pypi.org "clinical" keyword
View the packages on the pypi.org package registry that are tagged with the "clinical" keyword.
seq-pigeon 0.4.3
Pipeline tool for NGS data17 versions - Latest release: over 4 years ago - 1 dependent repositories - 289 downloads last month - 963 stars on GitHub - 1 maintainer
Top 7.8% on pypi.org
7 versions - Latest release: 12 months ago - 1 dependent package - 2 dependent repositories - 2.47 thousand downloads last month - 52 stars on GitHub - 1 maintainer
pytrials 1.0.0
Python wrapper around the clinicaltrials.gov API7 versions - Latest release: 12 months ago - 1 dependent package - 2 dependent repositories - 2.47 thousand downloads last month - 52 stars on GitHub - 1 maintainer
clintrials 0.1.4
clintrials is a library of clinical trial designs and methods in Python4 versions - Latest release: over 8 years ago - 2 dependent repositories - 112 downloads last month - 22 stars on GitHub - 1 maintainer
edc-analytics 0.1.4
Build analytical tables for clinicedc/edc projects5 versions - Latest release: 5 months ago - 1.69 thousand downloads last month - 1 maintainer
edc-auth 1.0.1
Authentication for clinicedc/edc projects162 versions - Latest release: 3 months ago - 8 dependent packages - 7 dependent repositories - 5.03 thousand downloads last month - 2 stars on GitHub - 2 maintainers
edc-egfr 1.0.1
Classes and utils to handle eGFR collection and reporting for clinicedc/edc projects26 versions - Latest release: about 1 month ago - 4 dependent packages - 2 dependent repositories - 2.57 thousand downloads last month - 0 stars on GitHub - 1 maintainer
edc-dx-review 1.0.1
Classes to manage review of HIV, DM and HTN diagnoses for clinicedc/edc projects51 versions - Latest release: 3 months ago - 1 dependent package - 2 dependent repositories - 2.78 thousand downloads last month - 0 stars on GitHub - 2 maintainers
edc-model-fields 1.0.0
Model field classes for clinicedc/edc projects28 versions - Latest release: 3 months ago - 6 dependent packages - 4 dependent repositories - 2.32 thousand downloads last month - 0 stars on GitHub - 1 maintainer
charger 0.5.2
Characterization of Germline variants4 versions - Latest release: over 7 years ago - 1 dependent repositories - 174 downloads last month - 94 stars on GitHub - 2 maintainers
hydra-genetics 3.1.1
Helper tools for use with hydra-genetics pipelines.64 versions - Latest release: 5 months ago - 23 dependent repositories - 2.83 thousand downloads last month - 3 stars on GitHub - 1 maintainer
medical-named-entity-recognition 0.2
Medical Named Entity Recognition library to find and resolve disease names in a string (disease n...2 versions - Latest release: 6 months ago - 76 downloads last month - 0 stars on GitHub - 1 maintainer
zensols.mimicsid 1.9.0
Use the MedSecId section annotations with MIMIC-III corpus parsing.13 versions - Latest release: 3 months ago - 1 dependent package - 258 downloads last month - 3 stars on GitHub - 1 maintainer
microsalt 3.0.1
Microbial Sequence Analysis and Loci-based Typing pipeline for use on NGS WGS data.1 version - Latest release: almost 5 years ago - 1 dependent repositories - 56 downloads last month - 2 stars on GitHub - 2 maintainers
pyluna-pathology 0.3.3
Transformation functions and services for multi-modal oncology data12 versions - Latest release: almost 3 years ago - 1 dependent repositories - 334 downloads last month - 34 stars on GitHub - 2 maintainers
pyluna-common 0.3.3
Transformation functions and services for multi-modal oncology data12 versions - Latest release: almost 3 years ago - 1 dependent repositories - 377 downloads last month - 34 stars on GitHub - 2 maintainers
pyluna-radiology 0.3.3
Transformation functions and services for multi-modal oncology data12 versions - Latest release: almost 3 years ago - 1 dependent repositories - 338 downloads last month - 34 stars on GitHub - 2 maintainers
pyluna 0.3.3
