Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

pypi.org "imaging" keyword

spatial_image_multiscale 0.4.2
spatial-image-multiscale
6 versions - Latest release: about 2 years ago - 1 dependent repositories - 41 downloads last month - 27 stars on GitHub - 2 maintainers
album-socket 0.1.0
album plugin for controlling album via a socket server
1 version - Latest release: about 2 years ago - 35 downloads last month - 1 maintainer
visiomatic 3.0.0b2
A web application for visualizing astronomical images
3 versions - Latest release: 3 months ago - 97 downloads last month - 32 stars on GitHub - 1 maintainer
labelbox-utils 0.0.3
Utils for working with Labelbox
2 versions - Latest release: over 4 years ago - 1 dependent repositories - 3 downloads last month - 2 maintainers
scikit-surgeryoverlay 0.1.3
scikit-surgeryoverlay
4 versions - Latest release: over 5 years ago - 1 dependent repositories - 29 downloads last month - 2 maintainers
mrsprint 1.2.2
Magnetic resonance experiment simulator and visualization tool.
3 versions - Latest release: almost 6 years ago - 1 dependent repositories - 17 downloads last month - 3 stars on GitLab.com - 1 maintainer
mag1c 1.2.0
A Sparse Matched Filter Algorithm for Atmospheric Trace Gas Concentration Estimation
6 versions - Latest release: almost 4 years ago - 1 dependent repositories - 33 downloads last month - 24 stars on GitHub - 1 maintainer
h5dj 0.1.0
HDF5 interfaces for Django
1 version - Latest release: almost 12 years ago - 2 dependent repositories - 6 downloads last month - 4 stars on GitHub - 1 maintainer
ngff-zarr 0.8.1
A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr impleme...
24 versions - Latest release: 3 months ago - 2 dependent packages - 1 dependent repositories - 1.06 thousand downloads last month - 18 stars on GitHub - 1 maintainer
mesoscopy 0.1.0
Analysis pipeline for rodent widefield calcium imaging data.
28 versions - Latest release: about 1 year ago - 1 dependent repositories - 99 downloads last month - 1 maintainer
smo 2.0.2
Implementation of the Silver Mountain Operator (SMO) for the estimation of background distributions.
5 versions - Latest release: over 1 year ago - 1 dependent repositories - 101 downloads last month - 12 stars on GitHub - 1 maintainer
neunorm 1.6.3
neutron normalization data
32 versions - Latest release: 5 months ago - 1 dependent repositories - 263 downloads last month - 1 stars on GitHub - 1 maintainer
broad-genepy 1.2.6 💰
A useful module for any CompBio
11 versions - Latest release: almost 2 years ago - 86 downloads last month - 18 stars on GitHub - 1 maintainer
cellfinder 1.2.0
Automated 3D cell detection in large microscopy images
100 versions - Latest release: 26 days ago - 3 dependent packages - 1.59 thousand downloads last month - 170 stars on GitHub - 2 maintainers
pymos 0.6.3
Python Mosaic Generator
4 versions - Latest release: almost 14 years ago - 1 dependent repositories - 14 downloads last month - 1 maintainer
thumbor-multidir 0.2.8
Thumbor file loader for multiple paths
9 versions - Latest release: over 4 years ago - 1 dependent repositories - 54 downloads last month - 0 stars on GitHub - 1 maintainer
imagedata-format-ps 0.0.2
Imagedata format plugin for reading PostScript files
2 versions - Latest release: over 2 years ago - 1 dependent repositories - 15 downloads last month - 0 stars on GitHub - 1 maintainer
pytemlib 0.6.2019
pyTEM: TEM Data Quantification library through a model-based approach
74 versions - Latest release: about 5 years ago - 1 dependent repositories - 488 downloads last month - 16 stars on GitHub - 2 maintainers
itk-phasesymmetry 1.0.5
ITK classes for computing phase symmetry using multi-scale steerable filters
5 versions - Latest release: over 2 years ago - 1 dependent repositories - 94 downloads last month - 2 stars on GitHub - 2 maintainers
neutronbraggedge 2.0.6
Bragg Edge work at the SNS
8 versions - Latest release: over 2 years ago - 3 dependent repositories - 110 downloads last month - 0 stars on GitHub - 1 maintainer
scikit-surgery-evaluation 0.0.4
A python library for performing surgical skills evaluation
4 versions - Latest release: over 2 years ago - 1 dependent repositories - 35 downloads last month - 0 stars on GitHub - 2 maintainers
scikit-surgerysurfacematch 0.4.5
Tools for reconstructing and matching surfaces represented as point clouds.
