Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "neuroimaging" keyword
d2b-sidecarless-nii 1.0.0
Plugin for the d2b package to handle NIfTI images without sidecars1 version - Latest release: over 2 years ago - 1 dependent repositories - 5 downloads last month - 0 stars on GitHub - 2 maintainers
p3proc 0.1.2
The p3 fmri processing pipeline2 versions - Latest release: over 5 years ago - 1 dependent repositories - 29 downloads last month - 0 stars on GitHub - 4 maintainers
brainsimulator 0.5.4
Nuclear brain imaging synthesis with python4 versions - Latest release: over 6 years ago - 14 downloads last month - 0 stars on GitHub - 2 maintainers
nii-info 1.0.1 💰
Display NIfTI image information in a tabular format3 versions - Latest release: about 2 years ago - 1 dependent repositories - 18 downloads last month - 0 stars on GitHub - 2 maintainers
d2b-yaml 1.0.0
Plugin for the d2b package to YAML configuration files1 version - Latest release: over 2 years ago - 1 dependent repositories - 5 downloads last month - 0 stars on GitHub - 2 maintainers
d2b-compile 1.1.0
compile-dcm2bids-config plugin for the d2b package2 versions - Latest release: over 2 years ago - 1 dependent repositories - 12 downloads last month - 0 stars on GitHub - 2 maintainers
nidatasets 0.1.0
Convenient access to preprocessed brain imaging data.2 versions - Latest release: almost 2 years ago - 20 downloads last month - 0 stars on GitHub - 2 maintainers
vqt 0.1.3
Variable Q-Transform with PyTorch backend4 versions - Latest release: about 1 month ago - 73 downloads last month - 0 stars on GitHub - 2 maintainers
iptk 0.5.1
Python interface to the Imaging Pipeline Toolkit9 versions - Latest release: almost 6 years ago - 1 dependent repositories - 23 downloads last month - 0 stars on GitHub - 2 maintainers
bsl 0.6.4
Real-time framework for online neuroscience research through LSL-compatible devices.15 versions - Latest release: 8 months ago - 394 downloads last month - 0 stars on GitHub - 2 maintainers
nii-plot 1.0.0 💰
Plot mean NIfTI timeseries2 versions - Latest release: about 2 years ago - 1 dependent repositories - 11 downloads last month - 0 stars on GitHub - 1 maintainer
gradec 0.0.1rc5
Meta-analytic gradient decoding3 versions - Latest release: about 2 months ago - 31 downloads last month - 0 stars on GitHub - 1 maintainer
d2b-dcm2niix 1.0.0
Dcm2niix plugin for the d2b package1 version - Latest release: over 2 years ago - 1 dependent repositories - 6 downloads last month - 0 stars on GitHub - 2 maintainers
artbrain 1.0.1 💰
embed images into brain imaging data3 versions - Latest release: over 8 years ago - 2 dependent repositories - 28 downloads last month - 0 stars on GitHub - 2 maintainers
neuro-tools 0.1.1
Neuroimaging tools to help with BIDS, XNAT, workflows, etc.2 versions - Latest release: over 5 years ago - 1 dependent repositories - 20 downloads last month - 0 stars on GitHub - 2 maintainers
bids-events 0.0.5
A package to export events to be used in BIDS datasets.4 versions - Latest release: over 5 years ago - 1 dependent repositories - 28 downloads last month - 0 stars on GitHub - 1 maintainer
pydra-ants 0.0.5
Pydra tasks for ANTs5 versions - Latest release: 9 months ago - 25 downloads last month - 0 stars on GitHub - 4 maintainers
surface-spaces 0.1.0
Convenient conversion between surface spaces.1 version - Latest release: almost 2 years ago - 14 downloads last month - 0 stars on GitHub - 2 maintainers
cbicqc 2021.7.8 💰
MRI phantom quality control tool4 versions - Latest release: almost 3 years ago - 72 downloads last month - 0 stars on GitHub - 2 maintainers
clinica-pydra-ants 0.1.1
Pydra tasks for ANTs designed for Clinica2 versions - Latest release: 14 days ago - 210 downloads last month - 0 stars on GitHub - 2 maintainers
dcdf 0.1.8
Package to compute DCDF for nifti formatted MRI data.9 versions - Latest release: about 3 years ago - 1 dependent repositories - 26 downloads last month - 0 stars on GitHub - 1 maintainer
nimagen 0.0.3
Simple statistical and visualisation tool for neuroimaging genetics studies3 versions - Latest release: about 1 year ago - 26 downloads last month - 0 stars on GitHub - 2 maintainers
d2b-asl 2.0.0
