Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
bioconductor.org packages
Loading...
peakPantheR 1.16.1
Peak Picking and Annotation of High Resolution Experiments4 versions - Latest release: 3 months ago - 5.72 thousand downloads total - 12 stars on GitHub - 1 maintainer
switchde 1.28.0
Switch-like differential expression across single-cell trajectories3 versions - Latest release: 6 months ago - 10.6 thousand downloads total - 19 stars on GitHub - 1 maintainer
DifferentialRegulation 2.0.3
Differentially regulated genes from scRNA-seq data6 versions - Latest release: 3 months ago - 2.37 thousand downloads total - 8 stars on GitHub - 1 maintainer
Top 1.9% on bioconductor.org
4 versions - Latest release: 23 days ago - 30 dependent packages - 397 thousand downloads total - 120 stars on GitHub - 1 maintainer
MSnbase 2.30.1
Base Functions and Classes for Mass Spectrometry and Proteomics4 versions - Latest release: 23 days ago - 30 dependent packages - 397 thousand downloads total - 120 stars on GitHub - 1 maintainer
SCnorm 1.24.0
Normalization of single cell RNA-seq data3 versions - Latest release: 6 months ago - 17.4 thousand downloads total - 45 stars on GitHub - 1 maintainer
ExperimentHubData 1.28.0
Add resources to ExperimentHub3 versions - Latest release: 6 months ago - 3 dependent packages - 27.5 thousand downloads total - 1 maintainer
TPP2D 1.18.0
Detection of ligand-protein interactions from 2D thermal profiles (DLPTP)3 versions - Latest release: 6 months ago - 5.21 thousand downloads total - 1 maintainer
Top 0.2% on bioconductor.org
10 versions - Latest release: 21 days ago - 342 dependent packages - 7.22 million downloads total - 1 maintainer
GenomeInfoDb 1.40.0
Utilities for manipulating chromosome names, including modifying them to follow a particular nami...10 versions - Latest release: 21 days ago - 342 dependent packages - 7.22 million downloads total - 1 maintainer
ReUseData 1.2.2
Reusable and reproducible Data Management5 versions - Latest release: 5 months ago - 1.11 thousand downloads total - 3 stars on GitHub - 1 maintainer
Top 1.4% on bioconductor.org
3 versions - Latest release: 21 days ago - 47 dependent packages - 1.87 million downloads total - 82 stars on GitHub - 1 maintainer
GEOquery 2.72.0
Get data from NCBI Gene Expression Omnibus (GEO)3 versions - Latest release: 21 days ago - 47 dependent packages - 1.87 million downloads total - 82 stars on GitHub - 1 maintainer
Top 0.4% on bioconductor.org
3 versions - Latest release: 21 days ago - 212 dependent packages - 3.91 million downloads total - 1 maintainer
Rsamtools 2.20.0
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import3 versions - Latest release: 21 days ago - 212 dependent packages - 3.91 million downloads total - 1 maintainer
Top 1.9% on bioconductor.org
3 versions - Latest release: 21 days ago - 15 dependent packages - 1.18 million downloads total - 1 maintainer
enrichplot 1.24.0
Visualization of Functional Enrichment Result3 versions - Latest release: 21 days ago - 15 dependent packages - 1.18 million downloads total - 1 maintainer
Top 1.5% on bioconductor.org
4 versions - Latest release: 21 days ago - 96 dependent packages - 622 thousand downloads total - 1 maintainer
scater 1.32.0
Single-Cell Analysis Toolkit for Gene Expression Data in R4 versions - Latest release: 21 days ago - 96 dependent packages - 622 thousand downloads total - 1 maintainer
Top 0.2% on bioconductor.org
6 versions - Latest release: 21 days ago - 333 dependent packages - 6.29 million downloads total - 1 maintainer
Biostrings 2.72.0
Efficient manipulation of biological strings6 versions - Latest release: 21 days ago - 333 dependent packages - 6.29 million downloads total - 1 maintainer
