Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

pypi.org "bio" keyword

bioma 0.1.0
Bio-related data management using graph databases and web semantics.
1 version - Latest release: about 7 years ago - 28 downloads last month - 1 maintainer
bmesbio2data 0.0.0.3
Terry toolkit BMESBIO2Data
2 versions - Latest release: over 3 years ago - 15 downloads last month - 3 stars on GitHub - 1 maintainer
euu_bio 0.0.4
A Python Bio Toolkit
4 versions - Latest release: over 6 years ago - 10 downloads last month - 1 maintainer
arv 0.9.2
A fast 23andMe raw genome file parser
11 versions - Latest release: about 7 years ago - 139 downloads last month - 114 stars on GitHub - 1 maintainer
melke 1
Extract entities and relations from BIO-text
1 version - Latest release: over 3 years ago - 1 dependent repositories - 6 downloads last month - 3 stars on GitHub - 1 maintainer
gbif 0.1.0
Basic and experimental Gbif Taxon API library for Python
1 version - Latest release: almost 13 years ago - 2 dependent repositories - 7 downloads last month - 4 stars on GitHub - 1 maintainer
epsilonmumu 0.0.3
Official Repo for Epsilon Mu Mu
3 versions - Latest release: over 6 years ago - 1 dependent repositories - 12 downloads last month - 1 maintainer
anacore 3.1.0
Libraries for managing standard file formats and objects from NGS.
11 versions - Latest release: 2 months ago - 1 dependent repositories - 42 downloads last month - 4 stars on GitHub - 1 maintainer
bfasta 0.1.1
Simple fasta reader with no dependencies
2 versions - Latest release: over 1 year ago - 27 downloads last month - 0 stars on GitHub - 1 maintainer
resdk-bcm 1.0.1
BCM Plugin for Resolwe SDK for Python
2 versions - Latest release: about 7 years ago - 1 dependent repositories - 15 downloads last month - 0 stars on GitHub - 2 maintainers
Top 9.7% on pypi.org
resolwe-bio 56.0.0
Bioinformatics pipelines for the Resolwe platform
345 versions - Latest release: 20 days ago - 3 dependent repositories - 1.85 thousand downloads last month - 17 stars on GitHub - 5 maintainers
admix 1.2
An admixture analysis tool that supports raw data from 23andme, AncestryDNA, etc.
6 versions - Latest release: over 5 years ago - 1 dependent repositories - 82 downloads last month - 43 stars on GitHub - 1 maintainer
ucsc-genomic-api 1.0.2
access and query the UCSC database with an elegant and human readable Api
3 versions - Latest release: about 3 years ago - 1 dependent repositories - 45 downloads last month - 6 stars on GitHub - 1 maintainer
suchtree 1.1
A python library for doing fast, thread-safe computations on phylogenetic trees
8 versions - Latest release: 16 days ago - 1 dependent repositories - 268 downloads last month - 26 stars on GitHub - 1 maintainer
alphafold3 0.0.8 💰
Paper - Pytorch
5 versions - Latest release: 19 days ago - 636 downloads last month - 495 stars on GitHub - 1 maintainer
Top 5.5% on pypi.org
resdk 21.1.0
Resolwe SDK for Python
64 versions - Latest release: 4 months ago - 1 dependent package - 4 dependent repositories - 5.1 thousand downloads last month - 4 stars on GitHub - 5 maintainers
rnanorm 2.1.0
Common RNA-seq normalization methods
14 versions - Latest release: 7 months ago - 1 dependent repositories - 1.11 thousand downloads last month - 52 stars on GitHub - 3 maintainers
minifasta 3.0.3
A simple FASTA read and write toolbox for small to medium size projects without dependencies.
13 versions - Latest release: 10 months ago - 1 dependent package - 1 dependent repositories - 352 downloads last month - 3 stars on GitHub - 1 maintainer
chelsa-cmip6 1.0.1
This package contains function to create monthly high-resolution climatologies for a selected geo...
