bcftools
BCFtools is a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF. All commands work transparently with both VCFs and BCFs, both uncompressed and BGZF- compressed.
Ecosystem
spack.io
spack.io
Latest Release
about 3 years ago
1.15.1
about 3 years ago
Versions
19
19
Dependent Packages
7
7
pgdspider 2.1.1.5
"PGDSpider is a powerful automated data conversion tool for population genetic and genomics prog...2 versions - Latest release: over 2 years ago
Top 5.8% on spack.io
6 versions - Latest release: almost 3 years ago - 4 dependent packages
augustus 3.5.0
AUGUSTUS is a program that predicts genes in eukaryotic genomic sequences6 versions - Latest release: almost 3 years ago - 4 dependent packages
reditools 1.3_2020-03-20
REDItools: python scripts for RNA editing detection by RNA-Seq data. REDItools are simple python ...2 versions - Latest release: almost 4 years ago - 44 stars on GitHub - 1 maintainer
py-vcf-kit 0.1.6
VCF-kit is a command-line based collection of utilities for performing analysis on Variant Call F...1 version - Latest release: almost 4 years ago - 130 stars on GitHub - 1 maintainer
phyluce 1.6.7
phyluce (phy-loo-chee) is a software package that was initially developed for analyzing data coll...1 version - Latest release: almost 4 years ago - 85 stars on GitHub - 1 maintainer
delly2 0.9.1
Delly2 is an integrated structural variant prediction method that can discover, genotype and visu...2 versions - Latest release: almost 4 years ago - 486 stars on GitHub - 1 maintainer
Past Dependents
Include Past Dependents
Check this option to include packages that no longer depend on this package in their latest version but previously did.
Links
| Registry | spack.io |
| Source | Repository |
| JSON API | View JSON |
| CodeMeta | codemeta.json |
Package Details
| PURL |
pkg:spack/bcftools
spec |
| License | Other |
| First Release | almost 4 years ago |
| Last Synced | 2 months ago |
Rankings on spack.io
Overall
Top 3.8%
Dependent packages
Top 7.6%