Top 0.2% on bioconductor.org
3 versions - Latest release: 21 days ago - 632 dependent packages - 4.97 million downloads total - 1 maintainer
SummarizedExperiment 1.34.0
SummarizedExperiment container3 versions - Latest release: 21 days ago - 632 dependent packages - 4.97 million downloads total - 1 maintainer
Top 0.5% on bioconductor.org
6 versions - Latest release: 21 days ago - 183 dependent packages - 3.32 million downloads total - 1 maintainer
GenomicFeatures 1.56.0
Conveniently import and query gene models6 versions - Latest release: 21 days ago - 183 dependent packages - 3.32 million downloads total - 1 maintainer
BioCor 1.26.0
Functional similarities3 versions - Latest release: 6 months ago - 11.8 thousand downloads total - 14 stars on GitHub - 1 maintainer
Top 0.8% on bioconductor.org
5 versions - Latest release: 21 days ago - 51 dependent packages - 4.77 million downloads total - 1 maintainer
flowCore 2.16.0
flowCore: Basic structures for flow cytometry data5 versions - Latest release: 21 days ago - 51 dependent packages - 4.77 million downloads total - 1 maintainer
Top 1.5% on bioconductor.org
6 versions - Latest release: 10 days ago - 15 dependent packages - 853 thousand downloads total - 157 stars on GitHub - 1 maintainer
xcms 4.2.1
LC-MS and GC-MS Data Analysis6 versions - Latest release: 10 days ago - 15 dependent packages - 853 thousand downloads total - 157 stars on GitHub - 1 maintainer
Top 1.4% on bioconductor.org
3 versions - Latest release: 21 days ago - 45 dependent packages - 1.54 million downloads total - 106 stars on GitHub - 2 maintainers
qvalue 2.36.0
Q-value estimation for false discovery rate control3 versions - Latest release: 21 days ago - 45 dependent packages - 1.54 million downloads total - 106 stars on GitHub - 2 maintainers
Top 0.1% on bioconductor.org
5 versions - Latest release: 21 days ago - 740 dependent packages - 7.45 million downloads total - 1 maintainer
S4Vectors 0.42.0
Foundation of vector-like and list-like containers in Bioconductor5 versions - Latest release: 21 days ago - 740 dependent packages - 7.45 million downloads total - 1 maintainer
Top 1.6% on bioconductor.org
6 versions - Latest release: 21 days ago - 27 dependent packages - 1.24 million downloads total - 1 maintainer
DOSE 3.30.0
Disease Ontology Semantic and Enrichment analysis6 versions - Latest release: 21 days ago - 27 dependent packages - 1.24 million downloads total - 1 maintainer
Top 1.4% on bioconductor.org
3 versions - Latest release: 21 days ago - 33 dependent packages - 1.48 million downloads total - 1 maintainer
RBGL 1.80.0
An interface to the BOOST graph library3 versions - Latest release: 21 days ago - 33 dependent packages - 1.48 million downloads total - 1 maintainer
Top 1.2% on bioconductor.org
4 versions - Latest release: 21 days ago - 59 dependent packages - 1.4 million downloads total - 1 maintainer
clusterProfiler 4.12.0
A universal enrichment tool for interpreting omics data4 versions - Latest release: 21 days ago - 59 dependent packages - 1.4 million downloads total - 1 maintainer
Top 0.9% on bioconductor.org
4 versions - Latest release: 21 days ago - 29 dependent packages - 6.47 million downloads total - 1 maintainer
zlibbioc 1.50.0
An R packaged zlib-1.2.54 versions - Latest release: 21 days ago - 29 dependent packages - 6.47 million downloads total - 1 maintainer
Top 0.1% on bioconductor.org
4 versions - Latest release: 21 days ago - 604 dependent packages - 6.34 million downloads total - 1 maintainer
GenomicRanges 1.56.0
Representation and manipulation of genomic intervals4 versions - Latest release: 21 days ago - 604 dependent packages - 6.34 million downloads total - 1 maintainer
Top 1.7% on bioconductor.org
