Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "microscopy" keyword
holospy 0.1.1
Analysis of (off-axis) electron holography data with HyperSpy.4 versions - Latest release: 5 months ago - 422 downloads last month - 6 stars on GitHub - 2 maintainers
rosettasciio 0.4
Reading and writing scientific file formats4 versions - Latest release: about 1 month ago - 1 dependent repositories - 15.1 thousand downloads last month - 42 stars on GitHub - 2 maintainers
Top 4.9% on pypi.org
38 versions - Latest release: about 2 months ago - 19 dependent packages - 17 dependent repositories - 33.2 thousand downloads last month - 45 stars on GitHub - 1 maintainer
ome-types 0.5.1
Python dataclasses for the OME data model38 versions - Latest release: about 2 months ago - 19 dependent packages - 17 dependent repositories - 33.2 thousand downloads last month - 45 stars on GitHub - 1 maintainer
hyperspyui 1.3.1
Hyperspy Graphical User Interface14 versions - Latest release: about 1 year ago - 1 dependent repositories - 202 downloads last month - 25 stars on GitHub - 4 maintainers
exspy 0.2
EELS and EDS analysis with the HyperSpy framework2 versions - Latest release: 26 days ago - 1.73 thousand downloads last month - 8 stars on GitHub - 1 maintainer
llspy 0.5.1
Lattice Light Sheet Processing Tools.2 versions - Latest release: about 1 month ago - 1 dependent repositories - 30 downloads last month - 25 stars on GitHub - 2 maintainers
pycudadecon 0.4.1
Python wrapper for CUDA-accelerated 3D deconvolution3 versions - Latest release: 8 months ago - 1 dependent repositories - 49 downloads last month - 55 stars on GitHub - 1 maintainer
fpbase 0.0.1rc0
Stub for future FPbase API1 version - Latest release: 4 months ago - 11 downloads last month - 62 stars on GitHub - 1 maintainer
Top 4.0% on pypi.org
325 versions - Latest release: 27 days ago - 16 dependent packages - 45 dependent repositories - 4.63 thousand downloads last month - 121 stars on GitHub - 1 maintainer
cloud-volume 8.32.1
A serverless client for reading and writing Neuroglancer Precomputed volumes both locally and on ...325 versions - Latest release: 27 days ago - 16 dependent packages - 45 dependent repositories - 4.63 thousand downloads last month - 121 stars on GitHub - 1 maintainer
tunacell 0.2.2
Analysis of Timeseries from dividing UNicellular microorganisms6 versions - Latest release: over 4 years ago - 1 dependent repositories - 36 downloads last month - 1 stars on GitHub - 2 maintainers
Top 8.6% on pypi.org
45 versions - Latest release: 2 days ago - 4 dependent packages - 2 dependent repositories - 5.52 thousand downloads last month - 21 stars on GitHub - 1 maintainer
pymmcore-plus 0.9.5
pymmcore superset providing improved APIs, event handling, and a pure python acquisition engine45 versions - Latest release: 2 days ago - 4 dependent packages - 2 dependent repositories - 5.52 thousand downloads last month - 21 stars on GitHub - 1 maintainer
cucim-cu12 24.4.0
cuCIM - an extensible toolkit designed to provide GPU accelerated I/O, computer vision & image pr...3 versions - Latest release: 25 days ago - 2.01 thousand downloads last month - 310 stars on GitHub - 3 maintainers
cucim-cu11 24.4.0
cuCIM - an extensible toolkit designed to provide GPU accelerated I/O, computer vision & image pr...3 versions - Latest release: 25 days ago - 336 downloads last month - 310 stars on GitHub - 3 maintainers
Top 2.7% on pypi.org
31 versions - Latest release: 7 months ago - 11 dependent packages - 43 dependent repositories - 7.79 thousand downloads last month - 310 stars on GitHub - 5 maintainers
cucim 23.10.0
cuCIM - an extensible toolkit designed to provide GPU accelerated I/O, computer vision & image pr...31 versions - Latest release: 7 months ago - 11 dependent packages - 43 dependent repositories - 7.79 thousand downloads last month - 310 stars on GitHub - 5 maintainers
utoolbox-image 0.0.2
Image processing functions for uToolbox.2 versions - Latest release: almost 4 years ago - 1 dependent repositories - 23 downloads last month - 0 stars on GitHub - 2 maintainers
smo 2.0.2
