Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
crates.io "sequencing" keyword
fxread 0.2.12
A barebones fastx reader for rust19 versions - Latest release: 5 months ago - 5 dependent packages - 8.43 thousand downloads total - 0 stars on GitHub - 1 maintainer
casmap 0.1.3
A way to count and characterize constructs for cas12 6-plex CRISPR screens4 versions - Latest release: over 1 year ago - 1.35 thousand downloads total - 2 stars on GitHub - 1 maintainer
markov-flow 0.3.2
Graph analysis utilizing (adjacency) matrix calculations based on flows through a Markov chain.6 versions - Latest release: over 1 year ago - 2.24 thousand downloads total - 1 maintainer
ratio-markov 0.3.2
Graph analysis utilizing (adjacency) matrix calculations based on flows through a Markov chain.1 version - Latest release: over 1 year ago - 428 downloads total - 1 maintainer
ska 0.3.7
Split k-mer analysis16 versions - Latest release: 3 months ago - 1 dependent repositories - 4.98 thousand downloads total - 55 stars on GitHub - 1 maintainer
podders 0.1.3
Write uncompressed Pod5 files in native rust. No FFI! PODDDDERS4 versions - Latest release: 5 months ago - 1.2 thousand downloads total - 0 stars on GitHub - 1 maintainer
fxtools 0.2.32
A collection of commandline Fasta/Fastq utility tools32 versions - Latest release: about 1 month ago - 9.12 thousand downloads total - 2 stars on GitHub - 1 maintainer
fastx 0.2.1
FastX reads Fasta and FastQ files with little overhead.4 versions - Latest release: 5 months ago - 1 dependent package - 1.7 thousand downloads total - 2 stars on GitHub - 1 maintainer
Top 7.4% on crates.io
13 versions - Latest release: 29 days ago - 1 dependent package - 37 dependent repositories - 122 thousand downloads total - 776 stars on GitHub - 1 maintainer
hts-sys 2.1.4
This library provides HTSlib bindings.13 versions - Latest release: 29 days ago - 1 dependent package - 37 dependent repositories - 122 thousand downloads total - 776 stars on GitHub - 1 maintainer
Top 4.9% on crates.io
60 versions - Latest release: 4 months ago - 46 dependent packages - 54 dependent repositories - 304 thousand downloads total - 260 stars on GitHub - 1 maintainer
rust-htslib 0.46.0
This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.60 versions - Latest release: 4 months ago - 46 dependent packages - 54 dependent repositories - 304 thousand downloads total - 260 stars on GitHub - 1 maintainer
intc 0.3.3
An implementation of the *-INC method to calculate an empirical FDR for non-targeting controls in...10 versions - Latest release: about 1 year ago - 1 dependent package - 3.46 thousand downloads total - 0 stars on GitHub - 1 maintainer
Top 9.4% on crates.io
3 versions - Latest release: over 2 years ago - 6 dependent packages - 7 dependent repositories - 27.1 thousand downloads total - 63 stars on GitHub - 1 maintainer
debruijn 0.3.4
Tools for DNA sequences: efficient k-mer manipulation, De Bruijn graph construction and compactio...3 versions - Latest release: over 2 years ago - 6 dependent packages - 7 dependent repositories - 27.1 thousand downloads total - 63 stars on GitHub - 1 maintainer
alpha-rra 0.1.5
An implementation of the Alpha-RRA algorithm for p-value aggregation on groups of genes5 versions - Latest release: over 1 year ago - 1 dependent package - 2.23 thousand downloads total - 1 stars on GitHub - 1 maintainer
sgcount 0.1.32
A fast and flexible sgRNA counter14 versions - Latest release: 4 months ago - 4 thousand downloads total - 8 stars on GitHub - 1 maintainer
cgt_bacpop 0.1.0
Label core and rare genes in pangenome dataa1 version - Latest release: 5 months ago - 309 downloads total - 2 stars on GitHub - 1 maintainer
genomicsqlite 0.9.4
Genomics Extension for SQLite16 versions - Latest release: over 1 year ago - 6.57 thousand downloads total - 152 stars on GitHub - 1 maintainer
sequencer 0.1.1
Dependency graph processing libarary3 versions - Latest release: over 2 years ago - 979 downloads total - 1 stars on GitHub - 1 maintainer
casgen 0.1.4
A way to generate cas12 6-plex CRISPR sequences4 versions - Latest release: over 1 year ago - 1.22 thousand downloads total - 0 stars on GitHub - 1 maintainer
disambiseq 0.1.10
Create unambiguous one-off mismatch libraries for DNA sequences11 versions - Latest release: 12 months ago - 3 dependent packages - 3.72 thousand downloads total - 0 stars on GitHub - 1 maintainer
illumina_coordinates 0.9.1
Parses Illumina sequence identifiers found in FASTQ files2 versions - Latest release: almost 6 years ago - 1.35 thousand downloads total - 0 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
16
crispr
5
graph
4
fastq
3
sgrna
3
genomics
3
dna
3
probability
2
clustering
2
matrix
2
rust
2
cas12
2
htslib
2
bam
2
pileup
2
cli
2
fasta
2
kmer
1
debruijn
1
vcf
1
sam
1
pangenome
1
sqlite
1
sqlite3
1
gamedev
1
mismatch
1
champ
1
illumina
1
ngs
1
cram
1
bcf
1
genome
1
toolkit
1
fastx
1
nanopore
1
file-parsing
1
ska
1
sequence
1
k-mer
1
alignment
1