4 versions - Latest release: 21 days ago - 28 dependent packages - 1.15 million downloads total - 1 maintainer
ggtree 3.12.0
an R package for visualization of tree and annotation data4 versions - Latest release: 21 days ago - 28 dependent packages - 1.15 million downloads total - 1 maintainer
Top 1.0% on bioconductor.org
3 versions - Latest release: 21 days ago - 45 dependent packages - 2.99 million downloads total - 1 maintainer
MatrixGenerics 1.16.0
S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects3 versions - Latest release: 21 days ago - 45 dependent packages - 2.99 million downloads total - 1 maintainer
Top 1.7% on bioconductor.org
3 versions - Latest release: 21 days ago - 30 dependent packages - 894 thousand downloads total - 1 maintainer
vsn 3.72.0
Variance stabilization and calibration for microarray data3 versions - Latest release: 21 days ago - 30 dependent packages - 894 thousand downloads total - 1 maintainer
Top 0.6% on bioconductor.org
14 versions - Latest release: 21 days ago - 181 dependent packages - 3.02 million downloads total - 4 maintainers
edgeR 4.2.0
Empirical Analysis of Digital Gene Expression Data in R14 versions - Latest release: 21 days ago - 181 dependent packages - 3.02 million downloads total - 4 maintainers
Top 0.3% on bioconductor.org
5 versions - Latest release: 21 days ago - 322 dependent packages - 5.09 million downloads total - 1 maintainer
limma 3.60.0
Linear Models for Microarray Data5 versions - Latest release: 21 days ago - 322 dependent packages - 5.09 million downloads total - 1 maintainer
Top 0.1% on bioconductor.org
3 versions - Latest release: 21 days ago - 563 dependent packages - 8.04 million downloads total - 1 maintainer
IRanges 2.38.0
Foundation of integer range manipulation in Bioconductor3 versions - Latest release: 21 days ago - 563 dependent packages - 8.04 million downloads total - 1 maintainer
Top 1.4% on bioconductor.org
4 versions - Latest release: 21 days ago - 54 dependent packages - 990 thousand downloads total - 1 maintainer
HDF5Array 1.32.0
HDF5 backend for DelayedArray objects4 versions - Latest release: 21 days ago - 54 dependent packages - 990 thousand downloads total - 1 maintainer
Top 0.5% on bioconductor.org
4 versions - Latest release: 10 days ago - 111 dependent packages - 5 million downloads total - 1 maintainer
DelayedArray 0.30.1
A unified framework for working transparently with on-disk and in-memory array-like datasets4 versions - Latest release: 10 days ago - 111 dependent packages - 5 million downloads total - 1 maintainer
Top 1.2% on bioconductor.org
3 versions - Latest release: 21 days ago - 35 dependent packages - 2.41 million downloads total - 1 maintainer
KEGGREST 1.44.0
Client-side REST access to the Kyoto Encyclopedia of Genes and Genomes (KEGG)3 versions - Latest release: 21 days ago - 35 dependent packages - 2.41 million downloads total - 1 maintainer
Top 1.3% on bioconductor.org
3 versions - Latest release: 21 days ago - 36 dependent packages - 1.63 million downloads total - 1 maintainer
ShortRead 1.62.0
FASTQ input and manipulation3 versions - Latest release: 21 days ago - 36 dependent packages - 1.63 million downloads total - 1 maintainer
Top 0.6% on bioconductor.org
5 versions - Latest release: 21 days ago - 132 dependent packages - 3.57 million downloads total - 1 maintainer
GenomicAlignments 1.40.0
Representation and manipulation of short genomic alignments5 versions - Latest release: 21 days ago - 132 dependent packages - 3.57 million downloads total - 1 maintainer
Top 0.8% on bioconductor.org
5 versions - Latest release: 21 days ago - 129 dependent packages - 2 million downloads total - 1 maintainer
BSgenome 1.72.0