15 versions - Latest release: over 3 years ago - 1 dependent repositories - 29 downloads last month - 2 stars on GitHub - 2 maintainers
exif2timestream-v2 0.12.0
A tool to turn unstructured timelapses into nested directory trees with downsampled images based ...
12 versions - Latest release: over 6 years ago - 1 dependent repositories - 6 downloads last month - 1 stars on GitHub - 1 maintainer
multipropreg 0.1.1
Image registration network using deformation field
2 versions - Latest release: 7 months ago - 8 downloads last month - 0 stars on GitHub - 1 maintainer
Top 1.4% on pypi.org
dipy 1.9.0
Diffusion MRI Imaging in Python
27 versions - Latest release: 3 months ago - 46 dependent packages - 204 dependent repositories - 24.6 thousand downloads last month - 651 stars on GitHub - 4 maintainers
album-server 0.1.0
album plugin for controlling album via a server and REST API
1 version - Latest release: about 2 years ago - 10 downloads last month - 1 stars on GitLab.com - 1 maintainer
pymrt 0.0.1.2
Python Magnetic Resonace Tools
25 versions - Latest release: 10 months ago - 3 dependent repositories - 86 downloads last month - 5 stars on GitHub - 1 maintainer
azcam-lbtguiders 24.1.3 removed
Azcam extension for LBTO lbtguiders cameras
3 versions - Latest release: 3 months ago - 258 downloads last month - 0 stars on GitHub - 1 maintainer
sgext 0.9.16
SGEXT is an open-source toolkit for skeletonization and graph analysis
19 versions - Latest release: over 1 year ago - 1 dependent repositories - 392 downloads last month - 3 stars on GitHub - 1 maintainer
frd-score 0.0.1
Package for calculating Fréchet Radiomics Distance (FRD)
1 version - Latest release: about 1 month ago - 79 downloads last month - 0 stars on GitHub - 1 maintainer
ndjsontosvg 0.0.2
ndjsonTosvg to convert Google Quickdraw data set ndjson format to svg images
2 versions - Latest release: over 2 years ago - 1 dependent repositories - 14 downloads last month - 0 stars on GitHub - 1 maintainer
itk-ioscanco 0.10.0
An ITK module to read and write Scanco microCT .isq files.
12 versions - Latest release: over 1 year ago - 3 dependent repositories - 482 downloads last month - 9 stars on GitHub - 4 maintainers
thumbor-engine-opencv 1.0.0
OpenCV imaging engine for thumbor.
1 version - Latest release: about 6 years ago - 1 dependent repositories - 10 downloads last month - 1 maintainer
remotecv-redis 0.2.3
Redis image loader for remotecv
5 versions - Latest release: over 4 years ago - 1 dependent repositories - 46 downloads last month - 0 stars on GitHub - 1 maintainer
album-distributed 0.1.0
album plugin for running a solution repeatedly and distributed
1 version - Latest release: about 2 years ago - 8 downloads last month - 1 maintainer
psp-scan 0.9
Python package for working with Paintshop Pro files
1 version - Latest release: almost 8 years ago - 1 dependent repositories - 14 downloads last month - 1 stars on GitHub - 1 maintainer
rapyuta 2.2.1
libraRy of Astronomical PYthon UTilities for Astrophysics nerds
8 versions - Latest release: almost 2 years ago - 1 dependent repositories - 45 downloads last month - 0 stars on GitHub - 1 maintainer
compwizard 1.0.3
Creates virtual compounds with properties based on xraylib. Compound wizard is a package from XIS...
