compcodeR
@
1.40.0
RNAseq data simulation, differential expression analysis and performance comparison of differential expression methods
Published
Indexed
Dependencies
47
47
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Readme
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Dependencies
-
R
>= 4.0depends -
sm
*depends -
DSS
*enhances -
rpanel
*enhances -
imports
-
MASS
*imports -
ROCR
*imports -
ape
*imports -
caTools
*imports -
edgeR
*imports -
ggplot2
*imports -
gplots
*imports -
imports
-
graphics
*imports -
grid
*imports -
gtools
*imports -
knitr
>= 1.2imports -
lattice
>= 0.16imports -
limma
*imports -
markdown
*imports -
imports
-
methods
*imports -
modeest
*imports -
phylolm
*imports -
imports
-
shiny
*imports -
imports
-
stats
*imports -
stringr
*imports -
utils
*imports -
vioplot
*imports -
suggests
-
DESeq2
>= 1.1.31suggests -
EBSeq
*suggests -
NBPSeq
>= 0.3.0suggests -
NOISeq
*suggests -
TCC
*suggests -
covr
*suggests -
suggests
-
ggtree
*suggests -
phangorn
*suggests -
phytools
*suggests -
statmod
*suggests -
sva
*suggests -
tcltk
*suggests -
testthat
*suggests -
tidytree
*suggests
Links
| Registry | bioconductor.org |
| Docs | Documentation |
| Download | Download |
| JSON API | View JSON |
| CodeMeta | codemeta.json |
Version Details
| PURL |
pkg:bioconductor/compcodeR@1.40.0
spec |