Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

Top 1.1% on pypi.org
Top 1.7% downloads on pypi.org
Top 0.2% dependent packages on pypi.org
Top 1.0% dependent repos on pypi.org
Top 1.5% docker downloads on pypi.org

pypi.org : itk

ITK is an open-source toolkit for multidimensional image analysis

Registry - Source - Homepage - Documentation - JSON
purl: pkg:pypi/itk
Keywords: ITK, InsightToolkit, scientific, medical, image, imaging, cpp, hacktoberfest, image-analysis, insight-toolkit, itk, medical-imaging, numfocus, open-science, open-source, python, reproducible-research, scientific-computing
License: Apache-2.0
Latest release: over 1 year ago
First release: almost 7 years ago
Dependent packages: 83
Dependent repositories: 220
Downloads: 39,820 last month
Stars: 1,336 on GitHub
Forks: 647 on GitHub
Docker dependents: 30
Docker downloads: 6,080
Total Commits: 46503
Committers: 449
Average commits per author: 103.57
Development Distribution Score (DDS): 0.8
More commit stats: commits.ecosyste.ms
See more repository details: repos.ecosyste.ms
Funding links: https://github.com/sponsors/numfocus, https://opencollective.com/itk
Last synced: about 10 hours ago

shapeaxi 0.9.3
Shape Analysis Exploration and Interpretability
59 versions - Latest release: 20 days ago - 1.27 thousand downloads last month - 2 stars on GitHub - 2 maintainers
mirp 2.2.2
A package for standardised processing of medical imaging and computation of quantitative features.
7 versions - Latest release: 20 days ago - 1 dependent package - 280 downloads last month - 35 stars on GitHub - 1 maintainer
napari-cellseg3d 0.2.0
Plugin for cell segmentation in 3D
15 versions - Latest release: 22 days ago - 139 downloads last month - 33 stars on GitHub - 2 maintainers
Top 2.3% on pypi.org
monai-weekly 1.4.dev2419
AI Toolkit for Healthcare Imaging
184 versions - Latest release: 24 days ago - 6 dependent packages - 21 dependent repositories - 9.27 thousand downloads last month - 5,404 stars on GitHub - 1 maintainer
napari-3dtimereg 0.0.5 💰
Registration of 3D movies applied to all channels
4 versions - Latest release: 29 days ago - 161 downloads last month - 2,045 stars on GitHub - 1 maintainer
dcm-classifier 0.9.1
This is a consolidation of work from NAMIC efforts primarily at the University of Iowa.
43 versions - Latest release: about 1 month ago - 962 downloads last month - 1 stars on GitHub - 3 maintainers
fredtools 0.7.22
FRED tools is a collection of python functions for image manipulation and analysis. See more on h...
67 versions - Latest release: about 1 month ago - 1 dependent package - 265 downloads last month - 6 stars on GitHub - 1 maintainer
imagedata 3.5.4
Read/write medical image data
116 versions - Latest release: about 1 month ago - 4 dependent packages - 2 dependent repositories - 1.17 thousand downloads last month - 9 stars on GitHub - 1 maintainer
nitrain-image 0.1.1
A numpy-like library for medical images in Python
1 version - Latest release: about 1 month ago - 1 dependent package - 205 downloads last month - 1 stars on GitHub - 1 maintainer
mipkit 1.6.4
mipkit
28 versions - Latest release: about 1 month ago - 1 dependent repositories - 35 downloads last month - 7 stars on GitHub - 1 maintainer
itk-montage 0.8.2
Montaging for microscopy imaging files.
13 versions - Latest release: about 1 month ago - 1 dependent repositories - 931 downloads last month - 24 stars on GitHub - 4 maintainers
Top 3.4% on pypi.org
itk-elastix 0.19.2
Provides an ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images
35 versions - Latest release: about 1 month ago - 13 dependent packages - 11 dependent repositories - 7.85 thousand downloads last month - 184 stars on GitHub - 3 maintainers
Top 1.1% on pypi.org
imageio 2.34.1 💰
Library for reading and writing a wide range of image, video, scientific, and volumetric data for...