5 versions - Latest release: over 2 years ago - 1 dependent repositories - 44 downloads last month - 4 stars on GitHub - 1 maintainer
cykooz.thumbs 0.3.1
WSGI middleware for image resizing
3 versions - Latest release: over 13 years ago - 2 dependent repositories - 9 downloads last month - 1 maintainer
resofit 0.0.5
Fitting tool for neutron resonance imaging
5 versions - Latest release: over 6 years ago - 1 dependent repositories - 43 downloads last month - 0 stars on GitHub - 2 maintainers
py_razor_client 0.1.2
A simple Python library for interacting with Razor
3 versions - Latest release: over 10 years ago - 2 dependent repositories - 14 downloads last month - 2 stars on GitHub - 1 maintainer
spe2py 2.0.0
This module imports a Princeton Instruments LightField (SPE 3.0) file into a python environment.
1 version - Latest release: about 6 years ago - 1 dependent repositories - 214 downloads last month - 14 stars on GitHub - 1 maintainer
yunguanfu-mil3id2019 0.0.1
Implements Yunguan Fu's MIL3ID paper presented at MICCAI 2019
1 version - Latest release: almost 5 years ago - 1 dependent repositories - 5 downloads last month - 2 maintainers
ganx 0.0.2
The GitHub repository for the Python package ganX - generate artificially new XRF
1 version - Latest release: over 1 year ago - 9 downloads last month - 0 stars on GitHub - 1 maintainer
neutronimaging 1.2
Neutron Imaging Reduction
1 version - Latest release: over 3 years ago - 1 dependent repositories - 12 downloads last month - 1 maintainer
pymaging-psd 0.5.1
PSD support for Pymaging
4 versions - Latest release: over 11 years ago - 2 dependent repositories - 14 downloads last month - 9 stars on GitHub - 1 maintainer
hdf5-django 0.1.2
HDF5 interfaces for Django
2 versions - Latest release: almost 12 years ago - 2 dependent repositories - 31 downloads last month - 4 stars on GitHub - 1 maintainer
imaging-research 0.1.1
Medical Imaginging Research structuring and automation
18 versions - Latest release: about 1 month ago - 206 downloads last month - 0 stars on GitHub - 1 maintainer
spydcmtk 1.1.6
Simple python dicom toolkit.
9 versions - Latest release: 2 months ago - 1 dependent package - 1 dependent repositories - 54 downloads last month - 0 stars on GitHub - 1 maintainer
hdi-utils 0.0.3
High-dimensional image data utilities
4 versions - Latest release: about 3 years ago - 1 dependent repositories - 28 downloads last month - 0 stars on GitHub - 1 maintainer
imagedisplayqt 1.1.0
A widget for real time image display in PyQT GUIs.
4 versions - Latest release: 3 months ago - 16 downloads last month - 1 stars on GitHub - 1 maintainer
tornado_thumbor_url 0.1.1
tornado-thumbor-url is a python extension to tornado for encrypted thumbor url generation
2 versions - Latest release: over 11 years ago - 2 dependent repositories - 23 downloads last month - 2 stars on GitHub - 1 maintainer
ifcimglib 0.1.3
Library containing read, and preprocessing functions for imaging flow cytometry images contained ...
6 versions - Latest release: almost 3 years ago - 1 dependent repositories - 36 downloads last month - 1 maintainer
hmivae
hmiVAE: highly multiplexed imaging Variational AutoEncoder
1 version
color_detection 0.1.1
A project based on color detection in natural images
1 version - Latest release: 10 months ago - 0 stars on GitHub - 1 maintainer
graphicsmagick_engine 0.1.1
GraphicsMagick imaging engine for thumbor.
2 versions - Latest release: about 10 years ago - 2 dependent repositories - 845 downloads last month - 1 maintainer
iw.thumbs 1.2
A wsgi middleware to generate and serve image thumbnails.
