Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "parameter-estimation" keyword
opty 1.2.0
Tools for optimizing dynamic systems using direct collocation.6 versions - Latest release: 6 months ago - 1 dependent repositories - 27 downloads last month - 83 stars on GitHub - 1 maintainer
Top 4.4% on pypi.org
110 versions - Latest release: 13 days ago - 5 dependent packages - 13 dependent repositories - 2.14 thousand downloads last month - 106 stars on GitHub - 2 maintainers
amici 0.25.0
Advanced multi-language Interface to CVODES and IDAS110 versions - Latest release: 13 days ago - 5 dependent packages - 13 dependent repositories - 2.14 thousand downloads last month - 106 stars on GitHub - 2 maintainers
petabtests 0.0.1
PEtab testsuite library7 versions - Latest release: 11 months ago - 2 dependent packages - 1 dependent repositories - 40 downloads last month - 5 stars on GitHub - 2 maintainers
welltestpy 1.2.0
welltestpy - package to handle well-based Field-campaigns.15 versions - Latest release: about 1 year ago - 1 dependent repositories - 177 downloads last month - 33 stars on GitHub - 3 maintainers
Top 4.5% on pypi.org
4 versions - Latest release: 10 months ago - 3 dependent packages - 11 dependent repositories - 12.8 thousand downloads last month - 206 stars on GitHub - 2 maintainers
pints 0.5.0
Probabilistic Inference in Noisy Time-Series4 versions - Latest release: 10 months ago - 3 dependent packages - 11 dependent repositories - 12.8 thousand downloads last month - 206 stars on GitHub - 2 maintainers
Top 1.0% on pypi.org
41 versions - Latest release: 3 months ago - 56 dependent packages - 384 dependent repositories - 181 thousand downloads last month - 1,569 stars on GitHub - 1 maintainer
casadi 3.6.5
CasADi -- framework for algorithmic differentiation and numeric optimization41 versions - Latest release: 3 months ago - 56 dependent packages - 384 dependent repositories - 181 thousand downloads last month - 1,569 stars on GitHub - 1 maintainer
cil-estimator 0.1.0
Python package for parameter estimation of random data4 versions - Latest release: over 1 year ago - 35 downloads last month - 0 stars on GitHub - 1 maintainer
ecdf-estimator 0.1.7
Python package for parameter estimation of random data8 versions - Latest release: about 1 month ago - 148 downloads last month - 0 stars on GitHub - 1 maintainer
Top 4.6% on pypi.org
30 versions - Latest release: 6 months ago - 4 dependent packages - 14 dependent repositories - 2.08 thousand downloads last month - 528 stars on GitHub - 4 maintainers
sbi 0.22.0
Simulation-based inference.30 versions - Latest release: 6 months ago - 4 dependent packages - 14 dependent repositories - 2.08 thousand downloads last month - 528 stars on GitHub - 4 maintainers
Top 7.3% on pypi.org
41 versions - Latest release: about 1 month ago - 2 dependent packages - 3 dependent repositories - 621 downloads last month - 180 stars on GitHub - 3 maintainers
pypesto 0.5.1
python-based Parameter EStimation TOolbox41 versions - Latest release: about 1 month ago - 2 dependent packages - 3 dependent repositories - 621 downloads last month - 180 stars on GitHub - 3 maintainers
memocell 0.1.5
Bayesian inference of stochastic cellular processes with and without memory in Python.5 versions - Latest release: 6 months ago - 1 dependent repositories - 51 downloads last month - 1 stars on GitHub - 1 maintainer
Top 6.8% on pypi.org
58 versions - Latest release: 3 months ago - 7 dependent packages - 14 dependent repositories - 5.64 thousand downloads last month - 14 stars on GitHub - 2 maintainers
petab 0.2.9
Parameter estimation tabular data58 versions - Latest release: 3 months ago - 7 dependent packages - 14 dependent repositories - 5.64 thousand downloads last month - 14 stars on GitHub - 2 maintainers
