Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
repo1.maven.org "genomics" keyword
edu.berkeley.cs.amplab.adam:adam-cli 0.7.2
A fast, scalable genome analysis system2 versions - Latest release: about 10 years ago - 1 dependent repositories - 944 stars on GitHub
org.bdgenomics.adam:adam-format 0.12.0
A fast, scalable genome analysis system5 versions - Latest release: almost 10 years ago - 1 dependent package - 2 dependent repositories - 948 stars on GitHub
org.monarchinitiative.phenol:phenol-annotations 2.1.1
phenol-annotation contains the annotation functionality for ontologies21 versions - Latest release: about 2 months ago - 1 dependent package - 12 dependent repositories - 19 stars on GitHub
org.genomicsdb:genomicsdb 1.5.3
Java API for GenomicsDB38 versions - Latest release: about 2 months ago - 2 dependent packages - 1 dependent repositories - 77 stars on GitHub
com.jnpersson:discount_2.13 3.0.1
Analysis and counting of genomic k-mers for Apache Spark.4 versions - Latest release: over 1 year ago - 13 stars on GitHub
org.intermine:bio-source-reactome 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
com.jnpersson:discount_2.12 3.0.1
Analysis and counting of genomic k-mers for Apache Spark.6 versions - Latest release: over 1 year ago - 13 stars on GitHub
org.intermine:bio-source-update-data-sources 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:intermine-integrate 5.1.0
InterMine core modules10 versions - Latest release: almost 2 years ago - 63 dependent packages - 241 stars on GitHub
org.intermine:bio-source-hgnc 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-core 5.1.0
InterMine bio modules10 versions - Latest release: almost 2 years ago - 62 dependent packages - 241 stars on GitHub
org.intermine:bio-postprocess-populate-child-features 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:intermine-pathquery 5.1.0
InterMine core modules10 versions - Latest release: almost 2 years ago - 2 dependent packages - 241 stars on GitHub
org.intermine:bio-postprocess-create-chromosome-locations-and-lengths 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-ensembl-compara 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:intermine-api 5.1.0
InterMine core modules10 versions - Latest release: almost 2 years ago - 5 dependent packages - 241 stars on GitHub
org.intermine:intermine-model 5.1.0
InterMine core modules10 versions - Latest release: almost 2 years ago - 4 dependent packages - 241 stars on GitHub
org.intermine:bio-source-ncbi-gene 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-kegg-orthologues 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-interpro-go 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-treefam 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-interpro 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-so 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-rgd-identifiers 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-attribute-indexes 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-update-publications 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-uniprot-keywords 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-psi-complexes 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-uniprot 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-gene-flanking-features 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-intermine-items-xml-file 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-go-annotation 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:intermine-webapp 5.1.0
InterMine core modules10 versions - Latest release: almost 2 years ago - 4 dependent packages - 241 stars on GitHub
org.intermine:bio-model 5.1.0
InterMine bio modules10 versions - Latest release: almost 2 years ago - 50 dependent packages - 241 stars on GitHub
org.intermine:bio-postprocess-create-location-overlap-index 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-mammalian-phenotype-ontology 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-testresources 5.1.0
InterMine bio modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-utr-references 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-psi-mi-ontology 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-chado-db 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-homologene 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-orthodb 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-panther 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:plugin 5.1.0
InterMine Plugin10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-references 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-isa 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-fasta 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-psi 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-intermine-items-large-xml-file 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-obo 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-R2RML-mapping 5.1.0
InterMine Post Processes modules1 version - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-tools 5.1.0
