Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
crates.io "dna" keyword
blutils
A utility to make it easier to run and analyze Blast results6 versions - Latest release: about 1 month ago - 1.62 thousand downloads total - 2 stars on GitHub - 1 maintainer
nucleobases 1.1.0
A simple, low-level brick crate for managing nucleobases as data in code2 versions - Latest release: over 3 years ago - 859 downloads total - 0 stars on GitHub - 1 maintainer
nucleob 1.1.1 💰
bioinformatics: nucleobases and amino acids statistics5 versions - Latest release: over 1 year ago - 1.53 thousand downloads total - 0 stars on GitHub - 1 maintainer
Top 9.4% on crates.io
3 versions - Latest release: over 2 years ago - 6 dependent packages - 7 dependent repositories - 27.1 thousand downloads total - 63 stars on GitHub - 1 maintainer
debruijn 0.3.4
Tools for DNA sequences: efficient k-mer manipulation, De Bruijn graph construction and compactio...3 versions - Latest release: over 2 years ago - 6 dependent packages - 7 dependent repositories - 27.1 thousand downloads total - 63 stars on GitHub - 1 maintainer
prot_translate 0.1.0
Translate nucleotide sequence to protein.1 version - Latest release: about 1 month ago - 224 downloads total - 1 maintainer
bio-seq 0.12.4
Bit packed and well-typed biological sequences13 versions - Latest release: 5 days ago - 1 dependent package - 3.41 thousand downloads total - 16 stars on GitHub - 1 maintainer
seal 0.1.5
Implementation of Needleman-Wunsch & Smith-Waterman sequence alignment.6 versions - Latest release: about 2 years ago - 1 dependent package - 1 dependent repositories - 12.3 thousand downloads total - 18 stars on GitHub - 1 maintainer
li_stephens_py_hkhan 0.1.1
Python bindings of the li-stevens crate to allow calling the rust code from python2 versions - Latest release: almost 2 years ago - 650 downloads total - 0 stars on GitHub - 1 maintainer
rexdna
Regular Expressions optimized for DNA.1 version - Latest release: 8 days ago - 295 downloads total - 0 stars on GitHub - 1 maintainer
disambiseq 0.1.10
Create unambiguous one-off mismatch libraries for DNA sequences11 versions - Latest release: 11 months ago - 3 dependent packages - 3.72 thousand downloads total - 0 stars on GitHub - 1 maintainer
ncrs 0.1.1 💰
A lightweight Rust library for loading and storing nucleic acid sequences (DNA or RNA) and their ...2 versions - Latest release: over 4 years ago - 1.01 thousand downloads total - 0 stars on GitHub - 1 maintainer
protein-translate 0.2.0
Translate nucleotide sequence to protein.4 versions - Latest release: almost 5 years ago - 1 dependent repositories - 2.82 thousand downloads total - 5 stars on GitHub - 1 maintainer
genome 0.3.0
A simple package used to generate DNA used for GAN generator4 versions - Latest release: 2 months ago - 1 dependent repositories - 2.34 thousand downloads total - 1 stars on GitHub - 1 maintainer
fxread 0.2.12
A barebones fastx reader for rust19 versions - Latest release: 5 months ago - 5 dependent packages - 7.42 thousand downloads total - 0 stars on GitHub - 1 maintainer
li-stephens 0.1.0
An implementation of the Li+Stephens model for predicting the likelihood of a test sequence given...1 version - Latest release: almost 2 years ago - 1 dependent package - 1 dependent repositories - 892 downloads total - 0 stars on GitHub - 1 maintainer
jean_cut 0.1.0
Codon usage tables feature for jean1 version - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 601 downloads total - 0 stars on GitHub - 1 maintainer
umgap 1.1.0
The Unipept Metagenomics Analysis Pipeline4 versions - Latest release: 3 months ago - 1.65 thousand downloads total - 10 stars on GitHub - 1 maintainer
