Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "biomedical" keyword
bio-volumentations 1.2.0
Library for 3D-5D augmentations of volumetric multi-dimensional biomedical images and their annot...7 versions - Latest release: 12 days ago - 163 downloads last month - 1,968 stars on GitHub - 2 maintainers
bent 0.0.62
BENT: Biomedical Entity Annotator52 versions - Latest release: 1 day ago - 1 dependent repositories - 1.92 thousand downloads last month - 9 stars on GitHub - 1 maintainer
aidlabsdk 1.7.1
Comprehensive SDK for integrating Aidlab's and Aidmed One's biofeedback and biosignal processing ...27 versions - Latest release: 2 months ago - 201 downloads last month - 1 maintainer
Top 1.8% on pypi.org
15 versions - Latest release: 2 months ago - 17 dependent packages - 178 dependent repositories - 26.6 thousand downloads last month - 1,601 stars on GitHub - 3 maintainers
scispacy 0.5.4
A full SpaCy pipeline and models for scientific/biomedical documents.15 versions - Latest release: 2 months ago - 17 dependent packages - 178 dependent repositories - 26.6 thousand downloads last month - 1,601 stars on GitHub - 3 maintainers
bioxelnodes 0.1.1
For scientific volumetric data visualization in Blender.1 version - Latest release: 4 days ago - 205 downloads last month - 116 stars on GitHub - 1 maintainer
cell-data-loader 0.0.7
Converts general images of cells into formats and labels for deep learning pipelines7 versions - Latest release: 5 days ago - 183 downloads last month - 0 stars on GitHub - 1 maintainer
Top 7.2% on pypi.org
37 versions - Latest release: 24 days ago - 2 dependent packages - 4 dependent repositories - 975 downloads last month - 185 stars on GitHub - 1 maintainer
biocypher 0.5.42
A unifying framework for biomedical research knowledge graphs37 versions - Latest release: 24 days ago - 2 dependent packages - 4 dependent repositories - 975 downloads last month - 185 stars on GitHub - 1 maintainer
unet-torch 0.0.2 💰
unet - Pytorch2 versions - Latest release: 8 months ago - 35 downloads last month - 5 stars on GitHub - 1 maintainer
zensols.dsprov 0.0.1
This library provides integrated MIMIC-III with discharge summary provenance of data annotations ...1 version - Latest release: 11 months ago - 7 downloads last month - 0 stars on GitHub - 1 maintainer
zensols.mimicsid 1.7.0
Use the MedSecId section annotations with MIMIC-III corpus parsing.12 versions - Latest release: 2 months ago - 1 dependent package - 92 downloads last month - 2 stars on GitHub - 1 maintainer
bio-epidemiology-ner 0.1.3
Recognize bio-medical entities from a text corpus13 versions - Latest release: almost 2 years ago - 297 downloads last month - 91 stars on GitHub - 3 maintainers
drug-named-entity-recognition 1.0.3
Drug Named Entity Recognition library to find and resolve drug names in a string (drug named enti...5 versions - Latest release: about 1 month ago - 11.6 thousand downloads last month - 14 stars on GitHub - 1 maintainer
ros-translator 0.115
NCATS Translator Knowledge Network Workflow Engine7 versions - Latest release: over 5 years ago - 2 dependent repositories - 32 downloads last month - 0 stars on GitHub - 1 maintainer
robokop-interfaces 0.91
Translator API11 versions - Latest release: about 6 years ago - 1 dependent repositories - 13 downloads last month - 1 stars on GitHub - 1 maintainer
refsig 1.0.5
Package for obtaining the referential signal from a set of iEEG data2 versions - Latest release: almost 6 years ago - 1 dependent repositories - 5 downloads last month - 1 stars on GitHub - 1 maintainer
reasoner 0.11
Reasoner common components7 versions - Latest release: over 6 years ago - 4 dependent repositories - 17 downloads last month - 0 stars on GitHub - 1 maintainer
greentranslator 0.42
Green Team BioMedical Data Translator31 versions - Latest release: about 7 years ago - 1 dependent repositories - 278 downloads last month - 0 stars on GitHub - 2 maintainers
gocats 1.2.1