Transformation functions and services for multi-modal oncology data11 versions - Latest release: almost 3 years ago - 1 dependent repositories - 384 downloads last month - 34 stars on GitHub - 2 maintainers
pyluna-core 0.3.3
Transformation functions and services for multi-modal oncology data12 versions - Latest release: almost 3 years ago - 1 dependent repositories - 338 downloads last month - 34 stars on GitHub - 2 maintainers
ctseval 0.1.0
A package for evaluating clinical time series predictions1 version - Latest release: 7 months ago - 48 downloads last month - 0 stars on GitHub - 1 maintainer
greent 0.8
Green Team BioMedical Data Translator58 versions - Latest release: over 7 years ago - 3 dependent repositories - 939 downloads last month - 2 stars on GitHub - 1 maintainer
Top 7.4% on pypi.org
405 versions - Latest release: about 1 month ago - 4 dependent packages - 9 dependent repositories - 8.91 thousand downloads last month - 28 stars on GitHub - 2 maintainers
edc 1.0.9
EDC core modules for clinicedc/edc projects.405 versions - Latest release: about 1 month ago - 4 dependent packages - 9 dependent repositories - 8.91 thousand downloads last month - 28 stars on GitHub - 2 maintainers
clinical-research-study-manager 1.2.8.dev1
Program to manage some common clinical research tasks from the command line8 versions - Latest release: over 7 years ago - 1 dependent repositories - 173 downloads last month - 0 stars on GitHub - 1 maintainer
Top 6.6% on pypi.org
65 versions - Latest release: 4 months ago - 2 dependent packages - 4 dependent repositories - 2.34 thousand downloads last month - 50 stars on GitHub - 3 maintainers
chanjo 4.7.2
Coverage analysis tool for clinical sequencing65 versions - Latest release: 4 months ago - 2 dependent packages - 4 dependent repositories - 2.34 thousand downloads last month - 50 stars on GitHub - 3 maintainers
edc-appointment 1.0.7
Appointment module for clinicedc/edc projects221 versions - Latest release: about 2 months ago - 8 dependent packages - 36 dependent repositories - 6.49 thousand downloads last month - 0 stars on GitHub - 2 maintainers
fedbiomed 6.0.0
Collaborative learning for healthcare3 versions - Latest release: 2 months ago - 117 downloads last month - 48 stars on GitHub - 3 maintainers
robokop-interfaces 0.91
Translator API11 versions - Latest release: about 7 years ago - 1 dependent repositories - 174 downloads last month - 1 stars on GitHub - 1 maintainer
reasoner 0.11
Reasoner common components7 versions - Latest release: over 7 years ago - 4 dependent repositories - 138 downloads last month - 0 stars on GitHub - 1 maintainer
pteredactyl 1.0.7
Pteredactyl performs free-text redaction and masking of peronally identifiable information (PII) ...7 versions - Latest release: 10 months ago - 303 downloads last month - 11 stars on GitHub - 1 maintainer
edc-model-admin 1.0.1
Edc custom django ModelAdmin mixins, tags and templates for clinicedc/edc projects127 versions - Latest release: 3 months ago - 12 dependent packages - 18 dependent repositories - 3.88 thousand downloads last month - 1 stars on GitHub - 1 maintainer
edc-model-wrapper 0.3.13
Model wrappers that add dashboard methods for clinicedc/edc projects39 versions - Latest release: over 1 year ago - 6 dependent packages - 18 dependent repositories - 547 downloads last month - 1 stars on GitHub - 1 maintainer
chanjo-ccds 0.1
CCDS to Chanjo BED converter4 versions - Latest release: over 1 year ago - 2 dependent repositories - 68 downloads last month - 1 maintainer
dcurves 1.1.3
A Python package for Decision Curve Analysis to evaluate prediction models, molecular markers, an...17 versions - Latest release: about 1 month ago - 1 dependent repositories - 995 downloads last month - 29 stars on GitHub - 1 maintainer
zensols.dsprov 0.0.1
