Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "bioimaging" keyword
pygpseq 3.4.1
A GPSeq image analysis package6 versions - Latest release: over 2 years ago - 1 dependent repositories - 31 downloads last month - 2 stars on GitHub - 1 maintainer
biomero 1.9.0
A python library for easy connecting between OMERO (jobs) and a Slurm cluster13 versions - Latest release: 14 days ago - 178 downloads last month - 7 stars on GitHub - 1 maintainer
pyimc 0.1.2
Rust library for reading imaging mass cytometry (IMC) data stored in .mcd files.3 versions - Latest release: over 1 year ago - 1 dependent repositories - 44 downloads last month - 1 stars on GitHub - 1 maintainer
partseg 0.15.2
PartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analy...72 versions - Latest release: 9 months ago - 1 dependent package - 1 dependent repositories - 2.05 thousand downloads last month - 27 stars on GitHub - 1 maintainer
iohub 0.1.0
N-dimensional bioimaging data I/O with OME metadata in Python5 versions - Latest release: 3 months ago - 1 dependent package - 1 dependent repositories - 172 downloads last month - 26 stars on GitHub - 1 maintainer
Top 8.1% on pypi.org
39 versions - Latest release: 11 days ago - 8 dependent packages - 6 dependent repositories - 4.46 thousand downloads last month - 18 stars on GitHub - 1 maintainer
bioimageio.core 0.6.5
Python functionality for the bioimage model zoo39 versions - Latest release: 11 days ago - 8 dependent packages - 6 dependent repositories - 4.46 thousand downloads last month - 18 stars on GitHub - 1 maintainer
napari-bioimageio 0.1.3
Python libraries for loading, running and packaging bioimage.io models3 versions - Latest release: almost 2 years ago - 51 downloads last month - 18 stars on GitHub - 1 maintainer
partsegcore-compiled-backend 0.15.6
PartSegCore compiled backend,15 versions - Latest release: 4 months ago - 1 dependent package - 1 dependent repositories - 2.5 thousand downloads last month - 1 stars on GitHub - 1 maintainer
omero-slurm-client 1.1.2
deprecated omero_slurm_client package, use biomero instead4 versions - Latest release: 4 months ago - 155 downloads last month - 7 stars on GitHub - 1 maintainer
napari-tiledb-bioimg 0.0.1
Support reading and writing TileDB-Bioimaging image arrays within Napari1 version - Latest release: about 1 year ago - 21 downloads last month - 7 stars on GitHub - 3 maintainers
radiantkit 0.0.1
Radial Image Analysis Toolkit1 version - Latest release: over 5 years ago - 1 dependent repositories - 12 downloads last month - 2 stars on GitHub - 1 maintainer
partseg-stardist 0.1.0
PartSeg plugin to use stardist,1 version - Latest release: almost 4 years ago - 1 dependent repositories - 14 downloads last month - 0 stars on GitHub - 1 maintainer
partseg-cellpose 0.1.0
PartSeg plugin to use cellpose,1 version - Latest release: almost 4 years ago - 1 dependent repositories - 17 downloads last month - 0 stars on GitHub - 1 maintainer
fish-prode 1.1.0
A FISH probe design web interface.3 versions - Latest release: almost 6 years ago - 1 dependent repositories - 51 downloads last month - 8 stars on GitHub - 1 maintainer
tiledb-bioimg 0.2.12
Package supports all bio-imaging functionality provided by TileDB13 versions - Latest release: about 1 month ago - 1 dependent package - 1 dependent repositories - 1.23 thousand downloads last month - 14 stars on GitHub - 2 maintainers
Related Keywords
python
4
image-analysis
4
bioimage-analysis
3
cell
3
slurm
2
high-performance-computing
2
fair
2
high-throughput-screening
2
high-content-screening
2
cytomine
2
biomero
2
biaflows
2
napari
2
bioimage-infomatics
2
deep-learning
2
tiledb
2
biology
2
DNA
2
microscopy
2
image
2
analysis
2
3d
2
fish-signals
2
gpseq
2
image-analysis-workflows
2
image-processing
2
nuclei
2
tiff
2
omero
2
tiff-format
2
tiff-files
2
fluorescence
1
hybridization
1
genome
1
design
1
dna
1
python-package
1
web-interface
1
fish
1
gui
1
probe
1
hacktoberfest
1
ifish
1
ifish-probe
1
oligonucleotide
1
FISH
1
RNA
1
cellpose
1
stardist
1
napari-plugin
1
ndimensional-arrays
1
image-metadata
1
GUI
1
rust
1
multiplexed-imaging
1
imaging-mass-cytometry
1
conversion
1
segmentation
1
nucleus
1