Plugin for the d2b package to handle ASL data3 versions - Latest release: over 2 years ago - 1 dependent repositories - 30 downloads last month - 0 stars on GitHub - 2 maintainers
neurocaps 0.8.8
Co-activation patterns Python package8 versions - Latest release: about 2 months ago - 189 downloads last month - 0 stars on GitHub - 2 maintainers
nqdc 0.0.3
Download neuroimaging articles and extract text and stereotactic coordinates.3 versions - Latest release: over 1 year ago - 1 dependent repositories - 39 downloads last month - 0 stars on GitHub - 2 maintainers
pybicpl 0.5.1
Python interface for basic MNI .obj file format. Supports read, write, and calculations on a vert...10 versions - Latest release: over 1 year ago - 1 dependent repositories - 64 downloads last month - 0 stars on GitHub - 2 maintainers
dds4xnat 0.1
Renames the scan type for MR sessions stored on XNAT using the DeepDicomSort algorithm1 version - Latest release: almost 2 years ago - 9 downloads last month - 0 stars on GitHub - 1 maintainer
pycivet 0.1.2
Object-oriented CIVET bindings for Python22 versions - Latest release: over 1 year ago - 1 dependent repositories - 187 downloads last month - 0 stars on GitHub - 2 maintainers
d2b 1.4.2
Organize data in the BIDS format21 versions - Latest release: over 1 year ago - 6 dependent repositories - 215 downloads last month - 0 stars on GitHub - 2 maintainers
d2b-nth-of-type 1.0.1
Plugin for the d2b package to deterministically uniquify different acquisition runs3 versions - Latest release: about 2 years ago - 1 dependent repositories - 15 downloads last month - 0 stars on GitHub - 2 maintainers
simplebrainviewer 0.3.2
A simple brain viewer using matplotlib5 versions - Latest release: over 1 year ago - 1 dependent repositories - 16 downloads last month - 0 stars on GitHub - 1 maintainer
medimages4tests 0.3.3
Generates dummy medical image data with realistic headers to be used in image handling tests6 versions - Latest release: 6 months ago - 8 dependent packages - 1 dependent repositories - 1.25 thousand downloads last month - 0 stars on GitHub - 1 maintainer
alcoholic-tfe22540 0.1.12
Framework of my master thesis on the effect of withdrawal on the white matter of alcoholic patien...9 versions - Latest release: 10 months ago - 36 downloads last month - 0 stars on GitHub - 1 maintainer
voxface 2023.7.20 💰
Fast MRI face voxelator6 versions - Latest release: 10 months ago - 1 dependent repositories - 18 downloads last month - 0 stars on GitHub - 2 maintainers
memori 0.3.6
A python library for creating memoized data and code for neuroimaging pipelines19 versions - Latest release: about 1 year ago - 1 dependent package - 1 dependent repositories - 10 downloads last month - 0 stars on GitHub - 1 maintainer
compose-runner 0.4.6
A package for running neurosynth-compose analyses17 versions - Latest release: 3 months ago - 188 downloads last month - 0 stars on GitHub - 2 maintainers
qmvpa 0.54
my MVPA package9 versions - Latest release: over 5 years ago - 1 dependent repositories - 5 downloads last month - 0 stars on GitHub - 2 maintainers
mecons 0.0.3
MeCons project for measuring consciousness.1 version - Latest release: over 1 year ago - 5 downloads last month - 0 stars on GitHub - 2 maintainers
mapbrain 0.9.3
Brain image feature extraction and visualization1 version - Latest release: almost 6 years ago - 1 dependent repositories - 16 downloads last month - 0 stars on GitHub - 2 maintainers
bjdata 0.4.1
Binary JData and UBJSON encoder/decoder11 versions - Latest release: 7 months ago - 1 dependent repositories - 113 downloads last month - 1 stars on GitHub - 2 maintainers
pyhaze 0.1.3 💰
Fast smoothing of per-vertex data on triangular meshes.4 versions - Latest release: over 1 year ago - 31 downloads last month - 1 stars on GitHub - 1 maintainer
nipype-generate-fieldmaps 0.2.4 💰
Nipype workflow to generate fieldmaps from EPI acquisitions with differing phase-encoding directions6 versions - Latest release: over 2 years ago - 1 dependent repositories - 5 downloads last month - 1 stars on GitHub - 2 maintainers
dwiprep 0.1.5
DWIprep is a robust and easy-to-use preprocessing pipeline for diffusion-weighted imaging of vari...1 version - Latest release: over 2 years ago - 2 dependent repositories - 9 downloads last month - 1 stars on GitHub - 2 maintainers
