Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

juliahub.com "genomics" keyword

MotifPvalue 0.1.0
Threshold and p-value computations for Position Weight Matrices
1 version - Latest release: over 2 years ago - 2 stars on GitHub
Crispulator 0.5.1
✂️ Pooled CRISPR screen optimization tool
4 versions - Latest release: about 1 year ago - 16 stars on GitHub
Kpax3 0.5.2
Bayesian bi-clustering of categorical data
3 versions - Latest release: over 4 years ago - 8 stars on GitHub
BioLab 0.13.1 💰
The nuclear package for various bioinformatics projects like GSEA.jl 🧬
4 versions - Latest release: 9 months ago - 11 stars on GitHub
PopGen 0.9.4
Population Genetics in Julia
23 versions - Latest release: over 1 year ago - 1 dependent package - 42 stars on GitHub
Bio 1.0.1
[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
2 versions - Latest release: over 1 year ago - 8 dependent repositories - 257 stars on GitHub
GenomeGraphs 0.2.0 💰
A modern genomics framework for julia
2 versions - Latest release: over 1 year ago - 1 dependent package - 64 stars on GitHub
ReadDatastores 0.4.0 💰
Datastores for reads, not your papa's FASTQ files.
5 versions - Latest release: over 1 year ago - 2 dependent packages - 10 stars on GitHub
CDLmotif 0.1.0
Discover DNA sequence motifs using convolutional dictionary learning
1 version - Latest release: over 1 year ago
BioFindr 1.0.3
Fast Inference of Biological Networks from Directed Regulations (Findr) in Julia
4 versions - Latest release: 13 days ago - 1 stars on GitHub
Nclusion 1.0.2
Scalable nonparametric clustering with unified marker gene selection for single-cell RNA-seq data
1 version - Latest release: 3 months ago - 16 stars on GitHub
GeneticsMakie 0.2.1
🧬High-performance genetics- and genomics-related data visualization using Makie.jl
8 versions - Latest release: about 2 months ago - 70 stars on GitHub
Knockoffs 1.1.8
Variable Selection with Knockoffs
13 versions - Latest release: 3 months ago - 6 stars on GitHub
Related Keywords
bioinformatics 9 julia 6 biojulia 3 biology 3 clustering 2 computational-biology 2 data-science 2 machine-learning 2 genetics 2 regulatory-genomics 2 motifs 2 multivariate 1 makie 1 visualization 1 single-cell-genomics 1 single-cell-rna-seq 1 locuszoom 1 rna-seq 1 fdr 1 single-cell 1 gene-network-inference 1 gene-network 1 multi-omics 1 causal-inference 1 gene-expression 1 statistical-genetics 1 sequence-motif 1 dna-motifs 1 dictionary-learning 1 transcription-factors 1 sequence-motifs 1 convolutional-dictionary-learning 1 transcription-factor-binding-site 1 microsatellites 1 conditional-independence-test 1 group-knockoffs 1 variable-selection 1 knockoffs 1 hypothesis-testing 1 lasso 1 model-selection 1 feature-selection 1 knockoff-filter 1 multiple-knockoffs 1 conditional-independence 1 false-discovery-rate 1 cairomakie 1 gwas 1 v2f 1 multi-ethnic 1 julia-language 1 linkage 1 qtl 1 openmendel 1 fine-mapping 1 colocalization 1 phewas 1 popgen 1 fst 1 structure 1 snps 1 ai 1 medicine 1 cluster-analysis 1 co-clustering 1 mcmc-sampler 1 bi-clustering 1 multivariate-analysis 1 categorical-data 1 multivariate-data 1 bayesian-cluster-analysis 1 population-genomics 1 simulation 1 functional-genomics 1 motif 1 pwm 1 position-weight-matrix 1 p-value 1 transcription-factor-binding 1 bam-files 1 sam-files 1 fastq-format 1 bam-format 1 sam-bam 1 sam-file 1 storage 1 fastq 1 format 1 files 1 sequencing 1 genomics-data 1 bioinformatics-data 1 fastq-files 1 genome-sequencing 1 genome-graph 1 genomes 1 bioinformatics-analysis 1 genome-assembly 1 bio 1 deprecated 1