91 versions - Latest release: about 1 month ago - 847 dependent packages - 26,152 dependent repositories - 22 million downloads last month - 1,424 stars on GitHub - 2 maintainers
itk-webassemblyinterface 1.0b173
IO with the itk-wasm file formats
4 versions - Latest release: about 2 months ago - 1.41 thousand downloads last month - 179 stars on GitHub - 1 maintainer
magellanmapper 1.6b4
3D atlas analysis and annotation
3 versions - Latest release: about 2 months ago - 17 downloads last month - 20 stars on GitHub - 1 maintainer
foundation-cancer-image-biomarker 1.0.0
Official repo for Foundation Models for Quantitative Biomarker Discovery in Cancer Imaging [INSER...
42 versions - Latest release: 2 months ago - 628 downloads last month - 51 stars on GitHub - 1 maintainer
icon-registration 1.1.4
A package for image registration regularized by inverse consistency
14 versions - Latest release: 3 months ago - 1 dependent package - 1 dependent repositories - 231 downloads last month - 30 stars on GitHub - 1 maintainer
pyplastimatch 0.4.5
Basic Python wrapper for Plastimatch
7 versions - Latest release: 3 months ago - 2 dependent repositories - 146 downloads last month - 9 stars on GitHub - 2 maintainers
track2p 2.0.0
Cell tracking for longitudinal calcium imaging recordings.
26 versions - Latest release: 4 months ago - 727 downloads last month - 8 stars on GitHub - 2 maintainers
cell-tracking-bc 2024.1 💰
Base Classes for Cell Tracking in Microscopy
89 versions - Latest release: 4 months ago - 208 downloads last month - 6,321 stars on GitHub - 1 maintainer
itk-ants 0.2.0
Advanced Normalization Tools in WebAssembly
6 versions - Latest release: 4 months ago - 828 downloads last month - 0 stars on GitHub - 2 maintainers
medlab 2024.2.3
medical deep learning toolkit
21 versions - Latest release: 4 months ago - 42 downloads last month - 1 maintainer
itk-tubetk 1.3.6
An open-source toolkit, led by Kitware, Inc., for the segmentation, registration, and analysis of...
16 versions - Latest release: 5 months ago - 2 dependent repositories - 595 downloads last month - 40 stars on GitHub - 2 maintainers
itk-growcut 0.2.1
Segments a 3D image from foreground and background seeds.
4 versions - Latest release: 7 months ago - 1 dependent repositories - 152 downloads last month - 14 stars on GitHub - 3 maintainers
itk-dreg 0.0.1
ITK-DREG Distributed registration framework.
1 version - Latest release: 7 months ago - 5 downloads last month - 5 stars on GitHub - 1 maintainer
eyepy 0.12.2
A python package to read, analyse and visualize OCT and fundus data form various sources.
4 versions - Latest release: 7 months ago - 1 dependent repositories - 84 downloads last month - 36 stars on GitHub - 1 maintainer
chunky3d 0.1.13
A 3D array-like NumPy-based data structure for large sparsely-populated volumes
17 versions - Latest release: 7 months ago - 160 downloads last month - 7 stars on GitHub - 2 maintainers
itk-ioomezarrngff 0.2.1
IO for images stored in zarr format.
11 versions - Latest release: 7 months ago - 1 dependent package - 416 downloads last month - 8 stars on GitHub - 3 maintainers
itk-genericlabelinterpolator 1.2.1
ITK classes for generic interpolation of label images.