mrdataset 0.4.4
MRdataset7 versions - Latest release: 2 months ago - 1 dependent package - 1 dependent repositories - 235 downloads last month - 1 stars on GitHub - 1 maintainer
pydra-templateflow 0.0.2
Pydra tasks for TemplateFlow2 versions - Latest release: about 1 year ago - 23 downloads last month - 1 stars on GitHub - 2 maintainers
pilab-binama 0.0.8
Functions to modify binary masks8 versions - Latest release: about 1 year ago - 42 downloads last month - 1 stars on GitHub - 2 maintainers
sihnpy 0.4.1
Study of inter-individual heterogeneity of neuroimaging in Python (SIHNpy)6 versions - Latest release: 12 months ago - 36 downloads last month - 1 stars on GitHub - 2 maintainers
pystorm3 0.1.8
Python implementation of some Brainstorm functions9 versions - Latest release: 3 days ago - 658 downloads last month - 1 stars on GitHub - 2 maintainers
convert-source 0.1.1
Converts and organises source MR image data-sets in accordance with the Brain Imaging Data Struct...15 versions - Latest release: about 3 years ago - 1 dependent repositories - 15 downloads last month - 1 stars on GitHub - 2 maintainers
niutils 0.7.0
Various utilities to fast-track some boring python coding.12 versions - Latest release: 9 days ago - 1 dependent repositories - 218 downloads last month - 1 stars on GitHub - 2 maintainers
fslfeatsetup 0.4.8 removed
a small set of tools for create FSL FEAT .fsf configuration files15 versions - Latest release: almost 3 years ago - 1 dependent repositories - 130 downloads last month - 1 stars on GitHub - 2 maintainers
nilearn-extra 0.1.1
Drop-in extra functionalities for nilearn (statistics for neuroimaging in Python)2 versions - Latest release: almost 2 years ago - 16 downloads last month - 1 stars on GitHub - 2 maintainers
dstrf 0.2
MEG/EEG source localization tool2 versions - Latest release: over 4 years ago - 1 dependent repositories - 14 downloads last month - 1 stars on GitHub - 1 maintainer
padre 2.5.5
participant data repository21 versions - Latest release: about 8 years ago - 2 dependent repositories - 83 downloads last month - 1 stars on GitHub - 2 maintainers
dyneusr-fire 0.0.3
A command line interface for DyNeuSR2 versions - Latest release: almost 5 years ago - 1 dependent repositories - 11 downloads last month - 2 stars on GitHub - 2 maintainers
neurodatapub 0.4
NeuroDataPub: Tool built for publication of BIDS datasets of the NCCR-Synapsy4 versions - Latest release: over 2 years ago - 1 dependent repositories - 28 downloads last month - 2 stars on GitHub - 2 maintainers
bcblib 0.3.4
32 versions - Latest release: about 1 year ago - 1 dependent repositories - 154 downloads last month - 2 stars on GitHub - 2 maintainersniatlas 0.0.1
atlas classes and methods for neuroimaging1 version - Latest release: almost 5 years ago - 1 dependent repositories - 17 downloads last month - 2 stars on GitHub - 2 maintainers
neural-fmri 1.2.5
Neuroimaging Analysis Library31 versions - Latest release: over 7 years ago - 3 dependent repositories - 77 downloads last month - 2 stars on GitHub - 2 maintainers
nisupply 2023.3.10
A python module for dealing with unstructured or semi-structured neuroimaging datasets which do n...3 versions - Latest release: about 1 year ago - 93 downloads last month - 2 stars on GitHub - 2 maintainers
lesion-metrics 0.1.12
metrics for evaluating lesion segmentations13 versions - Latest release: over 2 years ago - 1 dependent repositories - 78 downloads last month - 2 stars on GitHub - 2 maintainers
gradiator 0.0.1.dev14
turn covariance matrices into brain gradients1 version - Latest release: over 1 year ago - 14 downloads last month - 2 stars on GitHub - 1 maintainer
pydra-bids 0.0.10
Pydra tasks for BIDS I/O10 versions - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 260 downloads last month - 2 stars on GitHub - 3 maintainers
nidmviewer 0.1.3 💰
command line or server tool to view or compare nidm results.3 versions - Latest release: almost 8 years ago - 2 dependent repositories - 10 downloads last month - 3 stars on GitHub - 2 maintainers
niphlem 0.0.3