Implementation of the Silver Mountain Operator (SMO) for the estimation of background distributions.5 versions - Latest release: about 1 year ago - 1 dependent repositories - 79 downloads last month - 12 stars on GitHub - 2 maintainers
bioio-ome-tiff 1.0.0
A BioIO reader plugin for reading tiff files in the OME format.2 versions - Latest release: 5 months ago - 613 downloads last month - 0 stars on GitHub - 2 maintainers
napari-micromanager 0.1.0
Micro-Manager GUI interface in napari.7 versions - Latest release: 2 months ago - 1 dependent repositories - 89 downloads last month - 57 stars on GitHub - 2 maintainers
Top 8.7% on pypi.org
20 versions - Latest release: 7 months ago - 4 dependent packages - 3 dependent repositories - 5.84 thousand downloads last month - 14 stars on GitHub - 1 maintainer
useq-schema 0.4.7
Schema for multi-dimensional microscopy experiments20 versions - Latest release: 7 months ago - 4 dependent packages - 3 dependent repositories - 5.84 thousand downloads last month - 14 stars on GitHub - 1 maintainer
pymmcore-widgets 0.7.1
A set of Qt-based widgets onto the pymmcore-plus model19 versions - Latest release: about 2 months ago - 1 dependent package - 1 dependent repositories - 678 downloads last month - 8 stars on GitHub - 4 maintainers
jicbioimage.core 0.15.0
Python package designed to make it easy to work with bio images.23 versions - Latest release: over 7 years ago - 7 dependent repositories - 59 downloads last month - 1 stars on GitHub - 2 maintainers
tiftool 0.2.4
tiftool22 versions - Latest release: over 3 years ago - 1 dependent repositories - 74 downloads last month - 2 maintainers
niddl 0.1.8
Neuro Imaging Denoising via Deep Learning (NIDDL)9 versions - Latest release: 10 months ago - 83 downloads last month - 8 stars on GitHub - 2 maintainers
Top 9.6% on pypi.org
17 versions - Latest release: 11 months ago - 5 dependent packages - 2 dependent repositories - 4.88 thousand downloads last month - 9 stars on GitHub - 2 maintainers
hyperspy-gui-traitsui 1.5.3
traitsui GUI elements for the HyperSpy framework.17 versions - Latest release: 11 months ago - 5 dependent packages - 2 dependent repositories - 4.88 thousand downloads last month - 9 stars on GitHub - 2 maintainers
pyminflux 0.4.0
Reader, processor, and viewer of MINFLUX raw data.7 versions - Latest release: about 1 month ago - 40 downloads last month - 7 stars on GitHub - 2 maintainers
pytemlib 0.6.2019
pyTEM: TEM Data Quantification library through a model-based approach74 versions - Latest release: almost 5 years ago - 1 dependent repositories - 679 downloads last month - 16 stars on GitHub - 2 maintainers
access2thematrix 0.4.4
Scienta Omicron (NanoScience) (NanoTechnology) MATRIX Control System result file accessing tool12 versions - Latest release: about 1 year ago - 133 downloads last month - 2 maintainers
frc 0.1.1
Library for computing Fourier Ring Correlation (FRC) curves and using them to determine image res...2 versions - Latest release: about 1 month ago - 1 dependent repositories - 70 downloads last month - 1 stars on GitHub - 2 maintainers
ddmtools 0.3.0
A Python library for doing differential dynamic microscopy on polydisperse samples7 versions - Latest release: about 2 years ago - 1 dependent repositories - 73 downloads last month - 1 stars on GitHub - 2 maintainers
ndexchange 1.0.10
Python 3 program to download data from NeuroData11 versions - Latest release: about 5 years ago - 1 dependent repositories - 11 downloads last month - 4 stars on GitHub - 2 maintainers
mate-for-dummies 0.5.2
MATE for Dummies. Scienta Omicron MATE Scripting System in Python3 versions - Latest release: almost 4 years ago - 1 dependent repositories - 26 downloads last month - 1 maintainer
pydhm 1.0.5
An open-source Python library to numerically recover the complex wavefield information of samples...6 versions - Latest release: over 1 year ago - 1 dependent repositories - 63 downloads last month - 15 stars on GitHub - 2 maintainers
ashlar 1.18.0
Alignment by Simultaneous Harmonization of Layer/Adjacency Registration34 versions - Latest release: 3 months ago - 2 dependent repositories - 338 downloads last month - 111 stars on GitHub - 1 maintainer