5 versions - Latest release: over 1 year ago - 104 downloads last month - 1 maintainer
rnaseeker 1.0.0
RNA-seq scripts and libraries
1 version - Latest release: 4 months ago - 20 downloads last month - 1 stars on GitHub - 1 maintainer
blosum 2.0.3
A simple BLOSUM toolbox without dependencies.
10 versions - Latest release: 3 months ago - 2 dependent packages - 3 dependent repositories - 2.53 thousand downloads last month - 13 stars on GitHub - 1 maintainer
drug-named-entity-recognition 1.0.3
Drug Named Entity Recognition library to find and resolve drug names in a string (drug named enti...
5 versions - Latest release: about 2 months ago - 11.6 thousand downloads last month - 14 stars on GitHub - 1 maintainer
jsw-bio 1.0.21
Jsw for biography.
21 versions - Latest release: almost 2 years ago - 1 dependent repositories - 123 downloads last month - 0 stars on GitHub - 1 maintainer
ssw_aligner 0.0.8
Python implementation of Striped Smith-Waterman Algorithm
9 versions - Latest release: over 4 years ago - 46 downloads last month - 24 stars on GitHub - 1 maintainer
pydiscordbio 1.2.3
An unoffical asynchronous wrapper for the discord.bio API.
26 versions - Latest release: over 3 years ago - 1 dependent repositories - 198 downloads last month - 5 stars on GitHub - 1 maintainer
fqutils 0.0.0.dev6
fastq file utils in python
5 versions - Latest release: over 6 years ago - 1 dependent repositories - 22 downloads last month - 1 maintainer
fastq 2.0.4
A simple FASTQ reader / toolbox for small to medium size projects without dependencies.
9 versions - Latest release: 3 months ago - 1 dependent repositories - 412 downloads last month - 4 stars on GitHub - 1 maintainer
bio-aid 0.3.1
Genetic Analysis Tools
22 versions - Latest release: 9 months ago - 26 downloads last month - 1 maintainer
sri-dictionary-mt 0.1 removed
Finds Pharma drug names in a string
1 version - Latest release: about 1 year ago
Related Keywords
bioinformatics 12 python 9 biology 4 reader 3 django 3 dataflow 3 DNA 3 pipelines 3 resolwe 3 fasta 3 nlp 2 ner 2 pharmaceutical 2 pharma 2 medical 2 biomedical 2 drug 2 NGS 2 genomics 2 sdk 2 fastq 2 artificial intelligence 2 toolbox 2 rnaseq 2 named entity recognition 2 natural language processing 2 dna 2 SNP 2 RNA 2 gene 2 smith-waterman-alignment 1 rna 1 discord 1 gdd 1 growing degree days 1 bioclimate 1 CHELSA 1 delta-change 1 climate 1 CMIP6 1 ngs 1 reader-writer 1 FASTQ 1 FASTA 1 normalization 1 genetics 1 BLOSUM 1 blosum62 1 blosum45 1 blosum50 1 blosum90 1 blosum 1 local-alignment 1 jsw 1 pharmaceuticals 1 natural-language-understanding 1 natural-language-processing 1 named-entity-recognition 1 blosum-matrix 1 drugs 1 drug-discovery 1 named entity linking 1 taxonomy 1 taxon 1 gbif 1 relation 1 entity 1 NER 1 text 1 snps 1 snpedia 1 23andme 1 RSID 1 protein 1 health 1 genome 1 disease 1 biopython 1 23andMe 1 bmes 1 database 1 graph 1 semantics 1 web 1 genialis 1 machine learning 1 data science 1 ml 1 geneml 1 biology-ai 1 artificial-intelligence 1 alphafold 1 ai 1 Prompt Engineering 1 optimizers 1 deep learning 1 tree 1 phylogeny 1 phylogenetics 1 ucsc 1