Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

repo1.maven.org "genomics" keyword

org.intermine:bio-source-psi-complexes 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-uniprot 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-gene-flanking-features 5.1.0
InterMine Post Processes modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-intermine-items-xml-file 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-go-annotation 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:intermine-webapp 5.1.0
InterMine core modules
10 versions - Latest release: over 1 year ago - 4 dependent packages - 241 stars on GitHub
org.intermine:bio-model 5.1.0
InterMine bio modules
10 versions - Latest release: over 1 year ago - 50 dependent packages - 241 stars on GitHub
org.intermine:bio-postprocess-create-location-overlap-index 5.1.0
InterMine Post Processes modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-mammalian-phenotype-ontology 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-testresources 5.1.0
InterMine bio modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-utr-references 5.1.0
InterMine Post Processes modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-psi-mi-ontology 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-chado-db 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-homologene 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-orthodb 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-panther 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:plugin 5.1.0
InterMine Plugin
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-references 5.1.0
InterMine Post Processes modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-isa 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-fasta 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-psi 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-intermine-items-large-xml-file 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-obo 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-R2RML-mapping 5.1.0
InterMine Post Processes modules
1 version - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-tools 5.1.0
InterMine bio modules
10 versions - Latest release: over 1 year ago - 1 dependent package - 241 stars on GitHub
org.intermine:bio-source-go 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-pubmed-gene 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:intermine-jbrowse-endpoint 5.1.0
InterMine core modules
10 versions - Latest release: over 1 year ago - 1 dependent package - 241 stars on GitHub
org.intermine:bio-source-mgi-identifiers 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-do 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-postprocess-summarise-objectstore 5.1.0
InterMine Post Processes modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:intermine-testresources 5.1.0
InterMine core modules
10 versions - Latest release: over 1 year ago - 5 dependent packages - 241 stars on GitHub
org.intermine:intermine-webtasks 5.1.0
InterMine core modules
10 versions - Latest release: over 1 year ago - 5 dependent packages - 241 stars on GitHub
org.intermine:bio-source-gff 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-intergenic-region-features 5.1.0
InterMine Post Processes modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-biogrid 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-eco 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-protein2ipr 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:intermine-resources 5.1.0
InterMine core modules
10 versions - Latest release: over 1 year ago - 70 dependent packages - 241 stars on GitHub
org.intermine:bio-postprocess-create-intron-features 5.1.0
InterMine Post Processes modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-malaria-gff 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-entrez-organism 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-postprocess-make-spanning-locations 5.1.0
InterMine Post Processes modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-overlap-view 5.1.0
InterMine Post Processes modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-omim 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-kegg-pathway 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-vcf 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-delimited 5.1.0
InterMine bio sources modules
3 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-search-index 5.1.0
InterMine Post Processes modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-postprocess-transfer-sequences 5.1.0
InterMine Post Processes modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-wormbase-identifiers 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:intermine-objectstore 5.1.0
InterMine core modules
10 versions - Latest release: over 1 year ago - 9 dependent packages - 241 stars on GitHub
org.intermine:bio-webapp 5.1.0
InterMine bio modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-source-ncbi-gff 5.1.0
InterMine bio sources modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.intermine:bio-postprocess-create-autocomplete-index 5.1.0
InterMine Post Processes modules
10 versions - Latest release: over 1 year ago - 241 stars on GitHub
org.monarchinitiative.phenol:phenol-cli 2.1.1
phenol-cli gives command line access to phenol
26 versions - Latest release: about 1 month ago - 1 dependent repositories - 19 stars on GitHub
org.monarchinitiative.phenol:phenol-analysis 2.1.1
phenol-analysis implements some algorithms for working with ontology data
26 versions - Latest release: about 1 month ago - 1 dependent package - 3 dependent repositories - 19 stars on GitHub
org.monarchinitiative.phenol:phenol 2.1.1
Phenotype Ontology Library
26 versions - Latest release: about 1 month ago - 19 stars on GitHub
it.polimi.genomics:GMQL-Spark 5.0
Spark implementation of GMQL operators
2 versions - Latest release: almost 6 years ago - 4 dependent packages - 2 dependent repositories - 16 stars on GitHub
it.polimi.genomics:GMQL-Server 5.0
Module for the creation of the queries
2 versions - Latest release: almost 6 years ago - 4 dependent packages - 2 dependent repositories - 16 stars on GitHub
it.polimi.genomics:GMQL-Cli 5.0
Command line interface
