Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
spack.io "next-generation-sequencing" keyword
roary 3.13.0
Rapid large-scale prokaryote pan genome analysis1 version - Latest release: over 1 year ago - 254 stars on GitHub
ngmlr 0.2.7
Ngmlr is a long-read mapper designed to align PacBilo or Oxford Nanopore to a reference genome wi...2 versions - Latest release: 10 months ago - 267 stars on GitHub
fq 0.10.0
fq is a library to generate and validate FASTQ file pairs. fq provides subcommands for filtering,...1 version - Latest release: 8 months ago - 50 stars on GitHub - 1 maintainer
py-pyfastaq 3.17.0
Manipulate FASTA and FASTQ files.7 versions - Latest release: 3 months ago - 64 stars on GitHub - 1 maintainer
kaiju 1.6.2
Kaiju is a program for the taxonomic classification of high-throughput sequencing reads.1 version - Latest release: about 2 years ago - 212 stars on GitHub
Related Keywords
bioinformatics
4
genomics
3
global-health
2
infectious-diseases
2
pathogen
2
research
2
sequencing
2
taxonomy
1
taxonomic-classification
1
metagenomics
1
rust
1
illumina
1
fastq-files
1
fastq
1
structural-variations
1
pacbio
1
oxford-nanopore
1
mapper
1
long-read
1
docker
1
bioconda
1
alignment
1
bioinformatics-pipeline
1