Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
cran.r-project.org "genomics" keyword
symDMatrix 2.1.1
Partitioned Symmetric Matrices6 versions - Latest release: almost 4 years ago - 1 dependent package - 1 dependent repositories - 332 downloads last month - 2 stars on GitHub - 1 maintainer
coca 1.1.0
Cluster-of-Clusters Analysis2 versions - Latest release: almost 4 years ago - 1 dependent package - 2 dependent repositories - 275 downloads last month - 4 stars on GitHub - 1 maintainer
klic 1.0.4
Kernel Learning Integrative Clustering2 versions - Latest release: almost 4 years ago - 200 downloads last month - 5 stars on GitHub - 1 maintainer
rCNV 1.2.0
Detect Copy Number Variants from SNPs Data3 versions - Latest release: 10 months ago - 266 downloads last month - 5 stars on GitHub - 1 maintainer
macrosyntR 0.3.3
Draw Ordered Oxford Grids and Chord Diagrams3 versions - Latest release: 6 months ago - 182 downloads last month - 10 stars on GitHub - 1 maintainer
seqR 1.0.1 removed
Fast and Comprehensive K-Mer Counting Package2 versions - Latest release: over 2 years ago - 1 dependent repositories - 11 stars on GitHub
BEDMatrix 2.0.3
Extract Genotypes from a PLINK .bed File12 versions - Latest release: almost 4 years ago - 9 dependent packages - 11 dependent repositories - 1.04 thousand downloads last month - 15 stars on GitHub - 1 maintainer
TopDom 0.10.1
An Efficient and Deterministic Method for Identifying Topological Domains in Genomes1 version - Latest release: about 3 years ago - 3 dependent packages - 1 dependent repositories - 214 downloads last month - 17 stars on GitHub - 1 maintainer
ClustAssess 0.3.0
Tools for Assessing Clustering3 versions - Latest release: over 2 years ago - 311 downloads last month - 18 stars on GitHub - 1 maintainer
kgp 1.1.1
1000 Genomes Project Metadata3 versions - Latest release: over 1 year ago - 187 downloads last month - 19 stars on GitHub - 1 maintainer
graphsim 1.0.3
Simulate Expression Data from 'igraph' Networks5 versions - Latest release: over 1 year ago - 1 dependent package - 2 dependent repositories - 494 downloads last month - 21 stars on GitHub - 1 maintainer
OmicNavigator 1.13.13
Open-Source Software for 'Omic' Data Analysis and Visualization6 versions - Latest release: 9 months ago - 316 downloads last month - 21 stars on GitHub - 1 maintainer
BGData 2.4.1
A Suite of Packages for Analysis of Big Genomic Data7 versions - Latest release: about 1 year ago - 2 dependent packages - 3 dependent repositories - 407 downloads last month - 33 stars on GitHub - 1 maintainer
JBrowseR 0.10.2
An R Interface to the JBrowse 2 Genome Browser8 versions - Latest release: 5 months ago - 1 dependent package - 2 dependent repositories - 390 downloads last month - 34 stars on GitHub - 1 maintainer
AlphaSimR 1.5.3
Breeding Program Simulations22 versions - Latest release: 6 months ago - 2 dependent packages - 5 dependent repositories - 37 stars on GitHub - 1 maintainer
Top 7.5% on cran.r-project.org
7 versions - Latest release: about 2 years ago - 13 dependent packages - 66 dependent repositories - 5.93 thousand downloads last month - 64 stars on GitHub - 1 maintainer
msigdbr 7.5.1
MSigDB Gene Sets for Multiple Organisms in a Tidy Data Format7 versions - Latest release: about 2 years ago - 13 dependent packages - 66 dependent repositories - 5.93 thousand downloads last month - 64 stars on GitHub - 1 maintainer