4 versions - Latest release: over 15 years ago - 3 dependent repositories - 23 downloads last month - 2 maintainers
scikit-surgerytf 0.2.1
scikit-surgerytf is a Python package for Tensor Flow examples and utilities
3 versions - Latest release: about 2 years ago - 1 dependent repositories - 93 downloads last month - 1 stars on GitHub - 2 maintainers
Top 7.0% on pypi.org
pyabel 0.9.0
A Python package for forward and inverse Abel transforms
16 versions - Latest release: over 1 year ago - 4 dependent packages - 4 dependent repositories - 630 downloads last month - 89 stars on GitHub - 1 maintainer
polarityjam 0.2.1
Feature extraction pipeline for vascular cell data
9 versions - Latest release: about 1 month ago - 1 dependent package - 198 downloads last month - 2 stars on GitHub - 2 maintainers
mymi 0.0.1
Medical imaging code
1 version - Latest release: over 3 years ago - 1 dependent repositories - 12 downloads last month - 0 stars on GitHub - 1 maintainer
Top 9.8% on pypi.org
pyxel-sim 2.1.1
Pyxel detector simulation framework.
53 versions - Latest release: 3 months ago - 1 dependent package - 2 dependent repositories - 359 downloads last month - 8 stars on GitLab.com - 3 maintainers
pept 0.5.1
A Python library that unifies Positron Emission Particle Tracking (PEPT) research, including trac...
16 versions - Latest release: over 1 year ago - 2 dependent repositories - 189 downloads last month - 12 stars on GitHub - 1 maintainer
thirdlight 0.1.0
Python API library for the ThirdLight image management system
1 version - Latest release: over 11 years ago - 2 dependent repositories - 9 downloads last month - 2 stars on GitHub - 1 maintainer
py-eyepi 0.2.8
a tool to capture images from dslrs and raspberry pi cameras
22 versions - Latest release: about 5 years ago - 1 dependent repositories - 44 downloads last month - 1 stars on GitHub - 1 maintainer
pylsci 1.1.1
Python Package for Laser Speckle Contrast Imaging
5 versions - Latest release: almost 2 years ago - 1 dependent repositories - 22 downloads last month - 13 stars on GitHub - 1 maintainer
scip-workflows 0.1.2
3 versions - Latest release: over 1 year ago - 18 downloads last month - 1 maintainer
roibuddy 1.0.1
GUI for editing segmentations when using SIMA
3 versions - Latest release: almost 8 years ago - 3 dependent repositories - 37 downloads last month - 3 maintainers
tttrlib 0.24.3
Read, write & process time-tagged time-resolved (TTTR) data.
5 versions - Latest release: 4 months ago - 160 downloads last month - 18 stars on GitHub - 1 maintainer
scikit-surgeryutils 2.0.0
scikit-surgeryutils - Tests/demos utilities, based around opencv-contrib-python-headless and PySide6
23 versions - Latest release: 12 months ago - 1 dependent package - 5 dependent repositories - 202 downloads last month - 3 stars on GitHub - 2 maintainers
thumbor-vips-engine 0.1.1
thumbor libvips engine
2 versions - Latest release: over 2 years ago - 1 dependent repositories - 15 downloads last month - 3 stars on GitHub - 2 maintainers
scikit-surgeryarucotracker 1.0.3
scikit-surgeryarucotracker is a simple tracking interface using ARuCo markers
22 versions - Latest release: about 1 year ago - 2 dependent packages - 7 dependent repositories - 159 downloads last month - 0 stars on GitHub - 2 maintainers
scikit-surgeryspeech 0.3.2
Interface to speech services for image-guided surgery.
12 versions - Latest release: over 2 years ago - 1 dependent repositories - 56 downloads last month - 0 stars on GitHub - 2 maintainers
remotecv-multidir 0.1.1
RemoteCV image loader from multiple local directories
2 versions - Latest release: over 4 years ago - 1 dependent repositories - 18 downloads last month - 0 stars on GitHub - 1 maintainer
album-environments 0.2.2
Album unifies computational tools across frameworks, languages, and environments.
