crates.io "sequence-alignment" keyword
bistring 0.0.0
Bidirectionally transformed strings1 version - Latest release: over 4 years ago - 1.75 thousand downloads total - 369 stars on GitHub - 1 maintainer
kira-ls-aligner 0.1.1
Unified short- and long-read sequence aligner written in Rust 2024. It combines minimap2-style mi...2 versions - Latest release: 20 days ago - 26 downloads total - 1 stars on GitHub - 1 maintainer
abpoa-sys 0.1.1
Automatically generated FFI definitions for abPOA2 versions - Latest release: over 1 year ago - 2.92 thousand downloads total - 4 stars on GitHub - 1 maintainer
ksw2rs 0.1.3
Native Rust port of ksw2 (ksw2_extz2_sse) with stable-Rust SIMD backends1 version - Latest release: 8 days ago - 0 downloads total - 0 stars on GitHub - 1 maintainer
abpoa-rs 0.2.0
Rust bindings for abPOA: Adaptive Banded POA3 versions - Latest release: over 1 year ago - 3.6 thousand downloads total - 4 stars on GitHub - 1 maintainer
seal 0.1.6
Implementation of Needleman-Wunsch & Smith-Waterman sequence alignment.7 versions - Latest release: 9 months ago - 1 dependent package - 1 dependent repositories - 23.6 thousand downloads total - 21 stars on GitHub - 1 maintainer
minimap2 0.1.31+minimap2.2.30
Bindings to libminimap226 versions - Latest release: 15 days ago - 1 dependent package - 1 dependent repositories - 36.1 thousand downloads total - 108 stars on GitHub - 1 maintainer
minimap2-sys 0.1.30+minimap2.2.30
Bindings to libminimap224 versions - Latest release: about 2 months ago - 1 dependent package - 1 dependent repositories - 45.5 thousand downloads total - 100 stars on GitHub - 1 maintainer
cyanea-align 0.1.0
Sequence alignment algorithms for the Cyanea bioinformatics ecosystem1 version - Latest release: 17 days ago - 0 downloads total - 1 maintainer
kira-fastq 0.1.0
High-performance FASTQ reader with mmap-first design. Supports plain, gzip, and BGZF inputs; opti...1 version - Latest release: 21 days ago - 0 downloads total - 1 maintainer
libparasail-sys 0.2.0
Unsafe Rust bindings for the parasail C library14 versions - Latest release: 2 months ago - 1 dependent package - 18.9 thousand downloads total - 2 stars on GitHub - 1 maintainer
parasail-rs 0.9.0
Rust bindings and wrapper for parasail, a SIMD C library for pairwise sequence alignment.23 versions - Latest release: about 2 months ago - 25.2 thousand downloads total - 2 stars on GitHub - 1 maintainer
mzalign 0.1.0
Align peptidoforms while with mass-based alignment.1 version - Latest release: 4 months ago - 31 downloads total - 37 stars on GitHub - 1 maintainer
kbo-cli 0.2.1
Command-line interface to the kbo local aligner.4 versions - Latest release: 11 months ago - 2.85 thousand downloads total - 3 stars on GitHub - 1 maintainer
pseqsid 1.0.2
Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in ...5 versions - Latest release: about 2 years ago - 6.46 thousand downloads total - 17 stars on GitHub - 1 maintainer
sigalign 0.4.1
A Similarity-Guided Alignment Algorithm11 versions - Latest release: 10 months ago - 13 thousand downloads total - 27 stars on GitHub - 1 maintainer
kbo 0.5.1
Local alignment search with k-bounded matching statistics.5 versions - Latest release: 11 months ago - 4.32 thousand downloads total - 15 stars on GitHub - 1 maintainer
minimap2-temp 0.1.33+minimap2.2.28
Bindings to libminimap24 versions - Latest release: 9 months ago - 3.71 thousand downloads total - 105 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
14
alignment
8
rust
7
genomics
7
ffi
5
spliced-alignment
3
minimap2
3
longread
3
simd
3
fastq
3
fasta
3
bio
2
parasail
2
smith-waterman
2
needleman-wunsch
2
kbo
2
poa
2
graph-alignment
2
sbwt
2
dna
2
nlp
2
similarity-score
1
multiple-sequence-alignment
1
protein-sequences
1
normalized-similarity-score
1
nucleotide
1
algorithm
1
next-generation-sequencing
1
ngs
1
identity
1
similarity
1
mass-spectrometry
1
ffi-bindings
1
ksw2
1
sam
1
string
1
text
1