed AGONS algorithm for the machine learning powered nanosensor ar...16 versions - Latest release: over 1 year ago - 0 stars on GitHub - 1 maintainer
Related Keywords
python
11
microscopy
9
spectroscopy
7
biology
5
DNA
5
FISH
5
hybridization
5
oligonucleotide
5
cell
4
RNA
4
imaging
4
ifish-probe
4
hacktoberfest
4
fish
4
dna
4
fluorescence-microscopy-imaging
3
microscope
3
gui
3
simulation
2
single-molecule
2
fret
2
xray
2
design
2
ifish
2
probe
2
web-interface
2
nanosensors
2
automation
2
accessible-volumes
2
anisotropy
2
correlation
2
protein
2
analysis
2
registration
2
DAPI
2
slide-imaging
2
fluorescence-correlation
2
probe-design
2
fish-probe
2
image-processing
2
biophysics
2
flow-cytometry-analysis
1
data-driven
1
self-supervised
1
pytorch
1
self-supervised-learning
1
scipy
1
gate
1
opencell
1
jupyter
1
xrf-ct
1
corrct
1
workflow
1
scientific-computing
1
xrd-ct
1
notebooks
1
self-attenuation
1
attenuation correction
1
diffraction
1
tomography
1
cardiac-cells
1
cardiac-dynamics
1
cardiac-motion
1
video-processing
1
autoencoder
1
deep-learning
1
mixture-modeling
1
selection
1
feature
1
deconvolution
1
package
1
pypi
1
paint
1
palm
1
dstorm
1
storm
1
smlm
1
single-molecule localization microscopy
1
super-resolution
1
ca
1
calcium
1
pyfluo
1
md-trajectory
1
fps
1
avs
1
tracking
1
segmentation
1
organelles
1
machine-learning
1
image-analysis
1
x-ray
1
xrf
1
msim
1
xmi
1
xmimsim
1
tensorflow
1
cytometry
1
pde
1
frap-experiment
1
frap-analysis
1