tidygenomics 0.1.2
Tidy Verbs for Dealing with Genomic Data Frames3 versions - Latest release: almost 5 years ago - 214 downloads last month - 101 stars on GitHub - 1 maintainer
Top 7.6% on cran.r-project.org
6 versions - Latest release: 9 months ago - 9 dependent packages - 13 dependent repositories - 5.36 thousand downloads last month - 147 stars on GitHub - 1 maintainer
qqman 0.1.9
Q-Q and Manhattan Plots for GWAS Data6 versions - Latest release: 9 months ago - 9 dependent packages - 13 dependent repositories - 5.36 thousand downloads last month - 147 stars on GitHub - 1 maintainer
Top 6.0% on cran.r-project.org
21 versions - Latest release: 6 months ago - 3 dependent packages - 7 dependent repositories - 1.88 thousand downloads last month - 202 stars on GitHub - 1 maintainer
biomartr 1.0.7
Genomic Data Retrieval21 versions - Latest release: 6 months ago - 3 dependent packages - 7 dependent repositories - 1.88 thousand downloads last month - 202 stars on GitHub - 1 maintainer
Top 6.6% on cran.r-project.org
16 versions - Latest release: 6 months ago - 25 dependent packages - 55 dependent repositories - 7.22 thousand downloads last month - 233 stars on GitHub - 1 maintainer
vcfR 1.15.0
Manipulate and Visualize VCF Data16 versions - Latest release: 6 months ago - 25 dependent packages - 55 dependent repositories - 7.22 thousand downloads last month - 233 stars on GitHub - 1 maintainer
Top 7.9% on cran.r-project.org
43 versions - Latest release: 7 months ago - 5 dependent packages - 6 dependent repositories - 977 downloads last month - 286 stars on GitHub - 1 maintainer
canvasXpress 1.46.9
Visualization Package for CanvasXpress in R43 versions - Latest release: 7 months ago - 5 dependent packages - 6 dependent repositories - 977 downloads last month - 286 stars on GitHub - 1 maintainer
Related Keywords
r
12
cran
9
genetics
6
bioinformatics
6
r-package
3
visualization
3
clustering
3
r-pkg
3
rstats
2
population-genetics
2
cluster-analysis
2
shiny
2
package
2
rcpp
2
gwas
2
r-stats
2
multi-omics
2
integrative-clustering
2
coca
2
biomart
1
database-retrieval
1
ensembl-servers
1
tidy
1
intervals
1
pathways
1
pathway-analysis
1
msigdb
1
gsea
1
gene-sets
1
enrichment-analysis
1
simulation
1
breeding
1
rcppparallel
1
rmarkdown
1
reactjs
1
opencpu
1
omics
1
reproducible-research
1
python
1
network-visualization
1
network
1
javascript
1
graphs
1
data-visualization
1
data-science
1
data-analytics
1
dashboard
1
dash
1
charting
1
chart
1
analytics
1
vcf-data
1
population-genomics
1
sequenced-genomes
1
proteome
1
peer-reviewed
1
ncbi-genbank
1
metagenomics
1
meta-analysis
1
genome-retrieval
1
genome-annotation
1
genome
1
protein-sequences
1
ngrams
1
ngram
1
kmers
1
kmer-frequency-count
1
kmer-counting
1
kmer
1
k-mer-counting
1
k-mer
1
hashing-algorithms
1
hashing
1
feature-extraction
1
feature-engineering
1
dna-processing
1
bioinformatics-tool
1
genomic-visualizations
1
snps
1
landscape-genetics
1
gene-duplication
1
copy-number-variation
1
cnv-analysis
1
kernel-methods
1
cluster-of-clusters
1
simulation-modeling
1
simulated-data
1
ngs-analysis
1
joss
1
igraph-networks
1
graph-algorithms
1
genomic-data-analysis
1
gene-regulatory-networks
1
gene-expression
1
benchmarking
1
sequencing
1
metadata
1
1000genomes
1
unsupervised-learning
1
single-cell
1