uspy 0.10.1
LEEM data analysis (and more...?)1 version - Latest release: over 2 years ago - 1 dependent repositories - 20 downloads last month - 4 maintainers
smlmvis 0.1.0
Superresolution visualization of 3D protein localization data from a range of microscopes6 versions - Latest release: 11 months ago - 1 dependent repositories - 34 downloads last month - 5 stars on GitHub - 2 maintainers
bioio-imageio 1.0.0
A BioIO reader plugin for reading simple image formats using imageio.2 versions - Latest release: 5 months ago - 34 downloads last month - 0 stars on GitHub - 2 maintainers
qpformat 0.14.4
library for opening quantitative phase imaging data47 versions - Latest release: over 1 year ago - 1 dependent repositories - 392 downloads last month - 1 stars on GitHub - 2 maintainers
bioio-tiff-glob 1.0.0
A BioIo reader for reading Tiff Glob images2 versions - Latest release: 5 months ago - 39 downloads last month - 0 stars on GitHub - 2 maintainers
Top 4.6% on pypi.org
19 versions - Latest release: 2 months ago - 6 dependent packages - 26 dependent repositories - 2.9 thousand downloads last month - 54 stars on GitHub - 4 maintainers
ncempy 1.11.1
openNCEM's Python Package19 versions - Latest release: 2 months ago - 6 dependent packages - 26 dependent repositories - 2.9 thousand downloads last month - 54 stars on GitHub - 4 maintainers
pyrastitcher 0.0.1
Provides a Python interface to the Terastitcher program.1 version - Latest release: about 8 years ago - 2 dependent repositories - 10 downloads last month - 1 stars on GitHub - 2 maintainers
cytominer-database 0.3.4
A package for storing morphological profiling data.11 versions - Latest release: almost 3 years ago - 1 dependent package - 1 dependent repositories - 611 downloads last month - 9 stars on GitHub - 5 maintainers
bioio-nd2 1.0.0
A BioIO reader plugin for reading ND2 images.2 versions - Latest release: 5 months ago - 360 downloads last month - 0 stars on GitHub - 2 maintainers
napari-aicsimageio 0.7.2
AICSImageIO bindings for napari19 versions - Latest release: over 1 year ago - 6 dependent packages - 1 dependent repositories - 497 downloads last month - 33 stars on GitHub - 2 maintainers
microimage 2.3.1
Python module to open common types of image used in microscopy.1 version - Latest release: about 3 years ago - 1 dependent repositories - 5 downloads last month - 0 stars on GitHub - 2 maintainers
Top 8.0% on pypi.org
18 versions - Latest release: over 7 years ago - 1 dependent package - 6 dependent repositories - 354 downloads last month - 6 maintainers
sima 1.3.2
Software for analysis of sequential imaging data18 versions - Latest release: over 7 years ago - 1 dependent package - 6 dependent repositories - 354 downloads last month - 6 maintainers
cell-tracking-bc 2024.1 💰
Base Classes for Cell Tracking in Microscopy89 versions - Latest release: 3 months ago - 739 downloads last month - 6,321 stars on GitHub - 1 maintainer
nellie 0.1.8
Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cel...8 versions - Latest release: 10 days ago - 339 downloads last month - 26 stars on GitHub - 2 maintainers
Top 6.3% on pypi.org
26 versions - Latest release: 4 months ago - 3 dependent packages - 2 dependent repositories - 2.2 thousand downloads last month - 140 stars on GitHub - 6 maintainers
pyxem 0.17.0
multi-dimensional diffraction microscopy26 versions - Latest release: 4 months ago - 3 dependent packages - 2 dependent repositories - 2.2 thousand downloads last month - 140 stars on GitHub - 6 maintainers
fastddm 0.3.10
A Python/C++ library for the analysis of Differential Dynamic Microscopy experiments5 versions - Latest release: about 1 month ago - 1.32 thousand downloads last month - 2 stars on GitHub - 2 maintainers
brainreg 1.0.8
Automated multi-atlas whole-brain microscopy registration44 versions - Latest release: 3 days ago - 5 dependent packages - 1 dependent repositories - 1.27 thousand downloads last month - 108 stars on GitHub - 4 maintainers
bioio-tifffile 1.0.0
A BioIO reader plugin for reading TIFFs using Tifffile2 versions - Latest release: 5 months ago - 586 downloads last month - 0 stars on GitHub - 2 maintainers
