Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

hackage.haskell.org : BiobaseBlast

This library contains BLAST-related functionality: Parser for tabular NCBI BLAST+ output Parser for JSON2 NCBI BLAST+ output Parsers for BLOSUM and PAM matrices. Specialized substitution functions for (in)complete amino acid / nucleotide triplet substitution. Incomplete nucleotide patterns map one or two nucleotides to an amino acid (need for indel editing in the mitochondria of certain species like p.polycephalum). The matrices are currently not provided but can be found here: ftp://ftp.ncbi.nih.gov/blast/matrices/

Registry - Source - JSON
purl: pkg:hackage/BiobaseBlast
Keywords: bioinformatics, gpl, library
License: GPL-3.0-only
Latest release: almost 3 years ago
First release: over 10 years ago
Dependent repositories: 3
Downloads: 4,222 total
Stars: 3 on GitHub
Forks: 1 on GitHub
See more repository details: repos.ecosyste.ms
Last synced: 3 days ago

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