Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
juliahub.com "systems-biology" keyword
Top 4.9% on juliahub.com
72 versions - Latest release: 6 months ago - 16 dependent packages - 422 stars on GitHub
Catalyst 13.5.1 💰
Chemical reaction network and systems biology interface for scientific machine learning (SciML). ...72 versions - Latest release: 6 months ago - 16 dependent packages - 422 stars on GitHub
SBMLToolkit 0.1.25 💰
SBML differential equation and chemical reaction model (Gillespie simulations) for Julia's SciML ...26 versions - Latest release: 9 months ago - 1 dependent package - 35 stars on GitHub
CellMLToolkit 2.11.0 💰
CellMLToolkit.jl is a Julia library that connects CellML models to the Scientific Julia ecosystem.25 versions - Latest release: about 1 year ago - 53 stars on GitHub
sparseQFCA 1.9.0
Developed a registered Julia package which quantifies the redundancies in genome-scale metabolic ...13 versions - Latest release: 8 months ago - 1 stars on GitHub
LikelihoodProfiler 0.5.0
LikelihoodProfiler is a Julia package for practical identifiability analysis and confidence inter...4 versions - Latest release: about 2 years ago - 16 stars on GitHub
Glycolysis 0.7.4
Package for modeling glycolysis activity18 versions - Latest release: 21 days ago - 6 stars on GitHub
SBML 1.5.1
Julia interface to the Systems Biology Markup Language (SBML) library35 versions - Latest release: 6 months ago - 6 dependent packages - 28 stars on GitHub
FiniteStateProjection 0.3.0 💰
Finite State Projection algorithms for chemical reaction networks5 versions - Latest release: 3 months ago - 18 stars on GitHub
Top 6.9% on juliahub.com
32 versions - Latest release: over 1 year ago - 2 dependent packages - 3 dependent repositories - 419 stars on GitHub
DiffEqBiological 4.3.0 💰
Chemical reaction network and systems biology interface for scientific machine learning (SciML). ...32 versions - Latest release: over 1 year ago - 2 dependent packages - 3 dependent repositories - 419 stars on GitHub
DelaySSAToolkit 0.2.6
DelaySSAToolkit.jl: a tool in Julia for stochastic simulation with delays8 versions - Latest release: 9 months ago - 15 stars on GitHub
MomentClosure 0.3.1
Tools to generate and study moment equations for any chemical reaction network using various mome...4 versions - Latest release: 7 months ago - 41 stars on GitHub
BioMASS 0.8.2
Julia interface to BioMASS14 versions - Latest release: about 1 year ago - 0 stars on GitHub
Related Keywords
julia
7
gillespie-algorithm
6
differential-equations
5
chemical-reaction-networks
4
ode
4
sciml
4
modeling
3
gene-network
3
scientific-machine-learning
3
simulation
3
systems-biology-simulation
3
reaction-network
2
biology
2
rate-laws
2
chemical-reactions
2
sbml
2
dsl
2
sde
2
moment-closure
1
moments
1
stochastic-processes
1
delay-systems
1
stochastic-simulation-algorithm
1
stochastic-process
1
stochastic-simulations
1
quantitative-systems-pharmacology
1
moment-equations
1
dynamical-systems
1
biochemical-networks
1
bifurcation-diagram
1
bifurcation
1
computational-biology
1
continuation
1
kinetic-modeling
1
parameter-estimation
1
cellml
1
physiology
1
bioinformatics
1
qfca
1
fca
1
confidence-intervals
1
likelihood
1
identifiability
1
identifiability-analysis
1
ode-model
1
metabolism
1
libsbml
1
cobra
1
julia-package
1
biological-modeling
1
finite-state-projection
1