This library provides integrated MIMIC-III with discharge summary provenance of data annotations ...1 version - Latest release: almost 2 years ago - 29 downloads last month - 0 stars on GitHub - 1 maintainer
loinchpo 1.2.0
A library to transform loinc measurements into hpo terms.10 versions - Latest release: about 2 years ago - 1 dependent repositories - 172 downloads last month - 7 stars on GitHub - 1 maintainer
trialtracker 0.1.7
Methods to extract and transform clinical trial data7 versions - Latest release: over 2 years ago - 275 downloads last month - 2 stars on GitHub - 1 maintainer
ambition-screening 0.1.40
Determine a subject's eligibility for ambition/edc.37 versions - Latest release: over 5 years ago - 2 dependent repositories - 866 downloads last month - 1 stars on GitHub - 1 maintainer
sobolev-alignment 1.0.0
Sobolev alignment of deep probabilistic models for comparing single cell profiles1 version - Latest release: almost 2 years ago - 63 downloads last month - 5 stars on GitHub - 1 maintainer
simple-icd-10-cm-new 1.1.2
A simple python library for ICD-10-CM codes1 version - Latest release: about 2 years ago - 44 downloads last month - 64 stars on GitHub - 1 maintainer
torchmimic 0.0.6
MIMIC Benchmark in PyTorch.3 versions - Latest release: over 2 years ago - 88 downloads last month - 6 stars on GitHub - 1 maintainer
varify 0.8.0
Clinical DNA Sequencing Analysis and Data Discovery7 versions - Latest release: over 10 years ago - 2 dependent repositories - 109 downloads last month - 24 stars on GitHub - 1 maintainer
simple-icd-10-cm 1.2.0
A simple python library for ICD-10-CM codes10 versions - Latest release: over 1 year ago - 1 dependent repositories - 7.13 thousand downloads last month - 60 stars on GitHub - 1 maintainer
cohort-compare 0.3.2
A library of functions for comparing clinical cohorts to the populations of US counties16 versions - Latest release: about 5 years ago - 1 dependent repositories - 780 downloads last month - 1 stars on GitHub - 1 maintainer
mcl.sickbay 1.2.4 removed
🤢 Sickbay: Clinical data model for the Consortium for Molecular and Cellular Characterization of ...20 versions - Latest release: over 2 years ago - 2 dependent packages - 134 downloads last month - 2 stars on GitHub - 1 maintainer
mcl.infirmary 1.2.4 removed
🏥 Infirmary: an API for Clinical Data for the Consortium for Molecular and Cellular Characterizat...13 versions - Latest release: over 2 years ago - 73 downloads last month - 1 stars on GitHub - 1 maintainer
Related Keywords
trials
11
django
10
clinicedc
8
biomedical
7
python
6
data
6
pathology
5
radiology
5
clinical-trial-management-system
5
edc
5
clinical-trials
4
sequencing
4
nlp
3
model
3
mimic-iii
3
collection
3
environmental
3
exposure
3
cancer
3
pipeline
3
genomics
3
medical
2
tooling
2
natural-language-processing
2
variant
2
research
2
coverage
2
exome
2
completeness
2
diagnostics
2
eligibility
2
ICD-10-CM
2
ICD-10
2
icd
2
10
2
CM
2
codes
2
modification
2
icd-10
2
icd-10-clinical-modification
2
icd-10-cm
2
icd-codes
2
icd10
2
icd10cm
2
rest
2
api
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web
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lesions
2
bioinformatics
2
analytics
2
healthcare
2
bio
1
criteria
1
django-field-classes
1
oncology
1
ambition
1
cancer-genomics
1
cell-lines
1
deep-learning
1
drug-response
1
gene-expression
1
kernel-machine-learning
1
pre-clinical
1
scanpy
1
scrna-seq
1
scvi-tools
1
single-cell
1
wrapper
1
dashboard
1
andrew-vickers
1
consequences
1
decision-curve-analysis
1
decision-curves
1
net-benefit
1
rohan-singh
1
shaun-porwal
1
decision-curve
1
library
1
machine-learning
1
loinc
1
hpo
1
omop
1
trial
1
length-of-stay
1
phenotyping
1
pytorch
1
vcf
1
dna
1
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1
study
1
cohort
1
similarity
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pip
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variational-autoencoder
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