4 versions - Latest release: 7 months ago - 1 dependent repositories - 162 downloads last month - 4 stars on GitHub - 4 maintainers
shapeaxiflo 0.0.3 removed
Shape Analysis Exploration and Interpretability
3 versions - Latest release: 7 months ago - 492 downloads last month - 1 stars on GitHub - 1 maintainer
Top 5.0% on pypi.org
monailabel 0.8.1
Active Learning Toolkit for Healthcare Imaging
50 versions - Latest release: 7 months ago - 4 dependent repositories - 2.35 thousand downloads last month - 554 stars on GitHub - 3 maintainers
Top 4.3% on pypi.org
platipy 0.7.1
Processing Library and Analysis Toolkit for Medical Imaging in Python
19 versions - Latest release: 8 months ago - 3 dependent packages - 9 dependent repositories - 741 downloads last month - 85 stars on GitHub - 1 maintainer
Top 1.1% on pypi.org
monai 1.3.0
AI Toolkit for Healthcare Imaging
86 versions - Latest release: 8 months ago - 48 dependent packages - 269 dependent repositories - 146 thousand downloads last month - 5,404 stars on GitHub - 1 maintainer
Top 6.9% on pypi.org
monailabel-weekly 0.5.dev2340
Active Learning Toolkit for Healthcare Imaging
114 versions - Latest release: 8 months ago - 2 dependent repositories - 832 downloads last month - 554 stars on GitHub - 3 maintainers
itk-rtk-cuda116 2.5.0
The Reconstruction Toolkit (RTK) for fast circular cone-beam CT reconstruction.
3 versions - Latest release: 9 months ago - 119 downloads last month - 233 stars on GitHub - 1 maintainer
itk-rtk 2.5.0
The Reconstruction Toolkit (RTK) for fast circular cone-beam CT reconstruction.
7 versions - Latest release: 9 months ago - 1 dependent repositories - 435 downloads last month - 233 stars on GitHub - 1 maintainer
itk-cudacommon-cuda116 1.0.1
Framework for processing images with Cuda.
3 versions - Latest release: 9 months ago - 1 dependent package - 103 downloads last month - 6 stars on GitHub - 1 maintainer
itk-labelpointset 0.1.0
ITK Module to extract a PointSet from a labeled image
1 version - Latest release: 9 months ago - 15 downloads last month - 0 stars on GitHub - 1 maintainer
itk-ioopenjph 1.0.0
An ITK module to read and write High-throughput JPEG2000 (HTJ2K) images.
2 versions - Latest release: 9 months ago - 98 downloads last month - 2 stars on GitHub - 2 maintainers
itk-isotropicwavelets 0.6.2
Steerable Wavelet Pyramid with Isotropic Wavelets and Riesz Functions
8 versions - Latest release: 10 months ago - 1 dependent repositories - 234 downloads last month - 13 stars on GitHub - 4 maintainers
itk-totalvariation 0.2.3
TotalVariation algorithms, providing a wrap for the external project: https://github.com/albarji/...
5 versions - Latest release: 10 months ago - 1 dependent repositories - 70 downloads last month - 10 stars on GitHub - 3 maintainers
itk-topologycontrol 1.1.0
ITK external module to control topology of binary mask regions
4 versions - Latest release: 10 months ago - 212 downloads last month - 1 stars on GitHub - 1 maintainer
Top 8.3% on pypi.org
itk-ultrasound 0.6.3
Filters for use with the Insight Toolkit (ITK) that may be particularly useful for the reconstruc...
22 versions - Latest release: 11 months ago - 2 dependent repositories - 1.25 thousand downloads last month - 50 stars on GitHub - 4 maintainers
aicssegmentation 0.5.3
Part 1 of Allen Cell and Structure Segmenter
25 versions - Latest release: 12 months ago - 4 dependent packages - 1 dependent repositories - 409 downloads last month - 24 stars on GitHub - 1 maintainer
histomics-stream 2.4.0
Whole-slide image streamer for machine learning frameworks.
22 versions - Latest release: about 1 year ago - 1 dependent repositories - 205 downloads last month - 21 stars on GitHub - 1 maintainer
pyradise 0.2.3
PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-R...
12 versions - Latest release: about 1 year ago - 1 dependent repositories - 87 downloads last month - 37 stars on GitHub - 1 maintainer
imvdb 1.0.0
volumetric image in openvdb format
3 versions - Latest release: about 1 year ago - 3 downloads last month - 1 stars on GitHub - 1 maintainer
vessel-express-napari 0.0.9
A simple plugin for 3D vessel segmentation
2 versions - Latest release: about 1 year ago - 1 dependent repositories - 27 downloads last month - 2 stars on GitHub - 1 maintainer
csc-mlops 0.9.18
An MLOps framework for development of clinical applications
49 versions - Latest release: about 1 year ago - 2 dependent repositories - 824 downloads last month - 9 stars on GitHub - 1 maintainer
eyepie 0.11.3
A python package to read, analyse and visualize OCT and fundus data form various sources.
