Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

Top 1.4% on pypi.org
Top 2.1% downloads on pypi.org
Top 0.6% dependent packages on pypi.org
Top 1.1% dependent repos on pypi.org
Top 1.6% docker downloads on pypi.org

pypi.org : dipy

Diffusion MRI Imaging in Python

Registry - Source - Homepage - Documentation - JSON
purl: pkg:pypi/dipy
Keywords: dipy, diffusionimaging, dti, tracking, tractography, diffusionmri, mri, tractometry, connectomics, brain, dipymri, microstructure, deeplearning, registration, segmentations, simulation, medical, imaging, machinelearning, signalprocessing, bundles, contextual-enhancement, denoising, diffusion-mri, dki, machine-learning, medical-imaging, neuroanatomy, neuroimaging, patch2self, python, segmentation, self-supervised-learning, spherical-harmonics
License: Other
Latest release: 2 months ago
First release: about 13 years ago
Dependent packages: 46
Dependent repositories: 204
Downloads: 29,171 last month
Stars: 651 on GitHub
Forks: 414 on GitHub
Docker dependents: 27
Docker downloads: 4,355
Total Commits: 11284
Committers: 161
Average commits per author: 70.087
Development Distribution Score (DDS): 0.822
More commit stats: commits.ecosyste.ms
See more repository details: repos.ecosyste.ms
Last synced: about 20 hours ago