Physiological Log Extraction for Modelling in Neuroimaging3 versions - Latest release: about 2 years ago - 1 dependent repositories - 17 downloads last month - 3 stars on GitHub - 2 maintainers
pydra-fsl 0.0.22
Pydra tasks for FSL22 versions - Latest release: 8 months ago - 1 dependent package - 448 downloads last month - 3 stars on GitHub - 3 maintainers
face-rhythm 0.2.5
A pipeline for analysis of facial behavior using optical flow10 versions - Latest release: 15 days ago - 134 downloads last month - 3 stars on GitHub - 2 maintainers
evaler 0.0.2
Evaler.2 versions - Latest release: over 2 years ago - 1 dependent repositories - 26 downloads last month - 3 stars on GitHub - 1 maintainer
neuroboros 0.1.7
Neuroimaging analysis in Python9 versions - Latest release: 3 months ago - 25 downloads last month - 3 stars on GitHub - 2 maintainers
conpagnon 2.0.11
Easy Resting State Analysis with Python11 versions - Latest release: almost 4 years ago - 45 downloads last month - 3 stars on GitHub - 2 maintainers
scdn 0.0.2
Estimating high dimensional ODE models from convoluted observations with an application to fMRI3 versions - Latest release: almost 6 years ago - 1 dependent repositories - 15 downloads last month - 3 stars on GitHub - 2 maintainers
mnisiscom 0.4.0
A simple command line tool and GUI for computing subtraction ictal SPECT coregistered to MRI (SIS...1 version - Latest release: over 4 years ago - 1 dependent repositories - 18 downloads last month - 3 stars on GitHub - 1 maintainer
clinica-pydra-fsl 0.1.0
Pydra tasks for FSL designed for Clinica1 version - Latest release: 10 days ago - 156 downloads last month - 3 stars on GitHub - 5 maintainers
hypercoil 0.1.0.dev1
Differentiable programming for neuroimaging analysis1 version - Latest release: 9 months ago - 2 dependent packages - 1 dependent repositories - 6 downloads last month - 4 stars on GitHub - 2 maintainers
pipetography 0.3.12
Pre/Post-processing pipeline for tractography wrapped around nipype and mrtrix319 versions - Latest release: over 2 years ago - 1 dependent repositories - 149 downloads last month - 4 stars on GitHub - 4 maintainers
omnineuro 2023.2.1
omni is a Python/C++17 library for image preprocessing in neuroimaging8 versions - Latest release: over 1 year ago - 70 downloads last month - 4 stars on GitLab.com - 2 maintainers
phys2cvr 0.18.3
Python library to generate regressors for and compute Cerebrovascular Reactivity and lag maps.44 versions - Latest release: 8 months ago - 1 dependent repositories - 305 downloads last month - 4 stars on GitHub - 2 maintainers
freesurfer-volume-reader 2.1.1
Python script & library to read hippocampal subfield volumescomputed by Freesurfer & ASHS8 versions - Latest release: almost 3 years ago - 1 dependent repositories - 85 downloads last month - 4 stars on GitHub - 2 maintainers
brainview 0.0.1 💰
Visualize morphometry neuroimaging data on 3D brain meshes.1 version - Latest release: over 5 years ago - 1 dependent repositories - 21 downloads last month - 4 stars on GitHub - 2 maintainers
brainart 1.0.9 💰
make images out of brain imaging data12 versions - Latest release: almost 7 years ago - 2 dependent repositories - 42 downloads last month - 4 stars on GitHub - 2 maintainers
pyrobex 0.4.3
python bindings for ROBEX brain extraction7 versions - Latest release: over 1 year ago - 1 dependent repositories - 73 downloads last month - 4 stars on GitHub - 1 maintainer
xnat4tests 0.3.10
Creates basic XNAT instance for API tests21 versions - Latest release: 6 months ago - 3 dependent packages - 1 dependent repositories - 222 downloads last month - 4 stars on GitHub - 1 maintainer
pathmatcher 1.8.1
Regular Expression Path Matcher - Easily batch manipulate folders and files trees with regular ex...6 versions - Latest release: about 1 year ago - 1 dependent repositories - 45 downloads last month - 4 stars on GitHub - 2 maintainers
clinica-pydra-freesurfer 0.1.0
Pydra tasks for FreeSurfer designed for Clinica1 version - Latest release: 10 days ago - 157 downloads last month - 5 stars on GitHub - 6 maintainers
pydra-freesurfer 0.0.11
Pydra tasks for FreeSurfer11 versions - Latest release: about 1 year ago - 1 dependent package - 1 dependent repositories - 445 downloads last month - 5 stars on GitHub - 3 maintainers