4 versions - Latest release: 9 months ago - 39 downloads last month - 0 stars on GitLab.com - 1 maintainer
bronchipy 0.2.0
Supporting tools for processing the output of the AirFlow pipeline.
11 versions - Latest release: 10 months ago - 53 downloads last month - 1 maintainer
Top 5.9% on pypi.org
pylibjpeg-openjpeg 2.2.1
A Python wrapper for openjpeg, with a focus on use as a plugin for for pylibjpeg
14 versions - Latest release: 3 months ago - 11 dependent packages - 31 dependent repositories - 54.1 thousand downloads last month - 18 stars on GitHub - 3 maintainers
colonyscanalyser 0.6.2
An image analysis tool for measuring microorganism colony growth
18 versions - Latest release: over 3 years ago - 1 dependent repositories - 55 downloads last month - 11 stars on GitHub - 1 maintainer
Top 9.6% on pypi.org
starfish 0.2.2
Pipelines and pipeline components for the analysis of image-based transcriptomics data
48 versions - Latest release: about 3 years ago - 1 dependent package - 5 dependent repositories - 177 downloads last month - 220 stars on GitHub - 3 maintainers
Top 6.0% on pypi.org
ehtim 1.2.8
Imaging, analysis, and simulation software for radio interferometry
7 versions - Latest release: about 2 months ago - 3 dependent repositories - 1.45 thousand downloads last month - 5,280 stars on GitHub - 1 maintainer
Top 2.2% on pypi.org
pyradiomics 3.1.0
Radiomics features library for python
10 versions - Latest release: about 1 year ago - 22 dependent packages - 60 dependent repositories - 10.9 thousand downloads last month - 99 stars on GitHub - 1 maintainer
qrpic 0.3
Create beautiful QR-codes with perfectly fitting logos!
3 versions - Latest release: almost 3 years ago - 1 dependent repositories - 19 downloads last month - 2 stars on GitLab.com - 1 maintainer
biorad1sc-reader 0.7.0
Allows reading Bio-Rad *.1sc image/analysis files.
9 versions - Latest release: over 3 years ago - 1 dependent repositories - 73 downloads last month - 3 stars on GitHub - 1 maintainer
pylibczirw 4.1.0 💰
A python wrapper around the libCZI C++ library with reading and writing functionality.
16 versions - Latest release: 5 months ago - 1 dependent package - 1 dependent repositories - 1.91 thousand downloads last month - 9,307 stars on GitHub - 1 maintainer
scikit-surgeryfred 0.1.5
FRED provides an interactive demonstration of fiducial based registration for teaching purposes
15 versions - Latest release: over 2 years ago - 2 dependent repositories - 46 downloads last month - 3 stars on GitHub - 2 maintainers
Top 9.3% on pypi.org
scikit-surgerynditracker 1.0.1
Interface for Northern Digital (NDI) Trackers with data to NumPy arrays
30 versions - Latest release: 4 months ago - 1 dependent package - 4 dependent repositories - 544 downloads last month - 38 stars on GitHub - 2 maintainers
calcium-inference 0.0.1
Package for inferring latent calcium activity from two-channel imaging
1 version - Latest release: over 2 years ago - 1 dependent repositories - 22 downloads last month - 1 maintainer
nidmviewer 0.1.3 💰
command line or server tool to view or compare nidm results.
3 versions - Latest release: about 8 years ago - 2 dependent repositories - 10 downloads last month - 3 stars on GitHub - 1 maintainer
scikit-surgeryfredbackend 0.0.6
FRED provides an interactive demonstration of fiducial based registration for teaching purposes
1 version - Latest release: over 3 years ago - 1 dependent repositories - 18 downloads last month - 0 stars on GitHub - 1 maintainer
bioimage 0.1.3
bioimage - library to make working with biomedical images more comfortable
14 versions - Latest release: over 2 years ago - 1 dependent repositories - 72 downloads last month - 1 maintainer
codedapertures 0.7.1
a python package for generating coded apertures
12 versions - Latest release: 10 months ago - 58 downloads last month - 10 stars on GitHub - 1 maintainer
python-image-complete 0.0.5
Python3 library for checking whether images are complete.
