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github.com/Euro-BioImaging/BatchConvert

A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, in a parallelised manner.

Ecosystem
proxy.golang.org
Latest Release
v0.0.4
about 2 years ago
Versions
5
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    Readme
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    Links
    Registry proxy.golang.org
    Source Repository
    Docs Documentation
    JSON API View JSON
    CodeMeta codemeta.json
    Package Details
    PURL pkg:golang/github.com/%21euro-%21bio%21imaging/%21batch%21convert
    spec
    License MIT
    First Release almost 3 years ago
    Last Synced 4 days ago
    Keywords
    bioimage conversion file-format image nextflow ome ome-tiff ome-zarr ome-zarr-converter workflow zarr
    Repository
    Stars 13 on GitHub
    Forks 2 on GitHub
    Commits 305
    Committers 3
    Avg per Author 101.667
    DDS 0.062
    commits.ecosyste.ms
    repos.ecosyste.ms
    Rankings on proxy.golang.org
    Overall Top 6.7%