warpkit 0.1.1
A python library for neuroimaging transformations3 versions - Latest release: 5 months ago - 18 downloads last month - 5 stars on GitHub - 2 maintainers
ascnii 0.0.1.dev21
View brain images in terminal using ASCII characters12 versions - Latest release: 17 days ago - 90 downloads last month - 5 stars on GitHub - 2 maintainers
bidsmreye 0.3.1
bids app using deepMReye to decode eye motion for fMRI time series data4 versions - Latest release: over 1 year ago - 37 downloads last month - 5 stars on GitHub - 1 maintainer
pylabber 0.1.0
A Django app to manage neuroscience research6 versions - Latest release: almost 4 years ago - 1 dependent repositories - 60 downloads last month - 6 stars on GitHub - 1 maintainer
neurolang 0.1a19
"NeuroLang: Probabilistic Logic Programming for NeuroScience Research"6 versions - Latest release: 7 months ago - 1 dependent repositories - 49 downloads last month - 6 stars on GitHub - 1 maintainer
nondefaced-detector 0.1.3
A package to detect if an MRI Volume has been defaced.4 versions - Latest release: about 3 years ago - 1 dependent repositories - 8 downloads last month - 6 stars on GitHub - 2 maintainers
django-dicom 0.0.4
A simple Django app to manage DICOM files.4 versions - Latest release: over 4 years ago - 1 dependent repositories - 64 downloads last month - 6 stars on GitHub - 2 maintainers
django-mri 0.0.4
A reusable Django app to manage MRI data.4 versions - Latest release: over 4 years ago - 1 dependent repositories - 48 downloads last month - 7 stars on GitHub - 2 maintainers
photonai-neuro 0.2.0
Add-on module to simplify machine learning analyses for multimodal Magnetic Resonance Imaging (MR...3 versions - Latest release: over 1 year ago - 1 dependent repositories - 25 downloads last month - 7 stars on GitHub - 6 maintainers
mni-to-atlas 1.1.0
A simple Python-based tool for finding brain atlas regions based on MNI coordinates.6 versions - Latest release: 5 months ago - 29 downloads last month - 7 stars on GitHub - 2 maintainers
nisnap 0.4.1
nisnap17 versions - Latest release: 10 months ago - 1 dependent package - 1 dependent repositories - 98 downloads last month - 8 stars on GitHub - 4 maintainers
borsar 0.1
tools for electrophysiological analysis, especially cluster-based tests.1 version - Latest release: 6 months ago - 1 dependent package - 27 downloads last month - 8 stars on GitHub - 2 maintainers
nobrainer-zoo 0.2.0
A framework for inference and re-training of pretrained neuroimaging models1 version - Latest release: over 1 year ago - 6 downloads last month - 8 stars on GitHub - 2 maintainers
hedtools 0.4.0
HED validation, summary, and analysis tools.5 versions - Latest release: 7 months ago - 3 dependent repositories - 2.41 thousand downloads last month - 8 stars on GitHub - 3 maintainers
niseq 0.0.2
Group sequential tests for neuroimaging3 versions - Latest release: over 1 year ago - 1 dependent repositories - 23 downloads last month - 8 stars on GitHub - 2 maintainers
Related Keywords
neuroscience
74
python
66
mri
37
fmri
37
brain
36
bids
27
nifti
20
machine-learning
19
brain-imaging
16
eeg
15
statistics
12
fsl
12
meg
11
dicom
11
MRI
10
freesurfer
10
electroencephalography
9
machine learning
9
pydra
9
medical-imaging
9
MEG
9
mri-images
9
EEG
9
surface
8
bids-format
7
visualization
7
deep-learning
7
magnetoencephalography
7
nii
7
research
7
python3
7
dcm2niix
7
quality-control
6
hacktoberfest
6
cortex
6
meta-analysis
6
dcm
6
nilearn
6
dti
5
fMRI
5
electrocorticography
5
deep learning
5
BIDS
5
jpeg
5
nitrc
5
registration
5
image-processing
5
mricrogl
5
nifti-format
5
dicom-images
5
brainweb
5
gz
5
pet
5
jpeg-image
5
workflows
4
analysis
4
nibabel
4
fmri-preprocessing
4
nipype
4
plugin
4
d2b
4
preprocessing
4
neuroinformatics
4
ants
4
pytorch
4
Neuroimaging
4
scikit-learn
4
imaging
4
segmentation
4
cli
4
tool
4
normalization
3
data
3
voxel
3
harmonization
3
combat
3
data-standards
3
feature-extraction
3
brain-networks
3
skull-stripping
3
mesh
3
learning
3
anatomical-mri
3
ECoG
3
science
3
ecog
3
brain-connectivity
3
diffusion-mri
3
tractography
3
repository
3
reader
3
fmri-data-analysis
3
brain-extraction
3
spm
3
FSL
3
django
3
cluster
3
DICOM
3
afni
3
vertex
3