Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
crates.io "genetics" keyword
genotype 0.1.2
An abstraction layer between genotype and phenotype, with in-place mutation.3 versions - Latest release: almost 6 years ago - 2.16 thousand downloads total - 0 stars on GitHub - 1 maintainer
li-stephens 0.1.0
An implementation of the Li+Stephens model for predicting the likelihood of a test sequence given...1 version - Latest release: almost 2 years ago - 1 dependent package - 1 dependent repositories - 997 downloads total - 0 stars on GitHub - 1 maintainer
seqrepo 0.10.1
Port of (read-only) functionality of biocommons/seqrepo to Rust16 versions - Latest release: 3 months ago - 2 dependent packages - 1 dependent repositories - 12.4 thousand downloads total - 3 stars on GitHub - 1 maintainer
crypt4gh 0.4.1
Encryption and decryption implementation of the Crypt4GH encryption format.12 versions - Latest release: about 2 years ago - 1 dependent package - 1 dependent repositories - 5.65 thousand downloads total - 5 stars on GitHub - 3 maintainers
jean_cut 0.1.0
Codon usage tables feature for jean1 version - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 675 downloads total - 1 stars on GitHub - 1 maintainer
jean_alignment 0.1.0
Sequence alignment feature for jean1 version - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 674 downloads total - 1 stars on GitHub - 1 maintainer
jean_blosum 0.1.0
BLOSUM feature for jean1 version - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 678 downloads total - 1 stars on GitHub - 1 maintainer
mehari 0.25.5
Variant effect prediction all in Rust55 versions - Latest release: 2 months ago - 1 dependent package - 1 dependent repositories - 19 thousand downloads total - 12 stars on GitHub - 1 maintainer
bdb 0.0.1
Efficient APIs to parse from and export to file formats commonly used in biology, for both proteo...1 version - Latest release: over 5 years ago - 837 downloads total - 1 stars on GitHub - 1 maintainer
annonars 0.36.2
Rust template repository67 versions - Latest release: about 1 month ago - 2 dependent packages - 1 dependent repositories - 24.3 thousand downloads total - 5 stars on GitHub - 1 maintainer
jean_core 0.1.0
Core package of jean1 version - Latest release: over 1 year ago - 6 dependent packages - 1 dependent repositories - 2.05 thousand downloads total - 1 stars on GitHub - 1 maintainer
jean_io 0.1.0
I/O library feature for jean1 version - Latest release: over 1 year ago - 2 dependent packages - 1 dependent repositories - 911 downloads total - 1 stars on GitHub - 1 maintainer
jean_macros 0.1.0
Macro library feature for jean1 version - Latest release: over 1 year ago - 1 dependent repositories - 397 downloads total - 0 stars on GitHub - 1 maintainer
varfish-server-worker 0.11.0
Rust-based workers for varfish-server15 versions - Latest release: 3 months ago - 4.65 thousand downloads total - 2 stars on GitHub - 1 maintainer
jean 0.1.0
Computational biology utility library for Rust featuring sequence alignment, genome annotation, a...1 version - Latest release: over 1 year ago - 1 dependent repositories - 415 downloads total - 0 stars on GitHub - 1 maintainer
methylome 0.3.0
Structs and methods for working with methylation data1 version - Latest release: 6 months ago - 3 dependent packages - 611 downloads total - 2 stars on GitHub - 1 maintainer
biocommons-bioutils 0.1.4
(Partial) port of biocommons/bioutils to Rust2 versions - Latest release: 8 months ago - 4 dependent packages - 3.56 thousand downloads total - 0 stars on GitHub - 1 maintainer
pedigree 0.3.0
Build a pedigree from WGS data.1 version - Latest release: 6 months ago - 1 dependent package - 536 downloads total - 2 stars on GitHub - 1 maintainer
progress_bars 0.3.0
Build a pedigree from WGS data.1 version - Latest release: 6 months ago - 3 dependent packages - 629 downloads total - 2 stars on GitHub - 1 maintainer
atglib 0.2.2
A library to handle transcripts for genomics and transcriptomics9 versions - Latest release: 6 months ago - 1 dependent package - 1 dependent repositories - 3.49 thousand downloads total - 0 stars on GitHub - 1 maintainer
viguno 0.2.1
Rust template repository9 versions - Latest release: 4 months ago - 2.53 thousand downloads total - 0 stars on GitHub - 1 maintainer
