Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
spack.io "fasta" keyword
swarm 3.0.0
A robust and fast clustering method for amplicon-based studies.2 versions - Latest release: about 2 years ago - 105 stars on GitHub
redundans 0.13c
Redundans pipeline assists an assembly of heterozygous genomes.2 versions - Latest release: about 2 years ago - 99 stars on GitHub
smof 2.13.1
Explore and analyze biological sequence data1 version - Latest release: about 2 years ago - 12 stars on GitHub
Top 7.7% on spack.io
4 versions - Latest release: over 1 year ago - 5 dependent packages - 556 stars on GitHub - 1 maintainer
vsearch 2.22.1
VSEARCH is a versatile open-source tool for metagenomics.4 versions - Latest release: over 1 year ago - 5 dependent packages - 556 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
4
clustering
2
metabarcoding
2
microbiome
2
sequence
2
genomics
2
polymorphic
1
python
1
scaffolding
1
biology
1
sequence-analysis
1
amplicon
1
chimera
1
fastq
1
metagenomics
1
search
1
sequence-alignment
1
pipeline
1
paired-end
1
mate-pairs
1
heterozygous
1
genome-assembly
1
gap
1
docker-image
1
contigs
1
closing
1
assembly
1
assembled-contigs
1