Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "clinical" keyword
zensols.mimicsid 1.7.0
Use the MedSecId section annotations with MIMIC-III corpus parsing.12 versions - Latest release: 3 months ago - 1 dependent package - 35 downloads last month - 2 stars on GitHub - 1 maintainer
simple-icd-10-cm 1.2.0
A simple python library for ICD-10-CM codes10 versions - Latest release: 11 months ago - 1 dependent repositories - 14.7 thousand downloads last month - 37 stars on GitHub - 1 maintainer
simple-icd-10-cm-new 1.1.2
A simple python library for ICD-10-CM codes1 version - Latest release: over 1 year ago - 14 downloads last month - 37 stars on GitHub - 1 maintainer
edc-auth 0.3.86
Authentication for clinicedc/edc projects154 versions - Latest release: 2 months ago - 8 dependent packages - 7 dependent repositories - 1.04 thousand downloads last month - 2 stars on GitHub - 2 maintainers
edc-model-wrapper 0.3.13
Model wrappers that add dashboard methods for clinicedc/edc projects39 versions - Latest release: 5 months ago - 6 dependent packages - 18 dependent repositories - 101 downloads last month - 1 stars on GitHub - 1 maintainer
Top 7.4% on pypi.org
360 versions - Latest release: about 2 months ago - 4 dependent packages - 9 dependent repositories - 1.81 thousand downloads last month - 28 stars on GitHub - 2 maintainers
edc 0.5.88
EDC core modules for clinicedc/edc projects.360 versions - Latest release: about 2 months ago - 4 dependent packages - 9 dependent repositories - 1.81 thousand downloads last month - 28 stars on GitHub - 2 maintainers
edc-appointment 0.4.27
Appointment module for clinicedc/edc projects203 versions - Latest release: 2 months ago - 8 dependent packages - 36 dependent repositories - 2.12 thousand downloads last month - 0 stars on GitHub - 2 maintainers
charger 0.5.2
Characterization of Germline variants4 versions - Latest release: over 6 years ago - 1 dependent repositories - 64 downloads last month - 94 stars on GitHub - 2 maintainers
ambition-screening 0.1.40
Determine a subject's eligibility for ambition/edc.37 versions - Latest release: over 4 years ago - 2 dependent repositories - 209 downloads last month - 1 stars on GitHub - 1 maintainer
chanjo-ccds 0.1
CCDS to Chanjo BED converter4 versions - Latest release: 10 months ago - 2 dependent repositories - 23 downloads last month - 1 maintainer
Top 5.9% on pypi.org
3 versions - Latest release: over 1 year ago - 8 dependent packages - 3 dependent repositories - 3.54 thousand downloads last month - 65 stars on GitHub - 1 maintainer
phenopackets 2.0.2
A python implementation of phenopackets protobuf3 versions - Latest release: over 1 year ago - 8 dependent packages - 3 dependent repositories - 3.54 thousand downloads last month - 65 stars on GitHub - 1 maintainer
Top 6.6% on pypi.org
64 versions - Latest release: almost 3 years ago - 2 dependent packages - 4 dependent repositories - 973 downloads last month - 3 maintainers
chanjo 4.6.1
Coverage analysis tool for clinical sequencing64 versions - Latest release: almost 3 years ago - 2 dependent packages - 4 dependent repositories - 973 downloads last month - 3 maintainers
loinchpo 1.2.0
A library to transform loinc measurements into hpo terms.10 versions - Latest release: over 1 year ago - 1 dependent repositories - 39 downloads last month - 6 stars on GitHub - 1 maintainer
sobolev-alignment 1.0.0
Sobolev alignment of deep probabilistic models for comparing single cell profiles1 version - Latest release: about 1 year ago - 10 downloads last month - 5 stars on GitHub - 1 maintainer
seq-pigeon 0.4.3
Pipeline tool for NGS data17 versions - Latest release: over 3 years ago - 1 dependent repositories - 29 downloads last month - 942 stars on GitHub - 1 maintainer
trialtracker 0.1.7
Methods to extract and transform clinical trial data7 versions - Latest release: over 1 year ago - 34 downloads last month - 2 stars on GitHub - 1 maintainer
Top 7.8% on pypi.org
7 versions - Latest release: about 1 month ago - 1 dependent package - 2 dependent repositories - 1.32 thousand downloads last month - 37 stars on GitHub - 1 maintainer
pytrials 1.0.0
Python wrapper around the clinicaltrials.gov API7 versions - Latest release: about 1 month ago - 1 dependent package - 2 dependent repositories - 1.32 thousand downloads last month - 37 stars on GitHub - 1 maintainer
greent 0.8
Green Team BioMedical Data Translator58 versions - Latest release: over 6 years ago - 3 dependent repositories - 96 downloads last month - 2 stars on GitHub - 1 maintainer
clinical-research-study-manager 1.2.8.dev1
Program to manage some common clinical research tasks from the command line8 versions - Latest release: over 6 years ago - 1 dependent repositories - 19 downloads last month - 0 stars on GitHub - 1 maintainer
pyluna-core 0.3.3
Transformation functions and services for multi-modal oncology data12 versions - Latest release: about 2 years ago - 1 dependent repositories - 46 downloads last month - 34 stars on GitHub - 2 maintainers
pyluna 0.3.3
Transformation functions and services for multi-modal oncology data11 versions - Latest release: about 2 years ago - 1 dependent repositories - 64 downloads last month - 34 stars on GitHub - 2 maintainers
mcl.infirmary 1.2.4
🏥 Infirmary: an API for Clinical Data for the Consortium for Molecular and Cellular Characterizat...13 versions - Latest release: over 1 year ago - 73 downloads last month - 1 stars on GitHub - 1 maintainer
pyluna-radiology 0.3.3
Transformation functions and services for multi-modal oncology data12 versions - Latest release: about 2 years ago - 1 dependent repositories - 68 downloads last month - 34 stars on GitHub - 2 maintainers
varify 0.8.0
