pypi.org "ome" keyword
itk-ioomezarrngff 0.3.0
IO for images stored in the OME-Zarr format.12 versions - Latest release: over 2 years ago - 1 dependent package - 263 downloads last month - 10 stars on GitHub - 3 maintainers
ome-zarr-io 0.12.1
Write, read, and validate OME-Zarr 0.5 images and high-content-screening plates11 versions - Latest release: 2 days ago - 513 downloads last month - 0 stars on GitHub - 1 maintainer
Top 4.9% on pypi.org
44 versions - Latest release: 12 months ago - 23 dependent packages - 17 dependent repositories - 129 thousand downloads last month - 61 stars on GitHub - 1 maintainer
ome-types 0.6.3 💰
Python dataclasses for the OME data model44 versions - Latest release: 12 months ago - 23 dependent packages - 17 dependent repositories - 129 thousand downloads last month - 61 stars on GitHub - 1 maintainer
nis2pyr 0.6.2
Utility for converting Nikon ND2 files to tiled pyramidal OME TIFF files.9 versions - Latest release: over 4 years ago - 1 dependent repositories - 96 downloads last month - 13 stars on GitHub - 1 maintainer
jupyter-omero-authenticator 0.0.1
Jupyterhub OMERO authenticator2 versions - Latest release: almost 7 years ago - 1 dependent repositories - 39 downloads last month - 0 stars on GitHub - 1 maintainer
hrm-omero 0.4.0
A connector between the Huygens Remote Manager (HRM) and OMERO.4 versions - Latest release: over 4 years ago - 1 dependent repositories - 14 downloads last month - 2 stars on GitHub - 1 maintainer
bioformats-jar 2020.5.27 💰
bioformats_package.jar installer for scyjava4 versions - Latest release: over 4 years ago - 8 dependent packages - 4 dependent repositories - 1.92 thousand downloads last month - 0 stars on GitHub - 1 maintainer
Top 3.6% on pypi.org
66 versions - Latest release: about 1 month ago - 33 dependent packages - 16 dependent repositories - 190 thousand downloads last month - 263 stars on GitHub - 4 maintainers
ome-zarr 0.21.0
Implementation of images in Zarr files.66 versions - Latest release: about 1 month ago - 33 dependent packages - 16 dependent repositories - 190 thousand downloads last month - 263 stars on GitHub - 4 maintainers
bffile 0.1.1
Yet another Bio-Formats wrapper for python7 versions - Latest release: 8 months ago - 2.31 thousand downloads last month - 24 stars on GitHub - 1 maintainer
Top 8.7% on pypi.org
31 versions - Latest release: 9 months ago - 14 dependent repositories - 907 downloads last month - 6 stars on GitHub - 4 maintainers
omego 0.8.0
OME installation and administration tool31 versions - Latest release: 9 months ago - 14 dependent repositories - 907 downloads last month - 6 stars on GitHub - 4 maintainers
sldread 0.1.0
Eager, process-isolated reader for SlideBook .sld microscopy files via Bio-Formats, with metadata...1 version - Latest release: 5 months ago - 19 downloads last month - 0 stars on GitHub - 1 maintainer
omero-web-zarr 0.1.1
OMERO.web plugin for OME-Zarr1 version - Latest release: over 3 years ago - 104 downloads last month - 5 stars on GitHub - 1 maintainer
omero-prometheus-tools 0.2.3
Tools for monitoring OMERO with Prometheus5 versions - Latest release: almost 5 years ago - 1 dependent repositories - 33 downloads last month - 2 stars on GitHub - 4 maintainers
eubi-bridge 0.1.5
A package for converting datasets to OME-Zarr format.52 versions - Latest release: 23 days ago - 121 downloads last month - 32 stars on GitHub - 1 maintainer
eubi-bridge-lite 0.1.5
Convert microscopy images to OME-Zarr: eubi-bridge without Java and Bio-Formats.2 versions - Latest release: 23 days ago - 0 downloads last month - 32 stars on GitHub - 1 maintainer
clr-openmanage-mcp 1.0.0
MCP server for Dell OpenManage Enterprise server management1 version - Latest release: 9 months ago - 27 downloads last month - 0 stars on GitHub - 1 maintainer
iscc-bio 0.2.0
BioCodes - ISCC Processing for BioImaging Data2 versions - Latest release: 2 months ago - 248 downloads last month - 0 stars on GitHub - 1 maintainer
ome-zarr-pyramid 0.0.9
Read, write and downscale OME-Zarr (NGFF) pyramids with a lazy, memory-bound Pyramid object5 versions - Latest release: about 1 month ago - 60 downloads last month - 7 stars on GitHub - 1 maintainer
ome-metadata 0.5.0
Ome metadata as a rust/python structure.9 versions - Latest release: 5 months ago - 182 downloads last month - 0 stars on GitHub - 1 maintainer
mrc2omezarr 0.3
Command line tool to convert MRC-files to OME-Zarr.2 versions - Latest release: about 2 years ago - 50 downloads last month - 1 maintainer
ome-zarr-models 1.8.1
A minimal Python package for reading OME-Zarr (meta)data25 versions - Latest release: 2 months ago - 54.9 thousand downloads last month - 39 stars on GitHub - 1 maintainer
multiscale-spatial-image 2.1.0
Generate a multiscale, chunked, multi-dimensional spatial image data structure that can be serial...18 versions - Latest release: 12 months ago - 94 thousand downloads last month - 58 stars on GitHub - 3 maintainers
Related Keywords
zarr
10
python
7
ngff
7
ome-zarr
7
microscopy
7
bioimage
5
omero
4
dask
4
ome-zarr-converter
4
multiscale
3
image
3
conversion
3
imaging
3
bioformats
3
openmicroscopy
2
image-processing
2
file-format
2
concatenation
2
itk
2
metadata
2
bioimaging
2
hrm
1
omero-py
1
pdoc
1
poetry
1
tensorstore
1
deconvolution
1
image-pyramid
1
pyramid
1
xarray
1
scientific-computing
1
python-black
1
visualization
1
tool
1
install
1
huygens
1
image-analysis
1
fair-data
1
validation
1
plate
1
image-file-format
1
huygens-remote-manager
1
high-content-screening
1
hcs
1
web
1
prometheus
1
omero-import
1
omero-web
1
omero-server
1
monitoring
1
bioimage-analysis
1
lazy
1
out-of-core
1
jupyterhub-authenticator
1
scientific
1
medical
1
formats
1
imread
1
file-formats
1
content-identification
1
imagewalk
1
hash
1
identifier
1
iscc
1
types
1
schema
1
ome-model
1
tiff
1
nis-elements
1
nikon
1
nd2
1
jupyterhub
1
jupyter
1
tomography
1
mrc
1
cryoet
1
cryo-et
1
slidebook
1
sld
1
napari
1
bio-formats
1
mcp-server
1
server-management
1
openmanage
1
model-context-protocol
1
mcp
1
dell
1
insight-toolkit
1