38 versions - Latest release: about 1 year ago - 1 dependent package - 1 dependent repositories - 308 downloads last month - 36 stars on GitHub - 1 maintainer
ciclope 1.3.5
Computed Tomography to Finite Elements
15 versions - Latest release: about 1 year ago - 1 dependent repositories - 81 downloads last month - 16 stars on GitHub - 1 maintainer
Top 7.2% on pypi.org
gatetools 0.12.1
Python tools for GATE, see https://github.com/OpenGATE/Gate
27 versions - Latest release: about 1 year ago - 3 dependent packages - 4 dependent repositories - 2.55 thousand downloads last month - 30 stars on GitHub - 3 maintainers
pykneer 0.0.6
pyKNEEr: An image analysis workflow for open and reproducible research on femoral knee cartilage
7 versions - Latest release: over 1 year ago - 1 dependent repositories - 47 downloads last month - 32 stars on GitHub - 1 maintainer
itk-parabolicmorphology 1.2.1
ITK classes for mathematical morphology using parabolic structuring functions
4 versions - Latest release: over 1 year ago - 1 dependent repositories - 167 downloads last month - 3 stars on GitHub - 4 maintainers
itk-cleaver 1.3.1
An ITK interface to the Cleaver multi-material tetrahedral meshing library
8 versions - Latest release: over 1 year ago - 1 dependent repositories - 248 downloads last month - 4 stars on GitHub - 3 maintainers
itk-labelerodedilate 1.2.1
An ITK module for erode and dilate operations on label images
3 versions - Latest release: over 1 year ago - 1 dependent repositories - 108 downloads last month - 5 stars on GitHub - 2 maintainers
Top 9.5% on pypi.org
itk-minimalpathextraction 1.2.6
A minimal path extraction framework based on Fast Marching arrival functions.
13 versions - Latest release: over 1 year ago - 1 dependent package - 2 dependent repositories - 501 downloads last month - 25 stars on GitHub - 4 maintainers
opengate 0.7.3
Simulation for Medical Physics
13 versions - Latest release: over 1 year ago - 1 dependent repositories - 503 downloads last month - 37 stars on GitHub - 2 maintainers
cardio 2023.1.2
A simple web-based viewer for 4D ('cine') medical imaging data.
1 version - Latest release: over 1 year ago - 25 downloads last month - 0 stars on GitHub - 1 maintainer
itk-ransac 0.1.4
An ITK-based implementation of RANSAC used for point cloud registration.
5 versions - Latest release: over 1 year ago - 436 downloads last month - 3 stars on GitHub - 2 maintainers
itk-texturefeatures 3.6.0
An ITK module to compute N-dimension grayscale texture feature images
16 versions - Latest release: over 1 year ago - 1 dependent repositories - 389 downloads last month - 22 stars on GitHub - 5 maintainers
itk-spcn 0.2.0
This performs structure preserving color normalization on an image using a reference image.
9 versions - Latest release: over 1 year ago - 2 dependent repositories - 163 downloads last month - 18 stars on GitHub - 1 maintainer
itk-iomeshswc 0.2.0
ITK module for reading meshes from SWC files, a format for representing neuron morphology.
4 versions - Latest release: over 1 year ago - 1 dependent repositories - 102 downloads last month - 1 stars on GitHub - 1 maintainer
itk-iomeshstl 2.3.0
MeshIO class to read and write ITK meshes into STL files.
3 versions - Latest release: over 1 year ago - 1 dependent repositories - 107 downloads last month - 9 stars on GitHub - 4 maintainers
itk-dissolve 1.0.6
This is a module for the Insight Toolkit (ITK) that provides filters to replace regions within a ...
