Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
conda-forge.org "pdb" keyword
biopandas 0.4.1 💰
BioPandas is a library for working with Protein Databank Files(PDB) written in Python 2.7 and Pyt...11 versions - Latest release: almost 2 years ago - 3 dependent packages - 17 dependent repositories - 621 stars on GitHub
Top 9.1% on conda-forge.org
9 versions - Latest release: over 1 year ago - 28 dependent packages - 70 dependent repositories - 433 stars on GitHub
mdtraj 1.9.7
MDTraj is a python library that allows users to manipulate molecular dynamics (MD) trajectories a...9 versions - Latest release: over 1 year ago - 28 dependent packages - 70 dependent repositories - 433 stars on GitHub
plip 2.2.2
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interacti...10 versions - Latest release: almost 3 years ago - 1 dependent package - 1 dependent repositories - 283 stars on GitHub
pudb 2022.1.3
Full-screen console debugger for Python12 versions - Latest release: over 1 year ago - 1 dependent repositories - 2,615 stars on GitHub
rmsd 1.3.2
Calculate root-mean-square deviation (RMSD) between two sets of cartesian coordinates (XYZ or PDB...2 versions - Latest release: about 4 years ago - 1 dependent package - 4 dependent repositories - 370 stars on GitHub
pypdb 2.2
A Python API for the RCSB Protein Data Bank (PDB)6 versions - Latest release: almost 2 years ago - 1 dependent package - 2 dependent repositories - 237 stars on GitHub
Related Keywords
protein-structure
3
bioinformatics
2
molecule
2
pdb-files
2
rmsd
2
python
2
computational-biology
1
debugger
1
ipython
1
pytest
1
pytest-plugin
1
urwid
1
alignment
1
assignment
1
atoms
1
kabsch
1
reordering
1
structure
1
xyz
1
blast
1
protein-data-bank
1
protein-sequences
1
proteins
1
proteomics
1
drug-discovery
1
mol2
1
molecular-structures
1
molecules
1
pandas-dataframe
1
dihedral-angles
1
mdtraj
1
molecular-dynamics
1
molecular-dynamics-trajectories
1
docker
1
openbabel
1
plip
1
python-bindings
1
scientific-computing
1
singularity
1
bpython
1
debug
1