5 versions - Latest release: about 1 year ago - 2 dependent repositories - 37 downloads last month - 0 stars on GitHub - 1 maintainer
simtk 0.1.0
sim: structured illumination microscopy
1 version - Latest release: over 3 years ago - 2 dependent repositories - 324 downloads last month - 4 stars on GitHub - 1 maintainer
cytoself 0.0.0
An image feature extractor with self-supervised learning
5 versions - Latest release: about 3 years ago - 31 downloads last month - 69 stars on GitHub - 2 maintainers
Top 3.0% on pypi.org
dicom 0.9.9.post1 💰
Pure python package for DICOM medical file reading and writing
1 version - Latest release: over 7 years ago - 2 dependent packages - 66 dependent repositories - 1.61 thousand downloads last month - 1,830 stars on GitHub - 1 maintainer
bcdi 0.3.1
BCDI: tools for pre(post)-processing Bragg and
24 versions - Latest release: about 1 year ago - 2 dependent repositories - 175 downloads last month - 22 stars on GitHub - 1 maintainer
ril 0.4.0
Rust Imaging Library's Python binding: A performant and high-level image processing library for P...
1 version - Latest release: over 1 year ago - 1 dependent package - 160 downloads last month - 27 stars on GitHub - 1 maintainer
copyxnat 0.9.6
CopyXnat is a python utility for copying XNAT projects from one XNAT server to another
65 versions - Latest release: almost 3 years ago - 1 dependent repositories - 98 downloads last month - 3 stars on GitHub - 1 maintainer
occam 0.1.4
A web frontend for the Razor imaging server.
4 versions - Latest release: about 10 years ago - 2 dependent repositories - 16 downloads last month - 0 stars on GitHub - 1 maintainer
scikit-surgeryimage 0.10.1
scikit-surgeryimage implements image processing tools and alogrithms for Image Guided Surgery.
45 versions - Latest release: about 2 years ago - 3 dependent packages - 8 dependent repositories - 555 downloads last month - 1 stars on GitHub - 2 maintainers
Related Keywords
python 68 medical 64 itk 43 insight-toolkit 38 open-science 35 itk-module 32 vtk 30 astronomy 27 wasm 27 wasi 27 reproducible-science 27 javascript 27 input-output 27 asmjs 27 webassembly 27 emscripten 27 itkwasm 25 ccd 22 sensors 20 image 19 medical-imaging 16 dicom 16 scikit-surgery 15 opencv 15 scientific 14 visualization 14 hacktoberfest 14 thumbor 13 ITK 13 InsightToolkit 13 microscopy 13 mri 12 detection 12 imagemagick 12 image-processing 12 face 11 data analysis 11 feature 11 thumbnail 11 environments 10 scientific-computing 10 image-analysis 10 virtual 10 pil 10 ucl 10 pydicom 8 open-source 8 reproducible-research 8 cpp 8 segmentation 8 numpy 7 neuroscience 7 spectroscopy 7 numfocus 7 multidimensional 6 spectra 6 storage 6 surgery 5 registration 5 ultrasound 5 simulation 5 neutron 5 analysis 5 research 5 machine-learning 5 processing 4 pillow 4 jpeg 4 data 4 MRI 4 opencv-python 4 tomography 4 fluorescence 4 neuroimaging 4 deep-learning 4 loader 4 hdf5 4 ome-zarr-converter 4 aruco 4 reconstruction 4 pet 4 ct 3 pytorch 3 observatory 3 bioinformatics 3 nifti 3 cnn 3 brain 3 vtk-applications 3 deformation 3 universal 3 calcium 3 biology 3 quantitative 3 optics 3 data format 3 diffraction 3 conversion 3 emission 3 development 3