7 versions - Latest release: over 1 year ago - 193 downloads last month - 1 stars on GitHub - 1 maintainer
itk-bonemorphometry 1.4.0
An ITK module to compute bone morphometry features and feature maps
5 versions - Latest release: over 1 year ago - 1 dependent repositories - 121 downloads last month - 7 stars on GitHub - 2 maintainers
itk-thickness3d 5.3.0
An ITK module to compute 3D thickness
6 versions - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 654 downloads last month - 35 stars on GitHub - 3 maintainers
itk-cuberille 2.6.0
This module implements cuberille implicit surface polygonization for ITK.
10 versions - Latest release: over 1 year ago - 1 dependent repositories - 343 downloads last month - 4 stars on GitHub - 4 maintainers
itk-shape 0.3.0
A C++ implementation of Procrustes alignment for 3D meshes.
4 versions - Latest release: over 1 year ago - 1 dependent repositories - 279 downloads last month - 4 stars on GitHub - 1 maintainer
itk-morphologicalcontourinterpolation 1.1.0
Image morphological contour interpolation.
5 versions - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 434 downloads last month - 27 stars on GitHub - 2 maintainers
vmat 0.0.7
virtual medical AI toolkit
7 versions - Latest release: over 1 year ago - 31 downloads last month - 1 maintainer
itk-fpfh 0.1.1
An ITK-based implementation of FPFH (Fast Point Feature Histogram) used for point cloud feature c...
2 versions - Latest release: over 1 year ago - 330 downloads last month - 2 stars on GitHub - 2 maintainers
medio 0.4.2
Medical images I/O Python package
4 versions - Latest release: over 1 year ago - 1 dependent repositories - 351 downloads last month - 32 stars on GitHub - 2 maintainers
itk-vkfft 0.2.0
VkFFT backends for ITK FFT classes.
10 versions - Latest release: over 1 year ago - 1 dependent repositories - 235 downloads last month - 7 stars on GitHub - 4 maintainers
itk-higherorderaccurategradient 1.2.0
ITK filters to estimate higher order accurate derivative and gradients
14 versions - Latest release: over 1 year ago - 1 dependent package - 2 dependent repositories - 431 downloads last month - 1 stars on GitHub - 4 maintainers
itk-strain 0.4.0
ITK filters to estimate a strain tensor field from a displacement field or a spatial transformation
13 versions - Latest release: over 1 year ago - 1 dependent package - 3 dependent repositories - 709 downloads last month - 3 maintainers
itk-ioscanco 0.10.0
An ITK module to read and write Scanco microCT .isq files.
12 versions - Latest release: over 1 year ago - 3 dependent repositories - 482 downloads last month - 9 stars on GitHub - 4 maintainers
itk-bsplinegradient 0.3.0
Approximate an image's gradient from a B-spline fit to its intensity.
12 versions - Latest release: over 1 year ago - 1 dependent package - 2 dependent repositories - 393 downloads last month - 2 stars on GitHub - 4 maintainers
Top 2.8% on pypi.org
itk-meshtopolydata 0.10.0
Convert an ITK Mesh to a simple data structure compatible with vtkPolyData.
30 versions - Latest release: over 1 year ago - 4 dependent packages - 24 dependent repositories - 8.7 thousand downloads last month - 6 stars on GitHub - 2 maintainers
itk-splitcomponents 2.1.0
ITK filters to split a multi-component pixel image into component-wise scalar images
13 versions - Latest release: over 1 year ago - 1 dependent package - 5 dependent repositories - 471 downloads last month - 5 stars on GitHub - 2 maintainers
itk-clesperanto 0.2.2
ITK filters accelerated with OpenCL.
2 versions - Latest release: over 1 year ago - 96 downloads last month - 4 stars on GitHub - 3 maintainers
Top 7.3% on pypi.org
mermaid 0.3.2
Image registration toolbox based on pyTorch
2 versions - Latest release: over 2 years ago - 4 dependent repositories - 845 downloads last month - 171 stars on GitHub - 1 maintainer
garf 0.0.2
Utility tools for GATE ARF simulations
7 versions - Latest release: over 5 years ago - 1 dependent package - 1 dependent repositories - 2.38 thousand downloads last month - 1 stars on GitHub - 2 maintainers