Software infrastructure for efficient representation of full genomes and their SNPs5 versions - Latest release: 21 days ago - 129 dependent packages - 2 million downloads total - 1 maintainer
Top 0.9% on bioconductor.org
3 versions - Latest release: 21 days ago - 36 dependent packages - 6.03 million downloads total - 1 maintainer
XVector 0.44.0
Foundation of external vector representation and manipulation in Bioconductor3 versions - Latest release: 21 days ago - 36 dependent packages - 6.03 million downloads total - 1 maintainer
Top 1.0% on bioconductor.org
3 versions - Latest release: 21 days ago - 61 dependent packages - 1.52 million downloads total - 1 maintainer
Rgraphviz 2.48.0
Provides plotting capabilities for R graph objects3 versions - Latest release: 21 days ago - 61 dependent packages - 1.52 million downloads total - 1 maintainer
Top 1.0% on bioconductor.org
3 versions - Latest release: 21 days ago - 201 dependent packages - 1.07 million downloads total - 1 maintainer
SingleCellExperiment 1.26.0
S4 Classes for Single Cell Data3 versions - Latest release: 21 days ago - 201 dependent packages - 1.07 million downloads total - 1 maintainer
Top 0.4% on bioconductor.org
3 versions - Latest release: 21 days ago - 251 dependent packages - 3.87 million downloads total - 1 maintainer
rtracklayer 1.64.0
R interface to genome annotation files and the UCSC genome browser3 versions - Latest release: 21 days ago - 251 dependent packages - 3.87 million downloads total - 1 maintainer
Top 1.2% on bioconductor.org
3 versions - Latest release: 21 days ago - 37 dependent packages - 2.02 million downloads total - 1 maintainer
multtest 2.60.0
Resampling-based multiple hypothesis testing3 versions - Latest release: 21 days ago - 37 dependent packages - 2.02 million downloads total - 1 maintainer
Top 1.3% on bioconductor.org
3 versions - Latest release: 21 days ago - 44 dependent packages - 1.48 million downloads total - 1 maintainer
impute 1.78.0
impute: Imputation for microarray data3 versions - Latest release: 21 days ago - 44 dependent packages - 1.48 million downloads total - 1 maintainer
Top 0.1% on bioconductor.org
3 versions - Latest release: 21 days ago - 518 dependent packages - 7.92 million downloads total - 1 maintainer
Biobase 2.64.0
Biobase: Base functions for Bioconductor3 versions - Latest release: 21 days ago - 518 dependent packages - 7.92 million downloads total - 1 maintainer
Top 1.4% on bioconductor.org
3 versions - Latest release: 21 days ago - 49 dependent packages - 980 thousand downloads total - 1 maintainer
GSEABase 1.66.0
Gene set enrichment data structures and methods3 versions - Latest release: 21 days ago - 49 dependent packages - 980 thousand downloads total - 1 maintainer
Top 0.7% on bioconductor.org
3 versions - Latest release: 21 days ago - 66 dependent packages - 3.31 million downloads total - 1 maintainer
genefilter 1.86.0
genefilter: methods for filtering genes from high-throughput experiments3 versions - Latest release: 21 days ago - 66 dependent packages - 3.31 million downloads total - 1 maintainer
Top 0.7% on bioconductor.org
3 versions - Latest release: 21 days ago - 101 dependent packages - 2.57 million downloads total - 1 maintainer
graph 1.82.0
graph: A package to handle graph data structures3 versions - Latest release: 21 days ago - 101 dependent packages - 2.57 million downloads total - 1 maintainer
Top 0.9% on bioconductor.org
4 versions - Latest release: 21 days ago - 93 dependent packages - 1.55 million downloads total - 1 maintainer
VariantAnnotation 1.50.0
Annotation of Genetic Variants4 versions - Latest release: 21 days ago - 93 dependent packages - 1.55 million downloads total - 1 maintainer
Top 1.7% on bioconductor.org
