Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "Workflows" keyword
c8-target-postgres 0.0.2
Pipelinewise target for writing data into Postgres.2 versions - Latest release: over 1 year ago - 24 downloads last month - 1 maintainer
macrometa-target-mysql 0.0.12
A Meltano target for MySQL.12 versions - Latest release: 8 months ago - 80 downloads last month - 1,226 stars on GitHub - 1 maintainer
biobb-pytorch 4.1.3
biobb_pytorch is the Biobb module collection to create and train ML & DL models.4 versions - Latest release: 15 days ago - 424 downloads last month - 1 stars on GitHub - 1 maintainer
biobb-radiospineomics 1.1.20
Biobb_Radiospineomics is a wrapped code for the extraction of conventional IVD features and radio...22 versions - Latest release: 2 months ago - 75 downloads last month - 0 stars on GitHub - 1 maintainer
Top 2.4% on pypi.org
124 versions - Latest release: 9 days ago - 20 dependent packages - 35 dependent repositories - 520 thousand downloads last month - 454 stars on GitHub - 3 maintainers
parsl 2024.5.13
Simple data dependent workflows in Python124 versions - Latest release: 9 days ago - 20 dependent packages - 35 dependent repositories - 520 thousand downloads last month - 454 stars on GitHub - 3 maintainers
Top 7.0% on pypi.org
23 versions - Latest release: about 2 months ago - 8 dependent repositories - 579 downloads last month - 45 stars on GitHub - 3 maintainers
colmena 0.6.1
colmena: Intelligent Steerable Pipelines on HPC23 versions - Latest release: about 2 months ago - 8 dependent repositories - 579 downloads last month - 45 stars on GitHub - 3 maintainers
biobb-flexserv 4.1.0
biobb_flexserv is a BioBB category for biomolecular flexibility studies on protein 3D structures.7 versions - Latest release: 9 months ago - 56 downloads last month - 1 stars on GitHub - 2 maintainers
biobb-gromacs 4.1.1
biobb_gromacs is the Biobb module collection to perform molecular dynamics simulations.6 versions - Latest release: 8 months ago - 1 dependent package - 164 downloads last month - 1 stars on GitHub - 2 maintainers
biobb-common 4.2.0
Biobb_common is the base package required to use the biobb packages.27 versions - Latest release: 9 days ago - 21 dependent packages - 1 dependent repositories - 712 downloads last month - 0 stars on GitHub - 2 maintainers
biobb-model 4.1.0
Biobb_model is the Biobb module collection to check and model 3d structures, create mutations or ...34 versions - Latest release: 8 months ago - 1 dependent package - 1 dependent repositories - 485 downloads last month - 1 stars on GitHub - 2 maintainers
biobb-pmx 4.1.0
Biobb_pmx is the Biobb module collection to perform PMX (http://pmx.mpibpc.mpg.de) executions.15 versions - Latest release: 8 months ago - 1 dependent repositories - 161 downloads last month - 2 stars on GitHub - 2 maintainers
biobb-vs 4.1.2
Biobb_vs is the Biobb module collection to perform virtual screening studies.12 versions - Latest release: 15 days ago - 1 dependent repositories - 197 downloads last month - 1 stars on GitHub - 1 maintainer
biobb-pdb-tools 4.1.1
Biobb_pdb_tools is a swiss army knife for manipulating and editing PDB files.2 versions - Latest release: 4 months ago - 22 downloads last month - 0 stars on GitHub - 2 maintainers
macrometa-target-oracle 1.0.0
Macrometa target connector for writing data into Oracle DB.17 versions - Latest release: 10 months ago - 93 downloads last month - 1 maintainer
macrometa-target-mssql 1.0.0
Macrometa target connector for writing data into Microsoft SQL Server.46 versions - Latest release: 10 months ago - 244 downloads last month - 1 maintainer
macrometa-source-mssql 1.0.0
Macrometa Source for extracting data from Microsoft SQL Server.15 versions - Latest release: 10 months ago - 103 downloads last month - 1 maintainer
biobb-netprop 1.12.3
Biobb_NetProp is use case to build a prioritize PPI Network through Disc4All pre-process database...1 version - Latest release: about 1 year ago - 11 downloads last month - 0 stars on GitHub - 1 maintainer
macrometa-target-postgres 1.0.0
Pipelinewise target for writing data into Postgres.38 versions - Latest release: 10 months ago - 9 downloads last month - 1 maintainer
macrometa-target-collection 1.0.2
