Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "BioExcel" keyword
biobb-haddock
biobb_haddock is the Biobb module collection to compute information-driven flexible protein-prote...1 version - 0 stars on GitHub
biobb-3dshaper 0.1
Biobb_3DShaper is use case to run a simulation with 3DSHAPER and PyTorch.1 version - Latest release: over 1 year ago - 14 downloads last month - 1 maintainer
biobb-disc4alldata 0.0.12
Biobb_disc4alldata is a complete code wrapper to interrogate the Disc4All pre-process database RE...12 versions - Latest release: over 2 years ago - 47 downloads last month - 1 stars on GitHub - 1 maintainer
biobb-disgenet 1.1.28
Biobb_disgenet is a complete code wrapper to interrogate the DisGeNET database REST API.60 versions - Latest release: over 2 years ago - 149 downloads last month - 1 stars on GitHub - 1 maintainer
biobb-guild 1.12.3
Biobb_Guild is use case to build a prioritize PPI Network through Disc4All pre-process database R...16 versions - Latest release: over 1 year ago - 53 downloads last month - 1 maintainer
biobb-adapters 4.0.0
Biobb_adapters is the Biobb module collection to use the building blocks with several workflow ma...10 versions - Latest release: about 1 year ago - 1 dependent repositories - 77 downloads last month - 0 stars on GitHub - 2 maintainers
biobb-pytorch 4.1.3
biobb_pytorch is the Biobb module collection to create and train ML & DL models.6 versions - Latest release: 27 days ago - 406 downloads last month - 1 stars on GitHub - 1 maintainer
biobb-model 4.1.0
Biobb_model is the Biobb module collection to check and model 3d structures, create mutations or ...35 versions - Latest release: 9 months ago - 1 dependent package - 1 dependent repositories - 301 downloads last month - 1 stars on GitHub - 2 maintainers
biobb 1.0.2
Biobb module collection.3 versions - Latest release: about 5 years ago - 1 dependent repositories - 21 downloads last month - 50 stars on GitHub - 2 maintainers
biobb-pmx 4.1.0
Biobb_pmx is the Biobb module collection to perform PMX (http://pmx.mpibpc.mpg.de) executions.17 versions - Latest release: 9 months ago - 1 dependent repositories - 184 downloads last month - 2 stars on GitHub - 2 maintainers
biobb-wf-mutations 0.0.6
Lysozyme + Mutations workflow built using BioBB Based on the official Gromacs tutorial: http://ww...6 versions - Latest release: about 5 years ago - 1 dependent repositories - 46 downloads last month - 7 stars on GitHub - 2 maintainers
biobb-md 3.7.2
Deprecated Package: biobb_md is no longer maintained and has been superseded by the biobb_gromacs...19 versions - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 145 downloads last month - 7 stars on GitHub - 2 maintainers
biobb-structure-checking 3.13.4
BioBB_structure_checking performs MDWeb structure checking tool set as a command line utility.35 versions - Latest release: 9 months ago - 3 dependent packages - 1 dependent repositories - 404 downloads last month - 8 stars on GitHub - 2 maintainers
biobb-pdb-tools 4.1.1
Biobb_pdb_tools is a swiss army knife for manipulating and editing PDB files.3 versions - Latest release: 4 months ago - 96 downloads last month - 0 stars on GitHub - 2 maintainers
biobb-common 4.2.0
Biobb_common is the base package required to use the biobb packages.27 versions - Latest release: 20 days ago - 21 dependent packages - 1 dependent repositories - 984 downloads last month - 0 stars on GitHub - 2 maintainers
biobb-dna 4.1.0
Biobb_dna is a package composed of different analyses for nucleic acid trajectories.14 versions - Latest release: 9 months ago - 1 dependent repositories - 67 downloads last month - 0 stars on GitHub - 2 maintainers
biobb-vs 4.1.2
Biobb_vs is the Biobb module collection to perform virtual screening studies.13 versions - Latest release: 26 days ago - 1 dependent repositories - 171 downloads last month - 1 stars on GitHub - 1 maintainer