3 versions - Latest release: 21 days ago - 43 dependent packages - 805 thousand downloads total - 3 maintainers
sva 3.52.0
Surrogate Variable Analysis3 versions - Latest release: 21 days ago - 43 dependent packages - 805 thousand downloads total - 3 maintainers
standR 1.6.0
Spatial transcriptome analyses of Nanostring's DSP data in R3 versions - Latest release: 6 months ago - 3.38 thousand downloads total - 15 stars on GitHub - 1 maintainer
Top 4.7% on bioconductor.org
4 versions - Latest release: 6 months ago - 80.3 thousand downloads total - 502 stars on GitHub - 1 maintainer
infercnv 1.18.1
Infer Copy Number Variation from Single-Cell RNA-Seq Data4 versions - Latest release: 6 months ago - 80.3 thousand downloads total - 502 stars on GitHub - 1 maintainer
GeneGeneInteR 1.28.0
Tools for Testing Gene-Gene Interaction at the Gene Level3 versions - Latest release: 6 months ago - 10.7 thousand downloads total - 1 maintainer
Top 1.7% on bioconductor.org
4 versions - Latest release: 21 days ago - 69 dependent packages - 2.09 million downloads total - 59 stars on GitHub - 1 maintainer
rhdf5 2.48.0
R Interface to HDF54 versions - Latest release: 21 days ago - 69 dependent packages - 2.09 million downloads total - 59 stars on GitHub - 1 maintainer
Top 2.3% on bioconductor.org
3 versions - Latest release: 6 months ago - 13 dependent packages - 360 thousand downloads total - 130 stars on GitHub - 1 maintainer
tximport 1.30.0
Import and summarize transcript-level estimates for transcript- and gene-level analysis3 versions - Latest release: 6 months ago - 13 dependent packages - 360 thousand downloads total - 130 stars on GitHub - 1 maintainer
RNAinteract 1.50.0
Estimate Pairwise Interactions from multidimensional features3 versions - Latest release: 6 months ago - 23.7 thousand downloads total - 1 maintainer
Top 0.3% on bioconductor.org
3 versions - Latest release: 21 days ago - 255 dependent packages - 6.03 million downloads total - 1 maintainer
AnnotationDbi 1.66.0
Manipulation of SQLite-based annotations in Bioconductor3 versions - Latest release: 21 days ago - 255 dependent packages - 6.03 million downloads total - 1 maintainer
Top 0.9% on bioconductor.org
3 versions - Latest release: 21 days ago - 74 dependent packages - 1.86 million downloads total - 1 maintainer
affy 1.82.0
Methods for Affymetrix Oligonucleotide Arrays3 versions - Latest release: 21 days ago - 74 dependent packages - 1.86 million downloads total - 1 maintainer
Top 0.9% on bioconductor.org
3 versions - Latest release: 21 days ago - 48 dependent packages - 3.61 million downloads total - 1 maintainer
annotate 1.82.0
Annotation for microarrays3 versions - Latest release: 21 days ago - 48 dependent packages - 3.61 million downloads total - 1 maintainer
Top 0.1% on bioconductor.org
3 versions - Latest release: 21 days ago - 729 dependent packages - 8.2 million downloads total - 1 maintainer
BiocGenerics 0.50.0
S4 generic functions used in Bioconductor3 versions - Latest release: 21 days ago - 729 dependent packages - 8.2 million downloads total - 1 maintainer
metabolomicsWorkbenchR 1.12.0
Metabolomics Workbench in R3 versions - Latest release: 6 months ago - 1 dependent package - 4.37 thousand downloads total - 1 maintainer
diggit 1.34.0
Inference of Genetic Variants Driving Cellular Phenotypes3 versions - Latest release: 6 months ago - 13.4 thousand downloads total - 1 maintainer
InteractiveComplexHeatmap 1.10.0
Make Interactive Complex Heatmaps3 versions - Latest release: 6 months ago - 4 dependent packages - 15.6 thousand downloads total - 112 stars on GitHub - 1 maintainer
ToxicoGx 2.6.0
Analysis of Large-Scale Toxico-Genomic Data3 versions - Latest release: 6 months ago - 4.15 thousand downloads total - 1 maintainer