Singer.io target for writing to Macrometa GDN collections63 versions - Latest release: 7 months ago - 530 downloads last month - 1 maintainer
macrometa-source-postgres 1.0.0
Macrometa Source for extracting data from PostgreSQL.41 versions - Latest release: 10 months ago - 89 downloads last month - 1 maintainer
biobb-godmd 4.1.0
Biobb_godmd is a BioBB category for GOdMD tool (protein conformational transitions).6 versions - Latest release: 9 months ago - 49 downloads last month - 0 stars on GitHub - 2 maintainers
polyfuse 0.1.0a0
A meta-caller for fusion transcript detection1 version - Latest release: 9 months ago - 1 dependent repositories - 2 downloads last month - 0 stars on GitHub - 1 maintainer
parsl-dag-vis 0.1.6
DAG visualization code to be run from Jupyter notebooks to visualize data flow dependency graphs ...7 versions - Latest release: over 6 years ago - 1 dependent repositories - 44 downloads last month - 6 stars on GitHub - 1 maintainer
libsubmit 0.5.0
Uniform interface to clouds, clusters, grids and supercomputers.21 versions - Latest release: almost 6 years ago - 1 dependent package - 2 dependent repositories - 176 downloads last month - 15 stars on GitHub - 2 maintainers
biobb-structure-checking 3.13.4
BioBB_structure_checking performs MDWeb structure checking tool set as a command line utility.35 versions - Latest release: 8 months ago - 3 dependent packages - 1 dependent repositories - 453 downloads last month - 8 stars on GitHub - 2 maintainers
macrometa-source-mysql 0.0.18
Macrometa Source for extracting data from MySQL database.18 versions - Latest release: 9 months ago - 108 downloads last month - 1 maintainer
biobb-flexdyn 4.1.0
biobb_flexdyn is a BioBB category for studies on the conformational landscape of native proteins.6 versions - Latest release: 9 months ago - 59 downloads last month - 1 stars on GitHub - 2 maintainers
biobb-wf-mutations 0.0.6
Lysozyme + Mutations workflow built using BioBB Based on the official Gromacs tutorial: http://ww...6 versions - Latest release: about 5 years ago - 1 dependent repositories - 58 downloads last month - 7 stars on GitHub - 2 maintainers
biobb-structure-utils 4.1.0
biobb_structure_utils is the Biobb module collection to perform basic manipulations on 3d structu...20 versions - Latest release: 8 months ago - 1 dependent repositories - 154 downloads last month - 2 stars on GitHub - 2 maintainers
biobb-structure-manager 3.0.2
BioBB_structure_manager is a library to efficiently load and process biomolecular 3D structures.10 versions - Latest release: about 4 years ago - 1 dependent package - 1 dependent repositories - 112 downloads last month - 1 stars on GitHub - 2 maintainers
biobb-remote 1.2.2
Biobb_remote is the Biobb module for remote execution via ssl.3 versions - Latest release: over 2 years ago - 1 dependent repositories - 45 downloads last month - 1 stars on GitHub - 2 maintainers
biobb-md 3.7.2
Deprecated Package: biobb_md is no longer maintained and has been superseded by the biobb_gromacs...19 versions - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 147 downloads last month - 7 stars on GitHub - 2 maintainers
biobb-ml 4.1.0
Biobb_ml is the Biobb module collection to perform machine learning predictions.11 versions - Latest release: 9 months ago - 1 dependent repositories - 82 downloads last month - 1 stars on GitHub - 1 maintainer
biobb-disgenet 1.1.28
Biobb_disgenet is a complete code wrapper to interrogate the DisGeNET database REST API.60 versions - Latest release: over 2 years ago - 387 downloads last month - 1 stars on GitHub - 1 maintainer
biobb-disc4alldata 0.0.12
Biobb_disc4alldata is a complete code wrapper to interrogate the Disc4All pre-process database RE...12 versions - Latest release: about 2 years ago - 127 downloads last month - 1 stars on GitHub - 1 maintainer
biobb-analysis 4.1.0
Biobb_analysis is the Biobb module collection to perform analysis of molecular dynamics simulations.39 versions - Latest release: 9 months ago - 2 dependent packages - 1 dependent repositories - 409 downloads last month - 3 stars on GitHub - 2 maintainers
biobb-cmip 4.1.1
biobb_cmip is the Biobb module collection to compute classical molecular interaction potentials.14 versions - Latest release: 3 months ago - 1 dependent repositories - 113 downloads last month - 0 stars on GitHub - 2 maintainers