utoolbox 0.6.7
Metapackage for uToolbox, a Python image processing package for LLSM.79 versions - Latest release: almost 4 years ago - 1 dependent repositories - 391 downloads last month - 0 stars on GitHub - 2 maintainers
bioio-base 1.0.0
Typing, base classes, and more for BioIO projects.6 versions - Latest release: 5 months ago - 13 dependent packages - 1 dependent repositories - 6.31 thousand downloads last month - 0 stars on GitHub - 2 maintainers
minerva-lib 0.0.5
Minerva Python library4 versions - Latest release: over 3 years ago - 1 dependent repositories - 43 downloads last month - 2 stars on GitHub - 2 maintainers
bioio 1.0.1
Image reading, metadata management, and image writing for Microscopy images in Python4 versions - Latest release: about 1 month ago - 285 downloads last month - 16 stars on GitHub - 3 maintainers
bioio-czi 1.0.0
A Bioio reader plugin for reading czi images.2 versions - Latest release: 5 months ago - 592 downloads last month - 0 stars on GitHub - 2 maintainers
geome 0.0.2
Geometric Learning for Genome Data2 versions - Latest release: 10 months ago - 2 dependent repositories - 20 downloads last month - 15 stars on GitHub - 6 maintainers
brainglobe-atlasapi 2.0.5
A lightweight python module to interact with and generate atlases for systems neuroscience.6 versions - Latest release: 28 days ago - 4.16 thousand downloads last month - 112 stars on GitHub - 5 maintainers
fpd-live-imaging 0.0.4
Library for live processing and visualization of STEM data acquired using a fast pixelated detector1 version - Latest release: over 6 years ago - 1 dependent repositories - 20 downloads last month - 4 stars on GitLab.com - 2 maintainers
qpsphere 0.5.9
library for analyzing spherical objects in phase imaging28 versions - Latest release: about 2 years ago - 2 dependent repositories - 310 downloads last month - 4 stars on GitHub - 4 maintainers
qpimage 0.9.2
library for manipulating quantitative phase images46 versions - Latest release: 7 months ago - 1 dependent package - 6 dependent repositories - 503 downloads last month - 0 stars on GitHub - 4 maintainers
drymass 0.12.0
manipulation and analysis of phase microscopy data41 versions - Latest release: about 2 years ago - 1 dependent repositories - 307 downloads last month - 2 stars on GitHub - 4 maintainers
bioio-dv 1.0.0
A BioIO reader plugin for reading Digital Video (DV) files.2 versions - Latest release: 5 months ago - 31 downloads last month - 0 stars on GitHub - 2 maintainers
bioio-lif 1.0.0
A BioIO reader plugin for reading LIF (Leica Image File) images.2 versions - Latest release: 5 months ago - 587 downloads last month - 0 stars on GitHub - 2 maintainers
bioio-bioformats 1.0.0
A BioIO reader for reading bioformats formatted images.2 versions - Latest release: 5 months ago - 4.34 thousand downloads last month - 0 stars on GitHub - 2 maintainers
jicbioimage.illustrate 0.6.1
Python package providing a set of tools for creating annotated images and illustrations.10 versions - Latest release: over 7 years ago - 3 dependent repositories - 38 downloads last month - 0 stars on GitHub - 2 maintainers
bioio-ome-tiled-tiff 1.0.0
A BioIO reader plugin for reading tiled ome.tiff images.2 versions - Latest release: 5 months ago - 38 downloads last month - 0 stars on GitHub - 2 maintainers
pco 2.1.2
This class provides methods for using pco cameras.10 versions - Latest release: 2 months ago - 1 dependent package - 1 dependent repositories - 499 downloads last month - 1 maintainer
impose 0.4.6
Fit and superimpose shapes from different imaging modalities17 versions - Latest release: 8 months ago - 3 dependent repositories - 141 downloads last month - 1 stars on GitHub - 4 maintainers
nfinder 0.3
Automatic inference of neighboring cells based on their Delaunay triangulation.3 versions - Latest release: about 2 years ago - 1 dependent repositories - 17 downloads last month - 2 stars on GitHub - 2 maintainers
inpystem 0.1.1
A python library for STEM acquisition inpainting.5 versions - Latest release: about 4 years ago - 54 downloads last month - 4 stars on GitHub - 2 maintainers
