Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

cran.r-project.org "population-genomics" keyword

vcfppR 0.4.5

Rapid Manipulation of the Variant Call Format (VCF)
6 versions - Latest release: about 2 months ago - 221 downloads last month - 8 stars on GitHub - 1 maintainer

Clustering Genetic Sequence Data Using the HierBAPS Algorithm
5 versions - Latest release: over 1 year ago - 1 dependent package - 2 dependent repositories - 300 downloads last month - 29 stars on GitHub - 1 maintainer

Top 6.6% on cran.r-project.org

vcfR 1.15.0

Manipulate and Visualize VCF Data
16 versions - Latest release: 6 months ago - 25 dependent packages - 55 dependent repositories - 7.22 thousand downloads last month - 233 stars on GitHub - 1 maintainer

assignPOP 1.3.0

Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework
13 versions - Latest release: 2 months ago - 495 downloads last month - 17 stars on GitHub - 1 maintainer

Top 6.9% on cran.r-project.org

hierfstat 0.5-11

Estimation and Tests of Hierarchical F-Statistics
15 versions - Latest release: about 2 years ago - 6 dependent packages - 21 dependent repositories - 5.8 thousand downloads last month - 23 stars on GitHub - 1 maintainer

PopGenHelpR 1.3.0

Streamline Population Genomic and Genetic Analyses
3 versions - Latest release: 17 days ago - 255 downloads last month - 3 stars on GitHub - 1 maintainer

Related Keywords

population-genetics 5 r 4 rstats 3 vcf 2 vcf-data 2 fstatistics 1 gwas 1 hierfstat 1 kinship 1 quantitative-genetics 1 r-package 1 simulations 1 diversity 1 fst 1 heterozygosity 1 interpolation 1 neis 1 private-alleles 1 snmf 1 structure 1 devtools 1 radseq 1 population-assignment 1 machine-learning 1 gbs 1 data-integration 1 cross-validation 1 visualization 1 rcpp 1 genomics 1 population-structure 1 visulization 1 htslib 1 fastr 1 bioinformatics 1