Clinical DNA Sequencing Analysis and Data Discovery7 versions - Latest release: over 9 years ago - 2 dependent repositories - 144 downloads last month - 24 stars on GitHub - 1 maintainer
hydra-genetics 2.0.0
Helper tools for use with hydra-genetics pipelines.62 versions - Latest release: about 2 months ago - 23 dependent repositories - 973 downloads last month - 3 stars on GitHub - 1 maintainer
pyluna-common 0.3.3
Transformation functions and services for multi-modal oncology data12 versions - Latest release: about 2 years ago - 1 dependent repositories - 145 downloads last month - 32 stars on GitHub - 2 maintainers
pyluna-pathology 0.3.3
Transformation functions and services for multi-modal oncology data12 versions - Latest release: about 2 years ago - 1 dependent repositories - 58 downloads last month - 34 stars on GitHub - 2 maintainers
edc-model-admin 0.3.73
Edc custom django ModelAdmin mixins, tags and templates for clinicedc/edc projects117 versions - Latest release: 3 months ago - 12 dependent packages - 18 dependent repositories - 883 downloads last month - 1 stars on GitHub - 1 maintainer
edc-egfr 0.3.8
Classes and utils to handle eGFR collection and reporting for clinicedc/edc projects23 versions - Latest release: 3 months ago - 4 dependent packages - 2 dependent repositories - 530 downloads last month - 0 stars on GitHub - 1 maintainer
zensols.dsprov 0.0.1
This library provides integrated MIMIC-III with discharge summary provenance of data annotations ...1 version - Latest release: 12 months ago - 6 downloads last month - 0 stars on GitHub - 1 maintainer
edc-model-fields 0.3.12
Model field classes for clinicedc/edc projects26 versions - Latest release: 4 months ago - 6 dependent packages - 4 dependent repositories - 843 downloads last month - 0 stars on GitHub - 1 maintainer
mcl.sickbay 1.2.4
🤢 Sickbay: Clinical data model for the Consortium for Molecular and Cellular Characterization of ...20 versions - Latest release: over 1 year ago - 2 dependent packages - 125 downloads last month - 1 stars on GitHub - 1 maintainer
clintrials 0.1.4
clintrials is a library of clinical trial designs and methods in Python4 versions - Latest release: over 7 years ago - 2 dependent repositories - 18 downloads last month - 19 stars on GitHub - 1 maintainer
reasoner 0.11
Reasoner common components7 versions - Latest release: over 6 years ago - 4 dependent repositories - 38 downloads last month - 0 stars on GitHub - 1 maintainer
edc-dx-review 0.3.2
Classes to manage review of HIV, DM and HTN diagnoses for clinicedc/edc projects48 versions - Latest release: 6 months ago - 1 dependent package - 2 dependent repositories - 647 downloads last month - 0 stars on GitHub - 2 maintainers
robokop-interfaces 0.91
Translator API11 versions - Latest release: about 6 years ago - 1 dependent repositories - 51 downloads last month - 1 stars on GitHub - 1 maintainer
microsalt 3.0.1
Microbial Sequence Analysis and Loci-based Typing pipeline for use on NGS WGS data.1 version - Latest release: about 4 years ago - 1 dependent repositories - 11 downloads last month - 2 stars on GitHub - 2 maintainers
torchmimic 0.0.6
MIMIC Benchmark in PyTorch.3 versions - Latest release: over 1 year ago - 19 downloads last month - 6 stars on GitHub - 1 maintainer
cohort-compare 0.3.2
A library of functions for comparing clinical cohorts to the populations of US counties16 versions - Latest release: about 4 years ago - 1 dependent repositories - 144 downloads last month - 1 stars on GitHub - 1 maintainer
Related Keywords
trials
10
django
9
clinicedc
7
edc
5
biomedical
5
data
5
clinical-trial-management-system
5
radiology
5
pathology
5
clinical-trials
4
python
4
sequencing
4
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3
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3
cancer
3
mimic-iii
3
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3
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2
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eligibility
2
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2
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2
exome
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diagnostics
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natural-language-processing
2
ICD-10-CM
2
ICD-10
2
icd
2
10
2
CM
2
codes
2
modification
2
icd-10
2
icd-10-clinical-modification
2
icd-10-cm
2
icd-codes
2
icd10
2
icd10cm
2
research
2
length-of-stay
1
ogtt
1
microbial
1
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1
in-hospital-mortality
1
typing
1
management
1
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1
decompensation
1
pip
1
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1
opendata
1
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1
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1
tabular
1
pytrials
1
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1
oncology
1
mapping
1
criteria
1
trial
1
genetics
1
discovery
1
django-field-classes
1
class
1
field
1
orm
1
machine-learning
1
eGFR
1
modeladmin
1
next generation sequencing
1
NGS
1
biology
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1
snakemake
1
hydra-genetics
1
genome
1
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1
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1
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1
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1
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1
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1
ifg
1
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1
pytorch
1
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1
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1
germline-variants
1
exac
1
diseases
1
clinvar
1