A tool for categorizing Gene Ontology into subgraphs of user-defined emergent concepts9 versions - Latest release: 11 months ago - 1 dependent repositories - 33 downloads last month - 7 stars on GitHub - 3 maintainers
egegsignals 1.0.6
Package for processing EGG/EGEG signals7 versions - Latest release: over 5 years ago - 1 dependent repositories - 22 downloads last month - 1 maintainer
deepblink 0.1.4
Threshold independent detection and localization of diffraction-limited spots.13 versions - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 1.1 thousand downloads last month - 33 stars on GitHub - 2 maintainers
blackstone 0.1.15
A SpaCy pipeline and models for NLP on unstructured legal text.15 versions - Latest release: over 4 years ago - 7 dependent repositories - 126 downloads last month - 630 stars on GitHub - 1 maintainer
becas 1.0.3
becas API client for Python.4 versions - Latest release: about 11 years ago - 3 dependent repositories - 39 downloads last month - 6 stars on GitHub - 1 maintainer
greent 0.8
Green Team BioMedical Data Translator58 versions - Latest release: over 6 years ago - 3 dependent repositories - 134 downloads last month - 2 stars on GitHub - 1 maintainer
farabio 0.0.3
farabio - Deep learning for biomedical imaging3 versions - Latest release: over 2 years ago - 1 dependent repositories - 6 downloads last month - 50 stars on GitHub - 1 maintainer
augmentext 0.1.7
Text augmentation library for NLP with a focus on biomedical applications.8 versions - Latest release: almost 3 years ago - 87 downloads last month - 1 maintainer
koopa 0.0.13
Workflow for analysis of cellular microscopy data.13 versions - Latest release: about 1 year ago - 30 downloads last month - 1 stars on GitHub - 2 maintainers
pyradigm 0.6.5
Python-based data structure to improve handling of datasets in machine learning workflows12 versions - Latest release: about 1 year ago - 2 dependent packages - 5 dependent repositories - 364 downloads last month - 26 stars on GitHub - 1 maintainer
efishent 0.0.5
RNA FISH oligos/probes design tool.5 versions - Latest release: 11 months ago - 30 downloads last month - 8 stars on GitHub - 1 maintainer
medpalm 0.2.0 💰
MedPalm - Pytorch16 versions - Latest release: 3 months ago - 228 downloads last month - 219 stars on GitHub - 1 maintainer
ros 0.12
Ros Knowledge Network29 versions - Latest release: over 5 years ago - 3 dependent repositories - 623 downloads last month - 1 stars on GitHub - 1 maintainer
biosig 2.6.0
BioSig - tools for biomedical signal processing3 versions - Latest release: 3 months ago - 86 downloads last month - 1 maintainer
sri-dictionary-mt 0.1 removed
Finds Pharma drug names in a string1 version - Latest release: 12 months ago
Related Keywords
nlp
6
bioinformatics
5
clinical
5
ner
4
python
4
deep-learning
4
natural-language-processing
4
exposure
3
environmental
3
machine-learning
3
medical
3
named entity recognition
3
natural language processing
3
SpaCy
2
ontology
2
artificial intelligence
2
gpt4
2
tooling
2
spacy
2
mimic-iii
2
signals
2
transformers
2
drug
2
bio
2
pharma
2
pharmaceutical
2
knowledge
2
network
2
graph
2
EEG
2
signal
2
image analysis
2
machine
2
learning
2
cli
2
pytorch
2
augmentation
2
named entity linking
2
image
2
named-entity-recognition
2
spot detection
1
blob-detection
1
diffraction-limited-spots
1
publication
1
spot-detection
1
law
1
caselaw
1
lawtech
1
legaltech
1
spacy-models
1
becas
1
annotator
1
concept
1
identification
1
biomedical-imaging
1
datasets
1
models
1
text
1
text-mining
1
biomedical-engineering
1
brain-recordings
1
eeg
1
electroencephalography
1
ica
1
ieeg
1
intracranial
1
intracranial-eeg
1
noise
1
noise-reduction
1
referential-signal
1
seeg
1
signal-processing
1
virtual-reference
1
analysis
1
electrophysiology
1
electrogastrography
1
electrogastroenterography
1
processing
1
volumetric
1
generation
1
userfriendly
1
RNA probe design
1
fluorescence-microscopy-imaging
1
attention mechanism
1
multimodal
1
multimodal-deep-learning
1
multimodality
1
opensource
1
ECG
1
EKG
1
EMG
1
EOG
1
Polysomnography
1
ECoG
1
SCP
1
EDF
1
GDF
1
HEKA
1
CFS
1
ABF
1