Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

hackage.haskell.org : MutationOrder

Determine the most likely order in which single nucleotide mutations happened between two RNA sequences. Developed to analyse the HAR 1 region, but agnostic to the actual sequences and can be used to analyze any RNA sequence that fits the algorithmic constraints. As long as the two input RNAs are small enough enough (couple hundred nucleotides) and the number of mutations is small enough (around 20-26, since the algorithm is exponential in this number) the algorithm should work for similar problems without changes. We currently only consider point mutations, not in-dels.

Registry - Source - JSON
purl: pkg:hackage/MutationOrder
Keywords: bioinformatics, gpl, library, program
License: GPL-3.0-only
Latest release: over 6 years ago
First release: about 7 years ago
Downloads: 2,462 total
Stars: 0 on GitHub
Forks: 0 on GitHub
See more repository details: repos.ecosyste.ms
Last synced: 22 days ago

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