1 version - Latest release: almost 6 years ago - 16 stars on GitHub
it.polimi.genomics:GMQL-Profiler 5.0
Dataset Profiling
2 versions - Latest release: almost 6 years ago - 1 dependent package - 1 dependent repositories - 16 stars on GitHub
it.polimi.genomics:GMQL-Core 5.0
Core data structures
2 versions - Latest release: almost 6 years ago - 8 dependent packages - 3 dependent repositories - 16 stars on GitHub
it.polimi.genomics:Compiler 5.0
Compiler of GMQL queries
2 versions - Latest release: almost 6 years ago - 2 dependent packages - 2 dependent repositories - 16 stars on GitHub
it.polimi.genomics:GMQL-PythonAPI 5.0
Interface to the Python library
2 versions - Latest release: almost 6 years ago - 16 stars on GitHub
it.polimi.genomics:GMQL-Repository 5.0
Module for the management of the GMQL datasets
2 versions - Latest release: almost 6 years ago - 1 dependent package - 3 dependent repositories - 16 stars on GitHub
it.polimi.genomics:gmql 5.0
Polimi GMQL, Big Data processing for Genomics
2 versions - Latest release: almost 6 years ago - 16 stars on GitHub
it.polimi.genomics:GMQL-SManager 5.0
Module that submits and manages the execution of queries
2 versions - Latest release: almost 6 years ago - 2 dependent repositories - 16 stars on GitHub
org.biojava:biojava-phylo 4.2.12
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
20 versions - Latest release: almost 6 years ago - 3 dependent packages - 6 dependent repositories - 557 stars on GitHub
Top 7.1% on repo1.maven.org
org.biojava:biojava-core 7.1.1
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
58 versions - Latest release: 3 months ago - 25 dependent packages - 116 dependent repositories - 557 stars on GitHub
Top 8.0% on repo1.maven.org
org.biojava:biojava-alignment 7.1.1
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
58 versions - Latest release: 3 months ago - 10 dependent packages - 58 dependent repositories - 557 stars on GitHub
Top 8.9% on repo1.maven.org
org.biojava:biojava-ontology 7.1.1
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
58 versions - Latest release: 3 months ago - 6 dependent packages - 14 dependent repositories - 557 stars on GitHub
org.biojava:biojava-genome 7.1.1
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
58 versions - Latest release: 3 months ago - 4 dependent packages - 15 dependent repositories - 557 stars on GitHub
org.biojava:biojava-aa-prop 7.1.1
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
58 versions - Latest release: 3 months ago - 3 dependent repositories - 557 stars on GitHub
org.biojava:biojava-modfinder 7.1.1
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
58 versions - Latest release: 3 months ago - 1 dependent package - 2 dependent repositories - 557 stars on GitHub
org.biojava:biojava-protein-comparison-tool 7.1.1
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
12 versions - Latest release: 3 months ago - 557 stars on GitHub
org.biojava:biojava-integrationtest 7.1.1
A module which only has the purpose to run slow running integration tests. They can be executed b...
58 versions - Latest release: 3 months ago - 523 stars on GitHub
org.biojava:biojava-ws 7.1.1
This module deals with bioinformatics web services that could be used to process Biojava objects ...
58 versions - Latest release: 3 months ago - 9 dependent repositories - 523 stars on GitHub
org.biojava:biojava-survival 7.1.1
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
58 versions - Latest release: 3 months ago - 557 stars on GitHub
org.biojava:biojava-structure-gui 7.1.1
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
58 versions - Latest release: 3 months ago - 36 dependent repositories - 557 stars on GitHub
org.biojava:biojava-sequencing 4.2.12
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
29 versions - Latest release: almost 6 years ago - 3 dependent repositories - 557 stars on GitHub
org.biojava:biojava 7.1.1
BioJava is an open-source project dedicated to providing a Java framework for processing biologic...
58 versions - Latest release: 3 months ago - 1 dependent package - 10 dependent repositories - 557 stars on GitHub
org.biojava:biojava-protein-disorder 7.1.1
This module is for predicting disordered regions in protein sequences
58 versions - Latest release: 3 months ago - 1 dependent repositories - 523 stars on GitHub
org.disq-bio:disq 0.3.8
A library for manipulating bioinformatics sequencing formats in Apache Spark.
11 versions - Latest release: about 3 years ago - 6 dependent packages - 2 dependent repositories - 30 stars on GitHub
com.lifeomic:spark-vcf 0.3.3
Spark datasource for vcf files
6 versions - Latest release: over 4 years ago - 15 stars on GitHub
Related Keywords
bioinformatics 167 java 157 python 132 data-visualization 76 data-warehouse 76 genetics 76 lgplv3 76 open-source 76 opensource 76 data-visualisation 76 perl 76 postgresql 76 tomcat 76 tomcat8 76 webservices 76 clojurescript 76 clojure 76 biology 76 api 76 scala 72 spark 67 r 55 parquet 55 big-data 55 avro 55 structure-alignment 16 structural-bioinformatics 16 sequence-alignment 16 protein-structure 16 protein-sequences 16 protein-modification 16 protein-data-bank 16 pdb 16 parser-library 16 bigdata 11 gmql-script 10 genomic-tertiary-analysis 10 genometric-query-language 10 gdm-dataset-architecture 10 gdm 10 engine-configurations 10 engine 10 dataset 10 data-management-engine 10 data-analysis 10 cross-engine-execution 10 architecture 10 ngs 9 machine-learning 7 ontologies 6 monarchinitiative 6 mammalian-phenotype-ontology 6 human-phenotype-ontology 6 phenomics 6 phenotypes 6 delta 5 gwas 5 population-genetics 5 regression 5 dna 5 sequencing 5 vcf 4 sam 3 java-api 3 fasta 3 cram 3 bam 3 analyzing-genomic-data 3 fgbio 3 molecular-indexes 3 umi 3 finite-state-automata 2 finite-state-transducer 2 fuzzy-search 2 information-retrieval 2 levenshtein-automata 2 levenshtein-distance 2 natural-language-processing 2 search-engine 2 spelling-correction 2 universal-automata 2 edit-distance 2 distance-metric 2 dictionary 2 data-science 2 computer-science 2 computational-biology 2 approximate-string-matching 2 science 2 genome 2 gatk 2 kmers 2 kmer-frequency-count 2 kmer-counting 2 docker 1 gcp 1 go 1 ruby 1 workflow 1 workflow-engine 1