mne-gui-addons 0.1
MNE-Python GUI addons.
1 version - Latest release: about 1 year ago - 1 dependent package - 105 downloads last month - 0 stars on GitHub - 1 maintainer
pilab-regis 0.0.7
Implementation of regis
7 versions - Latest release: 8 months ago - 35 downloads last month - 0 stars on GitHub - 1 maintainer
alcoholic-tfe22540 0.1.12
Framework of my master thesis on the effect of withdrawal on the white matter of alcoholic patien...
9 versions - Latest release: 10 months ago - 36 downloads last month - 0 stars on GitHub - 1 maintainer
fastmf 0.1.0
FastMF is a python package for microstructural property characterization using deep learning base...
1 version - Latest release: 3 months ago - 10 downloads last month - 0 stars on GitHub - 1 maintainer
wezel 0.1.2
Prototyping medical imaging applications
20 versions - Latest release: 11 months ago - 2 dependent repositories - 199 downloads last month - 0 stars on GitHub - 1 maintainer
dwiqc 1.5.14
Quality Assurance Pipeline for Diffusion MR Data
123 versions - Latest release: 19 days ago - 1.16 thousand downloads last month - 1 stars on GitHub - 1 maintainer
mia-processes 2.6.0
mia_processes
18 versions - Latest release: about 1 month ago - 1 dependent package - 1 dependent repositories - 209 downloads last month - 1 stars on GitHub - 3 maintainers
gcnn-dmri 0.1.0
Graph-equivariant CNNs for diffusion MRI
1 version - Latest release: over 1 year ago - 1 dependent repositories - 12 downloads last month - 1 stars on GitHub - 1 maintainer
phybers 1.1.2
Phybers: A Package for Brain Tractography Analysis.
25 versions - Latest release: 3 months ago - 1 dependent repositories - 143 downloads last month - 1 stars on GitHub - 1 maintainer
domb-napari 2024.2.29
napari plugin for analyzing fluorescence-labeled proteins redistribution
15 versions - Latest release: 3 months ago - 304 downloads last month - 1 stars on GitHub - 1 maintainer
domb 2023.11.3
DoMB Tools: Python Toolkit of Department of Molecular Biophysics
5 versions - Latest release: 6 months ago - 1 dependent package - 150 downloads last month - 1 stars on GitHub - 1 maintainer
motion-correction 0.2.2
Motion correction algorithms for FLIM data.
26 versions - Latest release: 3 months ago - 166 downloads last month - 1 stars on GitHub - 1 maintainer
qsm-forward 0.22
A forward-model simulation for Quantitative Susceptibility Mapping
24 versions - Latest release: 18 days ago - 1 dependent package - 1 dependent repositories - 313 downloads last month - 1 stars on GitHub - 1 maintainer
dbdicom 0.2.1
A pythonic interface for reading and writing DICOM databases
21 versions - Latest release: 11 months ago - 2 dependent packages - 3 dependent repositories - 105 downloads last month - 2 stars on GitHub - 2 maintainers
emcqmri 1.1.17
A distribution of a general tool for training and inference of QMRI models
24 versions - Latest release: 7 months ago - 1 dependent repositories - 212 downloads last month - 3 stars on GitLab.com - 1 maintainer
ieeg 0.5
A Python package for iEEG data processing.
5 versions - Latest release: 14 days ago - 341 downloads last month - 4 stars on GitHub - 1 maintainer
antspymm 1.3.5
multi-channel/time-series medical image processing with antspyx
99 versions - Latest release: 9 days ago - 1 dependent repositories - 802 downloads last month - 5 stars on GitHub - 1 maintainer
bonndit 0.3.1
The bonndit package contains the latest diffusion imaging tools developed at the University of Bonn.
4 versions - Latest release: about 1 year ago - 1 dependent repositories - 32 downloads last month - 5 stars on GitHub - 2 maintainers
unravel-python 1.5.2
Implementation of UNRAVEL
51 versions - Latest release: 23 days ago - 1 dependent repositories - 163 downloads last month - 6 stars on GitHub - 1 maintainer
radtract 0.2.2
Radiomic Tractometry for advanced along-tract analysis of diffusion-weighted MRI
18 versions - Latest release: 24 days ago - 117 downloads last month - 8 stars on GitHub - 2 maintainers
designer2 2.0.7
designerV2
35 versions - Latest release: about 2 months ago - 442 downloads last month - 9 stars on GitHub - 3 maintainers
afqinsight 0.4.2
AFQ-Insight: Statistical Learning for Tractometry
19 versions - Latest release: about 1 month ago - 3 dependent repositories - 69 downloads last month - 9 stars on GitHub - 2 maintainers
eddymotion 0.1.15
Pure python eddy-current and head-motion correction for dMRI, an extension of QSIprep's SHOREline...
6 versions - Latest release: 5 days ago - 1 dependent repositories - 199 downloads last month - 11 stars on GitHub - 3 maintainers
ukat 0.7.1
UKRIN Kidney Analysis Toolbox
14 versions - Latest release: 3 months ago - 1 dependent repositories - 134 downloads last month - 12 stars on GitHub - 2 maintainers