magali 0.0.post13
Modelling and inversion of magnetic microscopy data1 version - Latest release: about 1 year ago - 9 downloads last month - 2 stars on GitHub - 2 maintainers
spiepy 0.2.1
SPIEPy (Scanning Probe Image Enchanter using Python) is a Python library to improve automatic pro...5 versions - Latest release: 5 months ago - 1 dependent repositories - 52 downloads last month - 2 maintainers
fpd-data-processing 0.2.1
Library for processing scanning transmission electron microscopy data acquired using a fast pixel...2 versions - Latest release: about 6 years ago - 1 dependent repositories - 20 downloads last month - 2 maintainers
multi-locus-analysis 0.1.0
Utilities for analyzing particle trajectories15 versions - Latest release: about 3 years ago - 1 dependent repositories - 49 downloads last month - 0 stars on GitHub - 2 maintainers
Top 6.6% on pypi.org
25 versions - Latest release: 6 months ago - 2 dependent packages - 3 dependent repositories - 644 downloads last month - 105 stars on GitHub - 3 maintainers
libertem 0.13.1
Open pixelated STEM framework25 versions - Latest release: 6 months ago - 2 dependent packages - 3 dependent repositories - 644 downloads last month - 105 stars on GitHub - 3 maintainers
brainatlas-api 0.0.2rc0
A lightweight python module to interact with atlases for systems neuroscience4 versions - Latest release: almost 4 years ago - 1 dependent repositories - 32 downloads last month - 112 stars on GitHub - 6 maintainers
napari-psf-analysis 1.1.3
A plugin to analyse point spread functions (PSFs).16 versions - Latest release: 8 days ago - 1 dependent repositories - 147 downloads last month - 7 stars on GitHub - 1 maintainer
microfpga 3.1.2
FPGA-based platform for the electronic control of microscopes.3 versions - Latest release: about 1 year ago - 25 downloads last month - 5 stars on GitHub - 2 maintainers
pyhmsa-tiff 0.1.0
UNKNOWN1 version - Latest release: about 8 years ago - 1 dependent repositories - 10 downloads last month - 0 stars on GitHub - 2 maintainers
utoolbox-core 0.0.22
Core functions for uToolbox.49 versions - Latest release: almost 4 years ago - 2 dependent repositories - 274 downloads last month - 3 stars on GitHub - 2 maintainers
Top 9.4% on pypi.org
86 versions - Latest release: 9 months ago - 2 dependent packages - 1 dependent repositories - 423 downloads last month - 250 stars on GitHub - 2 maintainers
pycroscopy 0.63.2
Python library for scientific analysis of microscopy data86 versions - Latest release: 9 months ago - 2 dependent packages - 1 dependent repositories - 423 downloads last month - 250 stars on GitHub - 2 maintainers
microjson 0.1.11
MicroJSON is a library for validating, parsing, and manipulating MicroJSON data.7 versions - Latest release: 7 days ago - 41 downloads last month - 4 maintainers
Top 4.6% on pypi.org
71 versions - Latest release: 7 days ago - 8 dependent packages - 4 dependent repositories - 2.42 thousand downloads last month - 196 stars on GitHub - 1 maintainer
pyclesperanto-prototype 0.24.3
GPU-accelerated image processing in python using OpenCL71 versions - Latest release: 7 days ago - 8 dependent packages - 4 dependent repositories - 2.42 thousand downloads last month - 196 stars on GitHub - 1 maintainer
clesperanto 0.1.3
A graphical user interface for clesperanto based on napari4 versions - Latest release: over 2 years ago - 1 dependent repositories - 49 downloads last month - 196 stars on GitHub - 1 maintainer
fpd 0.2.5
FPD: Fast pixelated detector data storage, analysis and visualisation.20 versions - Latest release: almost 2 years ago - 2 dependent repositories - 135 downloads last month - 9 stars on GitLab.com - 2 maintainers
microscopemetrics-omero 0.2.0
A package to compute metrics on OMERO images using micrsocope-metrics1 version - Latest release: 9 months ago - 9 downloads last month - 2 maintainers
bioio-sldy 1.0.1
A BioIO reader plugin for reading 3i slidebook (SLDY) images.4 versions - Latest release: about 1 month ago - 299 downloads last month - 0 stars on GitHub - 4 maintainers
pylo 1.0.0