metaprofile 0.3.0
Segregate WGS data into windows along the genome. Optionally, run tools such as alphabeta for eac...1 version - Latest release: 6 months ago - 327 downloads total - 2 stars on GitHub - 1 maintainer
alphabeta 0.3.0
Tools for analysing epigenetic data.10 versions - Latest release: 6 months ago - 1 dependent package - 2.93 thousand downloads total - 2 stars on GitHub - 1 maintainer
atg 0.8.5
Convert transcripts between different file formats14 versions - Latest release: 2 months ago - 4.82 thousand downloads total - 4 stars on GitHub - 1 maintainer
ppgg 0.1.4
A library and an associated executable, the library provides tools for building tools that can pa...1 version - Latest release: almost 3 years ago - 568 downloads total - 11 stars on GitHub - 1 maintainer
genetic_algorithms 1.3.2
Library for solving genetic algorithm problems28 versions - Latest release: 7 months ago - 7.82 thousand downloads total - 3 stars on GitHub - 1 maintainer
nucleob 1.1.1 💰
bioinformatics: nucleobases and amino acids statistics5 versions - Latest release: over 1 year ago - 1.53 thousand downloads total - 0 stars on GitHub - 1 maintainer
rocksdb-utils-lookup 0.4.0
Utilities for using RocksDB as read-only lookup table (after initial bulk import).4 versions - Latest release: 4 months ago - 3 dependent packages - 1 dependent repositories - 7.27 thousand downloads total - 0 stars on GitHub - 1 maintainer
genomic_interval_pipeline 0.1.3
A pipeline for creating HDF5 databases from genomic intervals.2 versions - Latest release: over 3 years ago - 923 downloads total - 0 stars on GitHub - 1 maintainer
li_stephens_py_hkhan 0.1.1
Python bindings of the li-stevens crate to allow calling the rust code from python2 versions - Latest release: almost 2 years ago - 650 downloads total - 0 stars on GitHub - 1 maintainer
beacon-verifier 0.3.3
Compliance tool to verify beacon implementations.19 versions - Latest release: over 1 year ago - 6.79 thousand downloads total - 2 stars on GitHub - 1 maintainer
genomics
A genomics library for rust focusing on individual genetics, population genetics, and SNPs2 versions - Latest release: 30 days ago - 823 downloads total - 2 stars on GitHub - 1 maintainer
easy_ga 1.2.1
Library to implement genetic algorithms8 versions - Latest release: almost 2 years ago - 2.49 thousand downloads total - 1 stars on GitHub - 1 maintainer
crypt4ghfs 0.3.0
Fuse layer exposing Crypt4GH-encrypted files, as if they were decrypted2 versions - Latest release: about 2 years ago - 792 downloads total - 2 stars on GitHub - 1 maintainer
mutexpect 0.2.7
Utility functions for determining potential point mutations in a genetic sequence and their stati...5 versions - Latest release: over 2 years ago - 2 dependent packages - 2.78 thousand downloads total - 0 stars on GitHub - 1 maintainer
hgvs 0.16.0
Port of biocommons/hgvs to Rust27 versions - Latest release: 3 months ago - 4 dependent packages - 1 dependent repositories - 12.5 thousand downloads total - 8 stars on GitHub - 1 maintainer
kmer-papa 0.3.1
Determine genes with significantly more mutations than expected by chance3 versions - Latest release: almost 2 years ago - 1.09 thousand downloads total - 0 stars on GitHub - 1 maintainer
genovo 0.3.2
Determine genes with significantly more mutations than expected by chance9 versions - Latest release: over 1 year ago - 3.11 thousand downloads total - 0 stars on GitHub - 2 maintainers
Related Keywords
bioinformatics
11
dna
10
biology
10
rna
8
protein
8
varfish
8
variant-filtration
8
variant-prioritization
8
vcf
8
computational-biology
7
genes
7
epigenomics
5
epigenetics
5
epigenetic-data
5
alphabeta
5
genomics
4
rust
4
mutation
3
statistical-model
3
ai
2
encryption
2
transcript
2
transcriptomics
2
crypt4gh
2
c4gh
2
proteomics
2
genetic-algorithm
2
rust-lang
1
rust-library
1
vcf-converter
1
artificial
1
intelligence
1
algorithm
1
intervals
1
hdf5
1
keras
1
deep-learning
1
pythonbindings
1
api
1
validation
1
http
1
jsonschema
1
genetic
1
machine-learning
1
filesystem
1
phenotype
1
genotype
1
cut
1
ga4gh
1
ega-archive
1
codons
1
ega
1
cryptography-tools
1
cryptography
1
sequence
1
alignment
1
matrix
1
blosum
1
scientific
1
fasta
1
gff3
1
crg
1
genome
1
bioinformatics-tool
1
cli-app
1
converter
1
gtf
1
vcf-files
1
protein-sequences
1