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An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

proxy.golang.org "sequence-alignment" keyword

Top 6.4% on proxy.golang.org
github.com/shenwei356/lexicmap v0.8.1
LexicMap: efficient sequence alignment against millions of prokaryotic genomes
10 versions - Latest release: 3 months ago - 181 stars on GitHub
Top 6.4% on proxy.golang.org
github.com/shenwei356/LexicMap v0.8.1
LexicMap: efficient sequence alignment against millions of prokaryotic genomes
10 versions - Latest release: 3 months ago - 181 stars on GitHub
Top 5.8% on proxy.golang.org
github.com/lh3/bwa v0.7.19
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
6 versions - Latest release: 12 months ago - 1,654 stars on GitHub
Top 8.2% on proxy.golang.org
github.com/Martinsos/edlib v1.2.7
Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) ...
13 versions - Latest release: over 4 years ago - 556 stars on GitHub
Top 8.2% on proxy.golang.org
github.com/danielschuette/bioinformatics v0.0.0-20190119231906-85335403684f
A Collection of Bioinformatics Tools, written in Go 🐼
1 version - Latest release: about 7 years ago - 1 stars on GitHub
Top 5.9% on proxy.golang.org
github.com/lh3/minimap2 v2.1.1+incompatible
A versatile pairwise aligner for genomic and spliced nucleotide sequences
1 version - Latest release: over 8 years ago - 2,042 stars on GitHub
Top 8.2% on proxy.golang.org
github.com/DanielSchuette/bioinformatics v0.0.0-20190119231906-85335403684f
A Collection of Bioinformatics Tools, written in Go 🐼
1 version - Latest release: about 7 years ago - 1 stars on GitHub
Top 9.6% on proxy.golang.org
github.com/bbuchfink/diamond v2.1.22+incompatible 💰
Accelerated BLAST compatible local sequence aligner.
125 versions - Latest release: about 1 month ago - 1,189 stars on GitHub
Top 8.3% on proxy.golang.org
github.com/kupihleba/bioinformatics
Algorithms in Bioinformatics
Latest release: 4 months ago - 0 stars on GitHub
Related Keywords
bioinformatics 6 alignment 2 bacterial-database 2 bacterial-genomes 2 large-scale-dataset 2 lexichash 2 microbial-genomes 2 prokaryotic-genomes 2 sequence-search 2 genomics 2 golang 2 spliced-alignment 1 python 1 library 1 levehnstein-distance 1 edit-distance 1 c-plus-plus 1 alignment-path 1 fm-index 1