A python program to record image series with Lorentz-TEM.1 version - Latest release: almost 3 years ago - 3 dependent repositories - 42 downloads last month - 1 stars on GitHub - 1 maintainer
palom 2024.4.1
Piecewise alignment for layers of mosaics21 versions - Latest release: 8 days ago - 1 dependent package - 1 dependent repositories - 177 downloads last month - 16 stars on GitHub - 2 maintainers
pyhmsa 0.2.0
Python implementation of the MSA / MAS / AMAS Hyper-Dimensional Data File specification10 versions - Latest release: about 5 years ago - 2 dependent repositories - 102 downloads last month - 2 stars on GitHub - 2 maintainers
instrumentools 0.1.3
Data processing and plotting scripts for chemistry workflows1 version - Latest release: over 3 years ago - 1 dependent repositories - 9 downloads last month - 3 stars on GitHub - 2 maintainers
pymontecarlo-casino2 1.1.0
Python interface for Monte Carlo simulation program Casino 23 versions - Latest release: over 2 years ago - 1 dependent repositories - 35 downloads last month - 20 stars on GitHub - 2 maintainers
radiantkit 0.0.1
Radial Image Analysis Toolkit1 version - Latest release: about 5 years ago - 1 dependent repositories - 12 downloads last month - 2 stars on GitHub - 2 maintainers
nd2file 0.0.1.dev2
Access Nikon NIS-Elements ND2 files2 versions - Latest release: about 4 years ago - 2 dependent packages - 1 dependent repositories - 29 downloads last month - 0 stars on GitHub - 2 maintainers
pyspacell 0.1.5
A Python package for single cell spatial image analysis6 versions - Latest release: over 4 years ago - 1 dependent repositories - 19 downloads last month - 18 stars on GitHub - 2 maintainers
boss-ingest 0.12.0
Ingest client for the Boss17 versions - Latest release: about 3 years ago - 1 dependent repositories - 130 downloads last month - 5 stars on GitHub - 4 maintainers
basicpy 1.1.0
A python package for background and shading correction of optical microscopy images7 versions - Latest release: about 1 year ago - 1 dependent package - 1 dependent repositories - 483 downloads last month - 53 stars on GitHub - 3 maintainers
anasyspythontools 0.4.1
A suite of Python tools for use with Analysis Studio AFM-IR files.4 versions - Latest release: over 1 year ago - 34 downloads last month - 1 stars on GitHub - 2 maintainers
Top 3.1% on pypi.org
70 versions - Latest release: 6 months ago - 31 dependent packages - 30 dependent repositories - 17.3 thousand downloads last month - 190 stars on GitHub - 1 maintainer
aicsimageio 4.14.0
Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Pure Python70 versions - Latest release: 6 months ago - 31 dependent packages - 30 dependent repositories - 17.3 thousand downloads last month - 190 stars on GitHub - 1 maintainer
Related Keywords
python
54
image-processing
24
dask
16
image-analysis
16
scientific-formats
16
segmentation
15
image-metadata
15
scientific-computing
15
xarray
14
data analysis
14
imaging
13
bioio
13
neuroscience
13
electron-microscopy
12
STEM
11
brain
10
electron microscopy
10
hyperspy
9
fluorescence
9
electron
9
registration
9
image
9
biology
9
deep-learning
9
spectroscopy
8
analysis
8
numpy
8
image analysis
8
TEM
7
microanalysis
7
multi-dimensional
7
napari
7
materials-science
7
connectomics
6
holography
6
scanning
6
microscopy-images
6
x-ray-spectroscopy
6
microscope
6
quantitative-phase-imaging
5
quantitative phase imaging
5
digital holographic microscopy
5
data-analysis
5
pytorch
5
hyperspy-extension
5
database
5
atlases
5
spatial
5
EM
5
hyperspectral
5
digital-pathology
5
machine-learning
5
file
4
hmsa
4
medical-imaging
4
electron energy loss spectroscopy
4
gpu
4
cuda
4
gui
4
cell
4
diffraction
4
cells
4
SPM
4
visualisation
4
fluorescence-microscopy-imaging
4
scipy
4
connectome
4
physical-sciences
4
calcium
4
x-ray
4
data-visualization
4
tiff
4
scientific
4
format
4
optics
3
refractive index
3
visualization
3
scattering
3
napari-plugin
3
python3
3
probe
3
statistics
3
micro-manager
3
physics
3
computer-vision
3
deep learning
3
boss
3
image-data
3
stitching
3
nvidia
3
multidimensional-image-processing
3
model
3
nd2
3
nikon
3
nis-elements
3
protein
3
psf
3
metadata
3
bioimage-analysis
3
eels
3