MDTS 1.22.0
Detection of de novo deletion in targeted sequencing trios3 versions - Latest release: 6 months ago - 7.04 thousand downloads total - 1 maintainer
iSeq 1.54.0
Bayesian Hierarchical Modeling of ChIP-seq Data Through Hidden Ising Models3 versions - Latest release: 6 months ago - 24.1 thousand downloads total - 1 maintainer
clustifyr 1.14.0
Classifier for Single-cell RNA-seq Using Cell Clusters3 versions - Latest release: 7 months ago - 9.06 thousand downloads total - 101 stars on GitHub - 1 maintainer
DESpace 1.2.1
DESpace: a framework to discover spatially variable genes4 versions - Latest release: 3 months ago - 1.47 thousand downloads total - 3 stars on GitHub - 1 maintainer
categoryCompare 1.46.0
Meta-analysis of high-throughput experiments using feature annotations3 versions - Latest release: 6 months ago - 23.7 thousand downloads total - 5 stars on GitHub - 1 maintainer
covEB 1.28.0
Empirical Bayes estimate of block diagonal covariance matrices3 versions - Latest release: 6 months ago - 9.93 thousand downloads total - 1 maintainer
plyinteractions 1.0.0
Extending tidy verbs to genomic interactions3 versions - Latest release: 6 months ago - 1.03 thousand downloads total - 0 stars on GitHub - 1 maintainer
UMI4Cats 1.12.0
UMI4Cats: Processing, analysis and visualization of UMI-4C chromatin contact data3 versions - Latest release: 6 months ago - 3.93 thousand downloads total - 4 stars on GitHub - 1 maintainer
Top 7.0% on bioconductor.org
3 versions - Latest release: 6 months ago - 32.8 thousand downloads total - 1 maintainer
SpeCond 1.56.0
Condition specific detection from expression data3 versions - Latest release: 6 months ago - 32.8 thousand downloads total - 1 maintainer
MsQuality 1.2.1
MsQuality - Quality metric calculation from Spectra and MsExperiment objects4 versions - Latest release: 2 months ago - 1.6 thousand downloads total - 7 stars on GitHub - 1 maintainer
Top 6.5% on bioconductor.org
3 versions - Latest release: 6 months ago - 2 dependent packages - 39.5 thousand downloads total - 1 maintainer
PADOG 1.44.0
Pathway Analysis with Down-weighting of Overlapping Genes (PADOG)3 versions - Latest release: 6 months ago - 2 dependent packages - 39.5 thousand downloads total - 1 maintainer
CircSeqAlignTk 1.4.0
A toolkit for end-to-end analysis of RNA-seq data for circular genomes3 versions - Latest release: 6 months ago - 1.58 thousand downloads total - 0 stars on GitHub - 1 maintainer
twilight 1.78.0
Estimation of local false discovery rate3 versions - Latest release: 6 months ago - 1 dependent package - 45 thousand downloads total - 1 maintainer
LineagePulse 1.21.0 removed
Differential expression analysis and model fitting for single-cell RNA-seq data2 versions - Latest release: 6 months ago - 7.08 thousand downloads total - 11 stars on GitHub - 1 maintainer
Top 9.9% on bioconductor.org
3 versions - Latest release: 6 months ago - 26.3 thousand downloads total - 1 maintainer
mBPCR 1.56.0
Bayesian Piecewise Constant Regression for DNA copy number estimation3 versions - Latest release: 6 months ago - 26.3 thousand downloads total - 1 maintainer
autonomics 1.12.0
Unified statistal Modeling of Omics Data4 versions - Latest release: 17 days ago - 3.18 thousand downloads total - 3 stars on GitHub - 1 maintainer
Top 7.7% on bioconductor.org
3 versions - Latest release: 6 months ago - 36.3 thousand downloads total - 2 maintainers
GDCRNATools 1.22.0
GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, mRNA, and miRNA data i...3 versions - Latest release: 6 months ago - 36.3 thousand downloads total - 2 maintainers
coseq 1.26.0
Co-Expression Analysis of Sequencing Data3 versions - Latest release: 6 months ago - 14.9 thousand downloads total - 1 maintainer