pycotools 1.0.10
A python toolbox for COPASI106 versions - Latest release: almost 5 years ago - 4 dependent repositories - 477 downloads last month - 7 stars on GitHub - 1 maintainer
Top 9.8% on pypi.org
16 versions - Latest release: 7 days ago - 3 dependent repositories - 144 downloads last month - 12 stars on GitHub - 1 maintainer
psweep 0.13.0
loop like a pro, make parameter studies fun16 versions - Latest release: 7 days ago - 3 dependent repositories - 144 downloads last month - 12 stars on GitHub - 1 maintainer
bayesflow 1.1.6
"Amortizing Bayesian Inference With Neural Networks"6 versions - Latest release: 2 months ago - 1 dependent repositories - 211 downloads last month - 254 stars on GitHub - 1 maintainer
tsblender 103.2.0
Drop-in replacement for TSPROC that is a utility for inverse modeling with PEST.18 versions - Latest release: about 2 months ago - 1 dependent repositories - 148 downloads last month - 1 maintainer
tdseird 0.0.2
Time-dependent SEIRD Model2 versions - Latest release: almost 3 years ago - 1 dependent repositories - 21 downloads last month - 5 stars on GitHub - 1 maintainer
swyft 0.4.5
Universal scalable simulation-based inference with TMNRE (Truncated Marginal Neural Ratio Estimat...21 versions - Latest release: 8 months ago - 1 dependent repositories - 205 downloads last month - 151 stars on GitHub - 2 maintainers
sbpipe 4.21.0
Pipelines for systems modelling of biological networks.5 versions - Latest release: almost 6 years ago - 1 dependent repositories - 27 downloads last month - 1 stars on GitHub - 1 maintainer
remu 0.8.0
Response Matrix Utilities for likelihood calculations and hypothesis testing8 versions - Latest release: 12 months ago - 1 dependent repositories - 62 downloads last month - 3 stars on GitHub - 1 maintainer
peuqse 1.2.6
This is the PEUQSE package which stands for Chemical Kinetics Parameter Estimation and Uncertaint...23 versions - Latest release: over 1 year ago - 1 dependent repositories - 177 downloads last month - 13 stars on GitHub - 2 maintainers
petabvis 0.0.2
Interactive visualization of PEtab problems2 versions - Latest release: about 3 years ago - 1 dependent repositories - 20 downloads last month - 7 stars on GitHub - 2 maintainers
modestpy 0.1.1
FMI-compliant model identification package10 versions - Latest release: almost 2 years ago - 1 dependent repositories - 63 downloads last month - 46 stars on GitHub - 1 maintainer
imate 0.25.2
Implicit Matrix Trace Estimator. Computes the trace of functions of implicit matrices. Accelerate...60 versions - Latest release: 4 months ago - 2 dependent packages - 3 dependent repositories - 1.1 thousand downloads last month - 3 stars on GitHub - 1 maintainer
heavytailed 1.0.3
Perform distribution analysis on heavy-tailed distributed data1 version - Latest release: over 4 years ago - 1 dependent repositories - 5 downloads last month - 2 stars on GitHub - 1 maintainer
gleipnir-ns 0.25.0
Python toolkit for Nested Sampling.1 version - Latest release: almost 5 years ago - 1 dependent repositories - 15 downloads last month - 2 stars on GitHub - 1 maintainer
dataconsistent 0.0.1
Computational Advancements in Data-Consistent Inversion1 version - Latest release: almost 4 years ago - 1 dependent repositories - 21 downloads last month - 1 stars on GitHub - 1 maintainer
coexist 0.3.2
Learning simulation parameters from experimental data, from the micro to the macro, from the lapt...4 versions - Latest release: 12 months ago - 1 dependent repositories - 20 downloads last month - 13 stars on GitHub - 1 maintainer
chekipeuq 0.9.8