biobb 1.0.2
Biobb module collection.3 versions - Latest release: about 5 years ago - 1 dependent repositories - 43 downloads last month - 48 stars on GitHub - 2 maintainers
c8-target-c8collection 0.0.25
Singer.io target for writing to C8DB collection25 versions - Latest release: over 1 year ago - 145 downloads last month - 1 maintainer
biobb-io 4.1.1
Biobb_io is the Biobb module collection to fetch data to be consumed by the rest of the Biobb bui...28 versions - Latest release: 16 days ago - 1 dependent package - 1 dependent repositories - 451 downloads last month - 2 stars on GitHub - 2 maintainers
biobb-chemistry 4.1.0
Biobb_chemistry is the Biobb module collection to perform chemistry over molecular dynamics simul...21 versions - Latest release: 9 months ago - 1 dependent repositories - 186 downloads last month - 4 stars on GitHub - 2 maintainers
biobb-amber 4.1.0
Biobb_amber is a BioBB category for AMBER MD package.11 versions - Latest release: 9 months ago - 1 dependent repositories - 115 downloads last month - 7 stars on GitHub - 3 maintainers
macrometa-target-mongo 1.0.0
Macrometa connector for writing data into MongoDB, can be used as a target for any Data Mesh Inte...19 versions - Latest release: 10 months ago - 150 downloads last month - 1 maintainer
biobb-dna 4.1.0
Biobb_dna is a package composed of different analyses for nucleic acid trajectories.13 versions - Latest release: 9 months ago - 1 dependent repositories - 99 downloads last month - 0 stars on GitHub - 2 maintainers
biobb-cp2k 4.1.0
Biobb_cp2k is a BioBB category for CP2K QM package.7 versions - Latest release: 9 months ago - 61 downloads last month - 1 stars on GitHub - 1 maintainer
c8-source-oracle 0.0.7
Pipelinewise tap for reading from oracle databases. This includes support for PDBs.7 versions - Latest release: over 1 year ago - 77 downloads last month - 1 maintainer
macrometa-source-mongo 1.0.0
Macrometa Source for extracting data from MongoDB.44 versions - Latest release: 10 months ago - 145 downloads last month - 1 maintainer
macrometa-source-collection 1.0.5
Pipelinewise tap for reading from GDN Collections58 versions - Latest release: 7 months ago - 373 downloads last month - 1 maintainer
macrometa-source-oracle 1.0.0
Macrometa source oracle connector for reading from oracle databases.31 versions - Latest release: 10 months ago - 74 downloads last month - 1 maintainer
biobb-3dshaper 0.1
Biobb_3DShaper is use case to run a simulation with 3DSHAPER and PyTorch.1 version - Latest release: over 1 year ago - 22 downloads last month - 1 maintainer
biobb-guild 1.12.3
Biobb_Guild is use case to build a prioritize PPI Network through Disc4All pre-process database R...16 versions - Latest release: over 1 year ago - 110 downloads last month - 1 maintainer
biobb-adapters 4.0.0
Biobb_adapters is the Biobb module collection to use the building blocks with several workflow ma...10 versions - Latest release: about 1 year ago - 1 dependent repositories - 125 downloads last month - 0 stars on GitHub - 2 maintainers
c8-source-c8collection 0.0.10
Pipelinewise tap for reading from C8 Collections10 versions - Latest release: over 1 year ago - 73 downloads last month - 1 maintainer
c8connector 0.0.32
C8 Connector Interface32 versions - Latest release: 9 months ago - 22 dependent packages - 293 downloads last month - 1 maintainer
Top 5.6% on pypi.org
1 version - Latest release: over 1 year ago
c8cws 0.0.1 removed
C8 Connectors Workflow Service1 version - Latest release: over 1 year ago
Related Keywords
Compatibility
32
BioExcel
32
Bioinformatics
32
ELT
18
Connectors
18
Macrometa
17
Target
8
Source
6
Scientific computing
4
Protein
3
GDN
3
Structure
2
Ensembles
2
Flexibility
2
Postgres
2
Collection
2
MongoDB
2
MySQL
2
Tap
2
Oracle
2
parsl
1
data-analysis
1
jupyter
1
visualization
1
bioinformatics
1
fusion transcript detection
1
MariaDB
1
3D-Bioinfo
1
ELIXIR
1
FlexDyn
1
C8DB
1
MD
1
Amber
1
QM
1
CP2K
1
C8Collection
1
etl
1
etl-framework
1
python
1
singer
1
hacktoberfest
1
HPC
1
AI
1
high-performance-computing
1
machine-learning
1
workflow
1
OracleDB
1
MicrosoftSQLServer
1
MSSQL
1
Microsoft SQL Server
1
PostgreSQL
1
Ensemble
1
Transitions
1
GOdMD
1