biobb-structure-utils 4.1.0
biobb_structure_utils is the Biobb module collection to perform basic manipulations on 3d structu...21 versions - Latest release: 9 months ago - 1 dependent repositories - 154 downloads last month - 2 stars on GitHub - 2 maintainers
biobb-ml 4.1.0
Biobb_ml is the Biobb module collection to perform machine learning predictions.12 versions - Latest release: 9 months ago - 1 dependent repositories - 82 downloads last month - 1 stars on GitHub - 1 maintainer
biobb-io 4.1.1
Biobb_io is the Biobb module collection to fetch data to be consumed by the rest of the Biobb bui...29 versions - Latest release: 27 days ago - 1 dependent package - 1 dependent repositories - 344 downloads last month - 2 stars on GitHub - 2 maintainers
biobb-gromacs 4.1.1
biobb_gromacs is the Biobb module collection to perform molecular dynamics simulations.7 versions - Latest release: 8 months ago - 1 dependent package - 87 downloads last month - 1 stars on GitHub - 2 maintainers
biobb-godmd 4.1.0
Biobb_godmd is a BioBB category for GOdMD tool (protein conformational transitions).7 versions - Latest release: 9 months ago - 19 downloads last month - 0 stars on GitHub - 2 maintainers
biobb-flexserv 4.1.0
biobb_flexserv is a BioBB category for biomolecular flexibility studies on protein 3D structures.8 versions - Latest release: 9 months ago - 33 downloads last month - 1 stars on GitHub - 2 maintainers
biobb-flexdyn 4.1.0
biobb_flexdyn is a BioBB category for studies on the conformational landscape of native proteins.7 versions - Latest release: 9 months ago - 30 downloads last month - 1 stars on GitHub - 2 maintainers
biobb-cp2k 4.1.0
Biobb_cp2k is a BioBB category for CP2K QM package.8 versions - Latest release: 9 months ago - 41 downloads last month - 1 stars on GitHub - 1 maintainer
biobb-cmip 4.1.1
biobb_cmip is the Biobb module collection to compute classical molecular interaction potentials.15 versions - Latest release: 3 months ago - 1 dependent repositories - 65 downloads last month - 0 stars on GitHub - 2 maintainers
biobb-chemistry 4.1.0
Biobb_chemistry is the Biobb module collection to perform chemistry over molecular dynamics simul...22 versions - Latest release: 9 months ago - 1 dependent repositories - 165 downloads last month - 4 stars on GitHub - 2 maintainers
biobb-amber 4.1.0
Biobb_amber is a BioBB category for AMBER MD package.12 versions - Latest release: 9 months ago - 1 dependent repositories - 70 downloads last month - 7 stars on GitHub - 3 maintainers
biobb-analysis 4.1.0
Biobb_analysis is the Biobb module collection to perform analysis of molecular dynamics simulations.40 versions - Latest release: 9 months ago - 2 dependent packages - 1 dependent repositories - 234 downloads last month - 3 stars on GitHub - 2 maintainers
biobb-radiospineomics 1.1.20
Biobb_Radiospineomics is a wrapped code for the extraction of conventional IVD features and radio...22 versions - Latest release: 3 months ago - 75 downloads last month - 0 stars on GitHub - 1 maintainer
biobb-netprop 1.12.3
Biobb_NetProp is use case to build a prioritize PPI Network through Disc4All pre-process database...1 version - Latest release: about 1 year ago - 11 downloads last month - 0 stars on GitHub - 1 maintainer
biobb-structure-manager 3.0.2
BioBB_structure_manager is a library to efficiently load and process biomolecular 3D structures.10 versions - Latest release: about 4 years ago - 1 dependent package - 1 dependent repositories - 112 downloads last month - 1 stars on GitHub - 2 maintainers
biobb-remote 1.2.2
Biobb_remote is the Biobb module for remote execution via ssl.3 versions - Latest release: over 2 years ago - 1 dependent repositories - 45 downloads last month - 1 stars on GitHub - 2 maintainers