Ecosyste.ms: Packages

bioinformatics 7 transcriptomics 4 clustering 4 dimension-reduction 3 single-cell-rna-seq 3 scrna-seq 3 rna-seq 3 cite-seq 2 big-data 2 store 2 python 2 gene-modules 2 genomics 2 graph-analytics 2 memory-efficient 2 multiomics 2 pseudotime 2 gene-set-enrichment 2 scalable-data-analysis 2 scatac-seq 2 single-cell-atac-seq 2 pipeline 2 single-cell-genomics 2 single-cell 2 normalization 2 tsne 2 umap 2 scanpy 1 association-testing 1 recursion 1 k-NN 1 hiearchical-clustering 1 optimal-clusters 1 differential-evolution 1 gene-expression 1 plotting 1 statistics 1 survival-analysis 1 differential-gene-expression 1 reproducibility 1 tensorflow 1 isotope-labeling-experiments 1 metabolomics 1 metabolomics-pipeline 1 causal-inference 1 co-expression 1 gene-regulatory-network 1 hypothesis-testing 1 single-cell-crispr-screening 1 chip-seq 1 ngs 1 differential expression 1 annotation 1 networks 1 enrichr 1 gsea 1 network 1 visualization 1 truncated-normal 1 tn-test 1 anndata 1 pseudobulk 1