pydesigner-dwi 1.0.0
Python Port of NYU's Designer pipeline for dMRI processing
1 version - Latest release: over 1 year ago - 41 downloads last month - 16 stars on GitHub - 1 maintainer
dmri-rcnn 0.4.1
Diffusion MRI Recurrent CNN for Angular Super-resolution.
7 versions - Latest release: 6 months ago - 1 dependent repositories - 46 downloads last month - 18 stars on GitHub - 1 maintainer
trx-python 0.2.9
Experiments with new file format for tractography
11 versions - Latest release: 7 months ago - 2 dependent packages - 37.6 thousand downloads last month - 20 stars on GitHub - 1 maintainer
nlsam 0.7.1
Implementation of "Non Local Spatial and Angular Matching : Enabling higher spatial resolution di...
3 versions - Latest release: 11 months ago - 104 downloads last month - 23 stars on GitHub - 1 maintainer
Top 9.2% on pypi.org
dmri-commit 2.2.0
Convex Optimization Modeling for Microstructure Informed Tractography (COMMIT)
23 versions - Latest release: about 1 month ago - 1 dependent package - 3 dependent repositories - 318 downloads last month - 43 stars on GitHub - 4 maintainers
Top 10.0% on pypi.org
scilpy 2.0.2
Scilpy: diffusion MRI tools and utilities
6 versions - Latest release: 8 days ago - 3 dependent repositories - 349 downloads last month - 51 stars on GitHub - 3 maintainers
pyafq 1.3.1
pyAFQ: Automated Fiber Quantification ... in Python
26 versions - Latest release: about 1 month ago - 1.24 thousand downloads last month - 53 stars on GitHub - 1 maintainer
Top 5.6% on pypi.org
dmri-amico 2.0.1
Accelerated Microstructure Imaging via Convex Optimization (AMICO)
23 versions - Latest release: 8 months ago - 3 dependent packages - 6 dependent repositories - 1.32 thousand downloads last month - 93 stars on GitHub - 3 maintainers
qsiprep 0.19.1
qsiprep builds workflows for preprocessing and reconstructing q-space images
50 versions - Latest release: 8 months ago - 1 dependent repositories - 309 downloads last month - 129 stars on GitHub - 1 maintainer
tractseg 2.1.1
Fast and accurate segmentation of white matter bundles
9 versions - Latest release: over 4 years ago - 1 dependent repositories - 260 downloads last month - 213 stars on GitHub - 1 maintainer
Top 9.3% on pypi.org
clinica 0.8.1
Software platform for clinical neuroimaging studies
38 versions - Latest release: 23 days ago - 1 dependent package - 1 dependent repositories - 412 downloads last month - 214 stars on GitHub - 4 maintainers
Top 2.9% on pypi.org
fury 0.10.0
FURY - Free Unified Rendering in pYthon. A free and open-source software library for Scientific V...
17 versions - Latest release: 3 months ago - 12 dependent packages - 77 dependent repositories - 11.6 thousand downloads last month - 221 stars on GitHub - 2 maintainers
Top 7.8% on pypi.org
mriqc 24.0.0
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and ...
114 versions - Latest release: about 1 month ago - 2 dependent repositories - 1.22 thousand downloads last month - 280 stars on GitHub - 5 maintainers
Top 0.7% on pypi.org
nipype 1.8.6
Neuroimaging in Python: Pipelines and Interfaces
64 versions - Latest release: about 1 year ago - 45 dependent packages - 1,107 dependent repositories - 162 thousand downloads last month - 733 stars on GitHub - 4 maintainers
Top 1.0% on pypi.org
mne 1.7.0
MNE-Python project for MEG and EEG data analysis.
77 versions - Latest release: 29 days ago - 149 dependent packages - 646 dependent repositories - 117 thousand downloads last month - 2,511 stars on GitHub - 3 maintainers
neuroflow-yalab 0.1.2
NeuroFlow: A streamlined toolkit for DWI post-processing, offering advanced analysis and visualiz...
2 versions - Latest release: 21 days ago - 1 maintainer
pilab-alcohol 0.1.2
Analysis pipeline
2 versions - Latest release: 6 months ago - 23 downloads last month - 1 maintainer
pydactim 0.0.25
24 versions - Latest release: 7 months ago - 211 downloads last month - 1 maintainer
dmri-dicelib 1.1.1
Software library of the DICE Lab (Diffusion Imaging and Connectivity Estimation Laboratory)
6 versions - Latest release: about 1 month ago - 2 dependent packages - 770 downloads last month - 2 maintainers
dti-pipeline 1.0.1
A command line utility that allows easy modifications on DWI volumes and Datasets.
2 versions - Latest release: 7 months ago - 17 downloads last month - 1 maintainer
resomapper 0.4.1
Pipeline for processing MR images and generating parametric maps.
6 versions - Latest release: 10 months ago - 10 downloads last month - 1 maintainer
dti-conv 0.1.3
A command line utility that allows easy modifications on DWI volumes and Datasets.
4 versions - Latest release: 9 days ago - 110 downloads last month - 1 maintainer