java 395 genetics 191 genomics 167 python 132 biobank 114 catalogue 114 molgenis 114 freemarker 114 javascript 114 lifescience 114 cheminformatics 108 blueobelisk 108 code4lib 81 chemistry 81 open-source 77 data-visualization 77 postgresql 77 biology 77 api 76 clojure 76 clojurescript 76 data-visualisation 76 data-warehouse 76 lgplv3 76 opensource 76 perl 76 tomcat 76 tomcat8 76 webservices 76 scala 71 spark 59 hacktoberfest 57 avro 55 big-data 55 r 55 parquet 55 protein-structure 34 emr 31 uri 30 mysql-backend 30 identifier-mapping 30 bridgedb 30 database 30 ai 29 clinical 29 ctakes 29 ehr 29 healthcare 29 medicine 29 umls 29 ml 29 uima 29 named-entity-recognition 29 nlp 29 temporal-information 29 workflow-engine 29 rdf 27 excel 27 bioclipse 27 aws 21 cloud 19 docker 19 dataflow 18 groovy 18 hello 18 hpc 18 nextflow 18 pipeline 18 pipeline-framework 18 reproducible-research 18 reproducible-science 18 sge 18 singularity 18 singularity-containers 18 slurm 18 chemoinformatics 18 modeling 18 simulation 18 sequence-alignment 17 structural-bioinformatics 16 structure-alignment 16 protein-sequences 16 protein-modification 16 protein-data-bank 16 pdb 16 parser-library 16 machine-learning 12 vcf 12 workflow 11 bigdata 11 architecture 10 cross-engine-execution 10 data-analysis 10 data-management-engine 10 dataset 10 engine 10 engine-configurations 10 gdm 10 gdm-dataset-architecture 10 genometric-query-language 10