pypi.org "electron microscopy" keyword
nanoparticleatomcounting 0.1.1
Estimate atom counts in metal nanoparticles given radius and contact angle1 version - Latest release: over 1 year ago - 67 downloads last month - 1 stars on GitHub - 1 maintainer
clemreg 0.0.0
Core registration library for CLEM-Reg (placeholder — see the napari-clemreg plugin).1 version - Latest release: 2 months ago - 21 downloads last month - 23 stars on GitHub - 1 maintainer
seq-io 0.10
Import .seq files into hyperspy4 versions - Latest release: over 5 years ago - 1 dependent repositories - 22 downloads last month - 0 stars on GitHub - 1 maintainer
Top 6.3% on pypi.org
31 versions - Latest release: over 1 year ago - 4 dependent packages - 2 dependent repositories - 13.1 thousand downloads last month - 177 stars on GitHub - 3 maintainers
pyxem 0.21.0
multi-dimensional diffraction microscopy31 versions - Latest release: over 1 year ago - 4 dependent packages - 2 dependent repositories - 13.1 thousand downloads last month - 177 stars on GitHub - 3 maintainers
Top 9.4% on pypi.org
87 versions - Latest release: over 2 years ago - 2 dependent packages - 1 dependent repositories - 444 downloads last month - 280 stars on GitHub - 2 maintainers
pycroscopy 0.63.3
Python library for scientific analysis of microscopy data87 versions - Latest release: over 2 years ago - 2 dependent packages - 1 dependent repositories - 444 downloads last month - 280 stars on GitHub - 2 maintainers
pycotem 2.13.0
A python package for working with crystal orientations in transmission electron microscopy36 versions - Latest release: over 1 year ago - 1 dependent repositories - 28 downloads last month - 15 stars on GitHub - 1 maintainer
libertem-holo 1.0.0
Electron holography reconstruction using LiberTEM5 versions - Latest release: 4 months ago - 33 downloads last month - 7 stars on GitHub - 2 maintainers
instrumentools 0.1.3
Data processing and plotting scripts for chemistry workflows1 version - Latest release: about 6 years ago - 1 dependent repositories - 33 downloads last month - 3 stars on GitHub - 1 maintainer
lumispy 0.3.0
Analysis of luminescence spectroscopy data with HyperSpy.7 versions - Latest release: over 1 year ago - 1 dependent repositories - 106 downloads last month - 32 stars on GitHub - 3 maintainers
inpystem 0.1.1
A python library for STEM acquisition inpainting.5 versions - Latest release: over 6 years ago - 18 downloads last month - 4 stars on GitHub - 1 maintainer
rosettasciio 0.15.0
Reading and writing scientific file formats16 versions - Latest release: about 1 month ago - 2 dependent packages - 1 dependent repositories - 33 thousand downloads last month - 73 stars on GitHub - 1 maintainer
Top 2.4% on pypi.org
51 versions - Latest release: about 1 month ago - 26 dependent packages - 57 dependent repositories - 22.5 thousand downloads last month - 585 stars on GitHub - 3 maintainers
hyperspy 2.5.0
Multidimensional data analysis toolbox51 versions - Latest release: about 1 month ago - 26 dependent packages - 57 dependent repositories - 22.5 thousand downloads last month - 585 stars on GitHub - 3 maintainers
holospy 0.4.0
Analysis of (off-axis) electron holography data with HyperSpy.5 versions - Latest release: 19 days ago - 1 dependent package - 148 downloads last month - 7 stars on GitHub - 1 maintainer
exspy 0.3.2
EELS and EDS analysis with the HyperSpy framework6 versions - Latest release: over 1 year ago - 2 dependent packages - 4.8 thousand downloads last month - 16 stars on GitHub - 1 maintainer
nuscope 0.5.1
Read, analyze, save and trace electron-microscopy data at the NUANCE Center, Northwestern University4 versions - Latest release: 7 days ago - 0 downloads last month - 0 stars on GitHub - 1 maintainer
nuance-datacite 0.1.1
DataCite DOIs for NUANCE Center instruments and the data they collect, linked to NUScope seals2 versions - Latest release: 7 days ago - 0 downloads last month - 1 maintainer
nuance-gms-mcp 0.1.1
Model Context Protocol server for Gatan Microscopy Suite 3.60 — multimodal TEM/STEM/EELS/4D-STEM ...2 versions - Latest release: 8 months ago - 76 downloads last month - 0 stars on GitHub - 1 maintainer
napari-quantem 0.1.0
QuantEM & OmniEM vision-transformer organelle segmentation for electron microscopy1 version - Latest release: 3 months ago - 25 downloads last month - 0 stars on GitHub - 1 maintainer
em-database 0.5.0
A database for electron microscopy data using pooch to download and manage files.5 versions - Latest release: about 2 months ago - 3.42 thousand downloads last month - 1 stars on GitHub - 2 maintainers
dna2graph 1.0.2
Imaging software that automates the segmentation and analysis of DNA molecules in electron micros...2 versions - Latest release: 3 months ago - 22 downloads last month - 0 stars on GitHub - 1 maintainer
py4d-browser-edax 0.1.0