jean_blosum 0.1.0
BLOSUM feature for jean1 version - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 602 downloads total - 0 stars on GitHub - 1 maintainer
jean_core 0.1.0
Core package of jean1 version - Latest release: over 1 year ago - 6 dependent packages - 1 dependent repositories - 1.88 thousand downloads total - 0 stars on GitHub - 1 maintainer
jean_io 0.1.0
I/O library feature for jean1 version - Latest release: over 1 year ago - 2 dependent packages - 1 dependent repositories - 816 downloads total - 0 stars on GitHub - 1 maintainer
jean_alignment 0.1.0
Sequence alignment feature for jean1 version - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 590 downloads total - 0 stars on GitHub - 1 maintainer
multi-seq-align 0.2.0
Manipulate multiple sequence alignments (DNA/protein).2 versions - Latest release: over 3 years ago - 868 downloads total - 4 stars on GitHub - 1 maintainer
ncbi 0.2.0-beta
Rust data structures for NCBI APIs2 versions - Latest release: 10 months ago - 599 downloads total - 1 stars on GitHub - 1 maintainer
jean_macros 0.1.0
Macro library feature for jean1 version - Latest release: over 1 year ago - 1 dependent repositories - 334 downloads total - 0 stars on GitHub - 1 maintainer
jean 0.1.0
Computational biology utility library for Rust featuring sequence alignment, genome annotation, a...1 version - Latest release: over 1 year ago - 1 dependent repositories - 348 downloads total - 0 stars on GitHub - 1 maintainer
sdust 0.1.0
Implementation of symmetric DUST algorithm, with optional CLI1 version - Latest release: about 2 years ago - 854 downloads total - 2 maintainers
nucleic-acid 0.1.1
Implementations of Suffix Array, Burrows-Wheeler Transform and FM-index2 versions - Latest release: almost 7 years ago - 1.72 thousand downloads total - 17 stars on GitHub - 1 maintainer
frag_gene_scan_rs 1.1.0
Rust implementation of the gene prediction model for short and error-prone reads2 versions - Latest release: over 2 years ago - 780 downloads total - 23 stars on GitHub - 1 maintainer
blutils-proc-adapter 8.2.0
A utility to make it easier to run and analyze Blast results30 versions - Latest release: about 2 months ago - 1 dependent package - 8.31 thousand downloads total - 2 stars on GitHub - 1 maintainer
blutils-core 8.2.0
A utility to make it easier to run and analyze Blast results31 versions - Latest release: about 2 months ago - 3 dependent packages - 8.82 thousand downloads total - 2 stars on GitHub - 1 maintainer
blutils-cli 8.2.0
The CLI port of the blutils library29 versions - Latest release: about 2 months ago - 7.66 thousand downloads total - 2 stars on GitHub - 1 maintainer
blutils-adapters
A utility to make it easier to run and analyze Blast results1 version - Latest release: 30 days ago - 219 downloads total - 2 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
17
protein
12
rna
11
biology
10
genetics
10
computational-biology
8
genes
7
ncbi
6
blast
5
bioinformativs
5
similarity-analysis
5
rust
3
genomics
3
bio
3
sequencing
3
sequence-alignments
2
alignment
2
sequence
2
translate
2
kmer
2
fasta
1
gff3
1
blosum
1
msa
1
evolution
1
rustlang
1
matrix
1
nucleobases
1
parser
1
asn1
1
ncbi-database
1
synthetic-biology
1
vector
1
bwt
1
index
1
search
1
gene
1
gene-prediction
1
hidden-markov-model
1
rust-lang
1
short-reads
1
graph
1
debruijn
1
iupac
1
smith-waterman
1
needleman-wunsch
1
sequence-alignment
1
nlp
1
pythonbindings
1
expressions
1
utility
1
regexp
1
regular
1
mismatch
1
gff
1
library
1
random
1
genome
1
codons
1
cut
1
metagenomics
1
unipept
1
transcriptonomics
1
taxonomy
1