InterMine bio modules10 versions - Latest release: almost 2 years ago - 1 dependent package - 241 stars on GitHub
org.intermine:bio-source-go 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-pubmed-gene 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:intermine-jbrowse-endpoint 5.1.0
InterMine core modules10 versions - Latest release: almost 2 years ago - 1 dependent package - 241 stars on GitHub
org.intermine:bio-source-mgi-identifiers 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-do 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-postprocess-summarise-objectstore 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:intermine-testresources 5.1.0
InterMine core modules10 versions - Latest release: almost 2 years ago - 5 dependent packages - 241 stars on GitHub
org.intermine:intermine-webtasks 5.1.0
InterMine core modules10 versions - Latest release: almost 2 years ago - 5 dependent packages - 241 stars on GitHub
org.intermine:bio-source-gff 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-intergenic-region-features 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-biogrid 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-eco 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-protein2ipr 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:intermine-resources 5.1.0
InterMine core modules10 versions - Latest release: almost 2 years ago - 70 dependent packages - 241 stars on GitHub
org.intermine:bio-postprocess-create-intron-features 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-malaria-gff 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-entrez-organism 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-postprocess-make-spanning-locations 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-overlap-view 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-omim 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-kegg-pathway 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-vcf 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-delimited 5.1.0
InterMine bio sources modules3 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-search-index 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-postprocess-transfer-sequences 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-wormbase-identifiers 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:intermine-objectstore 5.1.0
InterMine core modules10 versions - Latest release: almost 2 years ago - 9 dependent packages - 241 stars on GitHub
org.intermine:bio-webapp 5.1.0
InterMine bio modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-source-ncbi-gff 5.1.0
InterMine bio sources modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-autocomplete-index 5.1.0
InterMine Post Processes modules10 versions - Latest release: almost 2 years ago - 241 stars on GitHub
org.monarchinitiative.phenol:phenol-cli 2.1.1
phenol-cli gives command line access to phenol26 versions - Latest release: about 2 months ago - 1 dependent repositories - 19 stars on GitHub
org.monarchinitiative.phenol:phenol-analysis 2.1.1
phenol-analysis implements some algorithms for working with ontology data26 versions - Latest release: about 2 months ago - 1 dependent package - 3 dependent repositories - 19 stars on GitHub
org.monarchinitiative.phenol:phenol 2.1.1
Phenotype Ontology Library26 versions - Latest release: about 2 months ago - 19 stars on GitHub
Related Keywords
bioinformatics
167
java
157
python
132
lgplv3
76
open-source
76
opensource
76
perl
76
genetics
76
data-warehouse
76
data-visualization
76
data-visualisation
76
clojurescript
76
clojure
76
webservices
76
tomcat8
76
tomcat
76
postgresql
76
api
76
biology
76
scala
72
spark
67
big-data
55
parquet
55
r
55
avro
55
structure-alignment
16
structural-bioinformatics
16
sequence-alignment
16
protein-structure
16
protein-sequences
16
protein-modification
16
protein-data-bank
16
pdb
16
parser-library
16
bigdata
11
architecture
10
cross-engine-execution
10
data-analysis
10
data-management-engine
10
dataset
10
engine
10
engine-configurations
10
gdm
10
gdm-dataset-architecture
10
genometric-query-language
10
genomic-tertiary-analysis
10
gmql-script
10
ngs
9
machine-learning
7
phenotypes
6
phenomics
6
ontologies
6
monarchinitiative
6
mammalian-phenotype-ontology
6
human-phenotype-ontology
6
sequencing
5
dna
5
delta
5
gwas
5
population-genetics
5
regression
5
vcf
4
analyzing-genomic-data
3
fgbio
3
molecular-indexes
3
umi
3
bam
3
sam
3
java-api
3
fasta
3
cram
3
search-engine
2
spelling-correction
2
universal-automata
2
kmer-counting
2
kmer-frequency-count
2
kmers
2
gatk
2
genome
2
science
2
approximate-string-matching
2
computational-biology
2
computer-science
2
data-science
2
dictionary
2
distance-metric
2
edit-distance
2
natural-language-processing
2
levenshtein-distance
2
levenshtein-automata
2
information-retrieval
2
fuzzy-search
2
finite-state-transducer
2
finite-state-automata
2
vcf-files
1
variants
1
spark-sql
1
team-clinical-intelligence
1
lifeomic
1
coordinate
1