Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
Top 3.4% on conda-forge.org
Top 2.8% dependent packages on conda-forge.org
Top 1.2% dependent repos on conda-forge.org
Top 3.3% forks on conda-forge.org
Top 2.8% dependent packages on conda-forge.org
Top 1.2% dependent repos on conda-forge.org
Top 3.3% forks on conda-forge.org
conda-forge.org : biopython
Biopython is a collection of freely available Python tools for computational molecular biology
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purl: pkg:conda/biopython
Keywords: bioinformatics, biopython, dna, genomics, phylogenetics, protein, protein-structure, python, sequence-alignment
License: Other
Latest release: over 1 year ago
First release: almost 6 years ago
Dependent packages: 24
Dependent repositories: 507
Stars: 3,492 on GitHub
Forks: 1,593 on GitHub
See more repository details: repos.ecosyste.ms
Last synced: 4 days ago
seqlike 1.3.3
SeqLike is a Python package that lets you conveniently manipulate biological sequences. It solves...8 versions - Latest release: over 1 year ago - 1 dependent repositories - 186 stars on GitHub
cctbx-base 2022.10
The Computational Crystallography Toolbox (cctbx) is being developed as the open source component...27 versions - Latest release: over 1 year ago - 4 dependent packages - 1 dependent repositories - 175 stars on GitHub
tiara 1.0.3
Deep-learning-based approach for identification of eukaryotic sequences in the metagenomic data p...1 version - Latest release: over 1 year ago - 30 stars on GitHub
orange3-text 1.12.0 💰
Orange add-on for text mining. It provides access to publicly available data, like NY Times, Twit...34 versions - Latest release: over 1 year ago - 110 stars on GitHub
pyutilsnrw 0.1.1
2 versions - Latest release: over 1 year ago - 1 stars on GitHub
Top 7.4% on conda-forge.org
14 versions - Latest release: over 1 year ago - 15 dependent packages - 32 dependent repositories - 1,082 stars on GitHub
mdanalysis 2.3.0
MDAnalysis is a Python library to analyze trajectories from molecular dynamics (MD) simulations. ...14 versions - Latest release: over 1 year ago - 15 dependent packages - 32 dependent repositories - 1,082 stars on GitHub
montreal-forced-aligner 2.0.6
The Montreal Forced Aligner is a command line utility for performing forced alignment of speech d...19 versions - Latest release: almost 2 years ago - 926 stars on GitHub
cclib 1.7.2
cclib is a Python library that provides parsers for output files of computational chemistry packa...8 versions - Latest release: almost 2 years ago - 6 dependent packages - 9 dependent repositories - 262 stars on GitHub
historydag 1.0.1
Historydag is a basic history DAG implementation for Python 3.7+ written in pure Python. A histor...4 versions - Latest release: almost 2 years ago - 1 dependent package - 1 dependent repositories - 0 stars on GitHub
teachopencadd 2021.12.2
TeachOpenCADD is a teaching platform for computer-aided drug design (CADD). The platform offers p...5 versions - Latest release: almost 2 years ago - 461 stars on GitHub
gctree 4.0.4
gctree is a command line utility and Python package for using sequence abundance information in p...5 versions - Latest release: almost 2 years ago - 10 stars on GitHub
prody 2.2.0
ProDy is a free and open-source Python package for protein structure, dynamics, and sequence anal...10 versions - Latest release: about 2 years ago - 1 dependent package - 4 dependent repositories - 296 stars on GitHub
dash-bio 1.0.2 💰
Open-source bioinformatics components for Dash5 versions - Latest release: about 2 years ago - 1 dependent package - 2 dependent repositories - 462 stars on GitHub
bio-embeddings 0.2.2 💰
Get protein embeddings from protein sequences1 version - Latest release: over 2 years ago - 347 stars on GitHub
tape_proteins 0.5
Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised le...1 version - Latest release: over 2 years ago - 1 dependent package - 536 stars on GitHub
opencadd 1.0.1
A Python library for structural cheminformatics7 versions - Latest release: over 2 years ago - 2 dependent packages - 1 dependent repositories - 69 stars on GitHub
kissim 1.0.0
Subpocket-based fingerprint for kinase pocket comparison3 versions - Latest release: over 2 years ago - 1 dependent package - 1 dependent repositories - 24 stars on GitHub
dash-bio-utils 0.0.8 💰
Parsing scripts for Dash Bio.1 version - Latest release: over 2 years ago - 4 stars on GitHub
pymodulon 0.2.1
Python package for analyzing and visualizing iModulons3 versions - Latest release: almost 3 years ago - 8 stars on GitHub
protlearn 0.0.3
A Python package for extracting protein sequence features3 versions - Latest release: about 3 years ago - 50 stars on GitHub
bio-pyvol 1.7.8
volume calculation and segmentation1 version - Latest release: almost 4 years ago - 17 stars on GitHub
synbiochem-py 0.6.34
synbiochem-py: Core python modules for SYNBIOCHEM.1 version - Latest release: about 4 years ago - 1 dependent package - 1 dependent repositories - 2 stars on GitHub
datacache 1.1.5
Helpers for transparently downloading datasets3 versions - Latest release: almost 6 years ago - 5 stars on GitHub