This is the CheKiPEUQ package which stands for Chemical Kinetics Parameter Estimation and Uncerta...45 versions - Latest release: over 2 years ago - 341 downloads last month - 13 stars on GitHub - 2 maintainers
apexmf 0.4.0
apexmf is a set of python modules for APEX-MODFLOW model evaluation and parameter estimation.24 versions - Latest release: about 1 year ago - 1 dependent repositories - 193 downloads last month - 1 stars on GitHub - 1 maintainer
benchmark-models-petab 0.0.0a1 removed
A collection of models with experimental data in the PEtab format1 version - Latest release: almost 2 years ago - 19 stars on GitHub
galibrate 0.4.2
Python toolkit for continuous Genetic Algorithm optimization.3 versions - Latest release: almost 5 years ago - 1 dependent repositories - 28 downloads last month - 8 stars on GitHub - 1 maintainer
pycotools3 2.1.22
A python toolbox for COPASI27 versions - Latest release: over 4 years ago - 4 dependent repositories - 37 downloads last month - 13 stars on GitHub - 1 maintainer
lim-sample 2.2.0
Package for the SAMPLE method39 versions - Latest release: about 1 year ago - 1 dependent repositories - 126 downloads last month - 5 stars on GitHub - 1 maintainer
biomass 0.13.0
A Python Framework for Modeling and Analysis of Signaling Systems30 versions - Latest release: about 1 month ago - 1 dependent package - 3 dependent repositories - 415 downloads last month - 24 stars on GitHub - 1 maintainer
madys 1.3.0
Manifold Age Determination for Young Stars12 versions - Latest release: 23 days ago - 1 dependent repositories - 121 downloads last month - 5 stars on GitHub - 2 maintainers
Related Keywords
python
17
systems-biology
8
optimization
7
bayesian-inference
5
petab
5
bayesian-methods
4
simulation
4
systems biology
4
python3
3
hacktoberfest
3
sbml
3
model-selection
3
ode
3
modelling
3
nested-sampling
2
genetic-algorithm
2
systemsbiology
2
inverse-problems
2
bayesian-optimization
2
bayesian-statistics
2
profile likelihood
2
identifiability analysis
2
copasi
2
networks
2
biological
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modeling
2
uncertainty-quantification
2
likelihood-free-inference
2
kinetic-modeling
2
machine-learning
2
pytorch
2
simulation-based-inference
2
optimal-control
2
model-comparison
2
dynamical-systems
2
biological-modeling
2
pysb
2
fmi
1
APEX-MODFLOW
1
matrix-computations
1
fmu
1
model
1
identification
1
estimation
1
pattern-search
1
baseflow
1
cli-app
1
hydrology
1
time-series
1
tsproc
1
covid-19
1
infectious-disease-models
1
seird-model
1
marginal-neural-ratio-estimation
1
neural-ratio-estimation
1
truncated-neural-ratio-estimation
1
conda
1
pipeline
1
binning
1
hypothesis-testing
1
likelihood
1
markov-chain
1
response-matrix
1
smearing-matrix
1
visualization
1
PEST
1
apex
1
apex-modflow
1
modflow
1
benchmarking
1
model-calibration
1
optimizer
1
ode-models
1
profile-likelihood
1
audio-analysis
1
physical-modeling
1
biochemical-networks
1
computational-biology
1
network-analysis
1
ordinary-differential-equations
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systems-biology-simulation
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astronomy
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direct-imaging
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sql
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stellar-astrophysics
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matrix-inverse
1
interpolation-techniques
1
cholesky-decomposition
1
randomized-algorithms
1
lanczos-iteration
1
radial-basis-function
1
polynomial-bases
1
orthogonal-polynomials
1
cross-validation
1
linear-algebra
1
heavy-tailed
1
distribution analysis
1
distribution-analysis
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long-tail
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