py4d-browser plugin for loading EDAX TSL UP1/UP2 EBSD pattern files1 version - Latest release: 5 months ago - 0 stars on GitHub - 1 maintainer
py4d-browser-h5oina 0.1.0
py4d-browser plugin for loading Oxford Instruments h5oina EBSD pattern files1 version - Latest release: 5 months ago - 16 downloads last month - 0 stars on GitHub - 1 maintainer
emdatabridge 0.1.0
Electron-microscopy data formats (standardize, translate, discover) and the shared researcher ide...1 version - Latest release: 23 days ago - 0 downloads last month - 0 stars on GitHub - 1 maintainer
hyperspyui 2.0.2
Hyperspy Graphical User Interface16 versions - Latest release: almost 2 years ago - 1 dependent repositories - 75 downloads last month - 32 stars on GitHub - 2 maintainers
emicroml 0.0.7
A Python library for training machine learning models for applications in electron microscopy.7 versions - Latest release: 8 months ago - 201 downloads last month - 0 stars on GitHub - 1 maintainer
sem-meta 0.1.1
Unified interface for SEM image processing: metadata extraction, OCR-based pixel size estimation,...2 versions - Latest release: about 1 year ago - 22 downloads last month - 0 stars on GitHub - 2 maintainers
nanoparticleatomcounter 0.1.7
Estimates atom counts in monometallic nanoparticles given radius and contact angle6 versions - Latest release: 9 months ago - 71 downloads last month - 0 stars on GitHub - 1 maintainer
cryoblob 2025.8.2
Particle Picking of Cryo-EM Datasets7 versions - Latest release: about 1 year ago - 63 downloads last month - 0 stars on GitHub - 1 maintainer
tempo4d 0.1.8
A 4D-STEM and diffraction data processing pipeline using ML object detection7 versions - Latest release: over 1 year ago - 9 downloads last month - 2 stars on GitHub - 1 maintainer
convert-emd 1.0.2
Convert Velox generated EMD data into images.11 versions - Latest release: 8 months ago - 21 downloads last month - 0 stars on GitHub - 1 maintainer
ptyrodactyl 2026.3.24
Ptychography through differentiable programming in JAX27 versions - Latest release: 8 months ago - 63 downloads last month - 10 stars on GitHub - 1 maintainer
espm 1.1.3
Electron SPectro-Microscopy Python Library9 versions - Latest release: over 1 year ago - 55 downloads last month - 18 stars on GitHub - 2 maintainers
dm4 1.0.3
Pure Python reader for Gatan Digital Micrograph 4 (DM4) files, providing access to image data and...4 versions - Latest release: over 1 year ago - 1.03 thousand downloads last month - 2 stars on GitHub - 1 maintainer
brook-cu12 0.1.0
TEASAR skeletonization of 3D label volumes on NVIDIA GPUs1 version - Latest release: about 1 month ago - 106 downloads last month - 4 stars on GitHub - 1 maintainer
de-twin 0.1.1
Digital twin of a Direct Electron camera on a TEM: column, specimen, in-situ holder and detector,...2 versions - Latest release: about 1 month ago - 211 downloads last month - 0 stars on GitHub - 1 maintainer
electroncounting 1.0.0
Count single electron in direct electron detector data8 versions - Latest release: over 3 years ago - 59 downloads last month - 3 stars on GitHub - 1 maintainer
quantem-core 0.1.0
Inference and lightweight adaptation for the QuantEM and OmniEM electron-microscopy organelle seg...1 version - Latest release: 3 months ago - 1 maintainer
nuance-mcp 0.2.0
Vendor-agnostic Model Context Protocol server for multimodal electron microscopy — schema-bound t...1 version - Latest release: 6 months ago - 14 downloads last month - 1 maintainer
Related Keywords
microscopy
15
TEM
12
STEM
11
data analysis
10
python
9
hyperspy
8
electron-microscopy
7
multi-dimensional
6
spectroscopy
6
4D-STEM
5
materials-science
5
data-analysis
5
machine learning
5
hyperspectral
5
SEM
5
EELS
5
physical-sciences
4
data-visualization
4
EDS
4
scipy
4
eds
4
hyperspy-extension
4
numpy
4
multidimensional
4
diffraction
4
segmentation
4
electron energy loss spectroscopy
4
model
3
X-ray energy-dispersive spectroscopy
3
NUANCE
3
hyperspectrum
3
curve fitting
3
raman
3
spectrum image
3
EDX
3
Gatan
3
provenance
3
EBSD
3
jax
2
image processing
2
image
2
ptychography
2
4d-stem
2
cbed
2
msa
2
materials science
2
img
2
emd
2
dm4
2
dm3
2
JAX
2
py4d-browser
2
machine-learning
2
electron-holography
2
x-ray-spectroscopy
2
eels
2
active site
2
tem
2
nanoparticle
2
object detection
2
Raman
2
organelle
2
energy-dispersive X-ray spectroscopy
2
scientific
2
electron diffraction
2
electron-diffraction
2
life-sciences
2
PCA
2
MCP
2
quantification
2
model context protocol
2
LLM
2
Ollama
2
FAIR
2
cathodoluminescence
2
PL
2
DigitalMicrograph
2
autonomous microscopy
2
CL
2
photoluminescence
2
calorimetry
1
statistics
1
stem
1
chemistry
1
signal-processing
1
scanning-tunnelling-microscopy
1
scanning-probe-microscopy
1
scanning
1
stm
1
Globus
1
FIB
1
visualization
1
direct electron detector
1
Faster R-CNN
1
metadata
1
ORCID
1
EFTEM
1
x-rays
1
atomic force microscopy
1
SIMS
1