Top 6.7% on bioconductor.org
3 versions - Latest release: 22 days ago - 7 dependent packages - 49.1 thousand downloads total - 43 stars on GitHub - 1 maintainer
mia 1.12.0
Microbiome analysis3 versions - Latest release: 22 days ago - 7 dependent packages - 49.1 thousand downloads total - 43 stars on GitHub - 1 maintainer
Top 9.5% on bioconductor.org
3 versions - Latest release: 6 months ago - 27.2 thousand downloads total - 1 maintainer
nucleR 2.34.0
Nucleosome positioning package for R3 versions - Latest release: 6 months ago - 27.2 thousand downloads total - 1 maintainer
Top 3.8% on bioconductor.org
3 versions - Latest release: 6 months ago - 3 dependent packages - 92.5 thousand downloads total - 182 stars on GitHub - 2 maintainers
methylKit 1.28.0
DNA methylation analysis from high-throughput bisulfite sequencing results3 versions - Latest release: 6 months ago - 3 dependent packages - 92.5 thousand downloads total - 182 stars on GitHub - 2 maintainers
BufferedMatrix 1.66.0
A matrix data storage object held in temporary files3 versions - Latest release: 6 months ago - 1 dependent package - 33.4 thousand downloads total - 0 stars on GitHub - 1 maintainer
AnVILPublish 1.12.0
Publish Packages and Other Resources to AnVIL Workspaces3 versions - Latest release: 6 months ago - 3.94 thousand downloads total - 1 maintainer
aCGH 1.80.0
Classes and functions for Array Comparative Genomic Hybridization data3 versions - Latest release: 6 months ago - 5 dependent packages - 62.7 thousand downloads total - 1 maintainer
Cardinal 3.4.3
A mass spectrometry imaging toolbox for statistical analysis4 versions - Latest release: 5 months ago - 26.1 thousand downloads total - 1 maintainer
MetNet 1.20.0
Inferring metabolic networks from untargeted high-resolution mass spectrometry data3 versions - Latest release: 6 months ago - 6.9 thousand downloads total - 1 maintainer
MsBackendMgf 1.10.0
Mass Spectrometry Data Backend for Mascot Generic Format (mgf) Files3 versions - Latest release: 6 months ago - 3 dependent packages - 22 thousand downloads total - 4 stars on GitHub - 2 maintainers
CINdex 1.30.0
Chromosome Instability Index3 versions - Latest release: 6 months ago - 11.5 thousand downloads total - 1 maintainer
GBScleanR 1.8.0
Error correction tool for noisy genotyping by sequencing (GBS) data3 versions - Latest release: 21 days ago - 2.17 thousand downloads total - 0 stars on GitHub - 1 maintainer
infinityFlow 1.12.0
Augmenting Massively Parallel Cytometry Experiments Using Multivariate Non-Linear Regressions3 versions - Latest release: 6 months ago - 4.46 thousand downloads total - 1 maintainer
RGSEA 1.36.0
Random Gene Set Enrichment Analysis3 versions - Latest release: 6 months ago - 17.3 thousand downloads total - 1 maintainer
gemma.R 3.0.3
A wrapper for Gemma's Restful API to access curated gene expression data and differential express...6 versions - Latest release: 8 days ago - 2.01 thousand downloads total - 9 stars on GitHub - 1 maintainer
SwathXtend 2.24.0
SWATH extended library generation and statistical data analysis3 versions - Latest release: 6 months ago - 10.6 thousand downloads total - 1 maintainer
MGFR 1.28.0
Marker Gene Finder in RNA-seq data3 versions - Latest release: 6 months ago - 1 dependent package - 10.4 thousand downloads total - 1 maintainer
chihaya 1.2.0
Save Delayed Operations to a HDF5 File3 versions - Latest release: 6 months ago - 1 dependent package - 1.58 thousand downloads total - 0 stars on GitHub - 1 maintainer
maser 1.20.0
Mapping Alternative Splicing Events to pRoteins3 versions - Latest release: 6 months ago - 10.9 thousand downloads total - 16 stars on GitHub - 1 maintainer