Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
juliahub.com "gillespie-algorithm" keyword
ReactionNetworkImporters 0.14.1 💰
Julia Catalyst.jl importers for various reaction network file formats like BioNetGen and stoichio...26 versions - Latest release: 3 months ago - 25 stars on GitHub
SBMLToolkit 0.1.25 💰
SBML differential equation and chemical reaction model (Gillespie simulations) for Julia's SciML ...26 versions - Latest release: 9 months ago - 1 dependent package - 35 stars on GitHub
Top 4.9% on juliahub.com
72 versions - Latest release: 6 months ago - 16 dependent packages - 422 stars on GitHub
Catalyst 13.5.1 💰
Chemical reaction network and systems biology interface for scientific machine learning (SciML). ...72 versions - Latest release: 6 months ago - 16 dependent packages - 422 stars on GitHub
FiniteStateProjection 0.3.0 💰
Finite State Projection algorithms for chemical reaction networks5 versions - Latest release: 3 months ago - 18 stars on GitHub
Top 6.9% on juliahub.com
32 versions - Latest release: over 1 year ago - 2 dependent packages - 3 dependent repositories - 419 stars on GitHub
DiffEqBiological 4.3.0 💰
Chemical reaction network and systems biology interface for scientific machine learning (SciML). ...32 versions - Latest release: over 1 year ago - 2 dependent packages - 3 dependent repositories - 419 stars on GitHub
DelaySSAToolkit 0.2.6
DelaySSAToolkit.jl: a tool in Julia for stochastic simulation with delays8 versions - Latest release: 9 months ago - 15 stars on GitHub
MomentClosure 0.3.1
Tools to generate and study moment equations for any chemical reaction network using various mome...4 versions - Latest release: 8 months ago - 41 stars on GitHub
EvolutionaryModelingTools 0.1.5
Simulate evolutionary biology models with Gillespie algorithm.6 versions - Latest release: over 1 year ago - 7 stars on GitHub
Related Keywords
systems-biology
6
julia
5
differential-equations
4
chemical-reaction-networks
4
biology
3
chemical-reactions
3
sciml
3
ode
3
gene-network
3
simulation
3
systems-biology-simulation
2
rate-laws
2
scientific-machine-learning
2
dsl
2
sde
2
reaction-network
2
moments
1
moment-equations
1
stochastic-process
1
stochastic-simulation-algorithm
1
moment-closure
1
stochastic-processes
1
evolutionary-dynamics
1
evolution
1
ecology
1
delay-systems
1
stochastic-simulations
1
biological-modeling
1
finite-state-projection
1
julia-package
1
quantitative-systems-pharmacology
1
sbml
1
chemical-kinetics
1